RNA–Protein interactions for RNA: ENST00000342579.7

BPTF-204, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene BPTF, Length 4,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-204ENST00000342579 CNTN2Q02246 1040 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 SHROOM1Q2M3G4 852 aaPredicted RBP4.76□□□□□ -1.65
BPTF-204ENST00000342579 LETM2Q2VYF4 491 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 CHRDL2Q6WN34 429 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 TRIB2Q92519 343 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 RNPC3Q96LT9 517 aaKnown RBP4.76□□□□□ -1.65
BPTF-204ENST00000342579 GAS2L1Q99501 681 aaPredicted RBP4.76□□□□□ -1.65
BPTF-204ENST00000342579 SBF1O95248 1867 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 GOLGB1Q14789 3259 aaKnown RBP4.76□□□□□ -1.65
BPTF-204ENST00000342579 COL4A5P29400 1685 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 SNED1Q8TER0 1413 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 CASP8AP2Q9UKL3 1982 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 PEX14O75381 377 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 STAM2O75886 525 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 RFX1P22670 979 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 RPS6KB1P23443 525 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 NFX1Q12986 1120 aaKnown RBP4.76□□□□□ -1.65
BPTF-204ENST00000342579 SEMA3FQ13275 785 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 MTMR1Q13613 665 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 GRB14Q14449 540 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 XRRA1Q6P2D8 792 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 CXCL17Q6UXB2 119 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 RUFY3Q7L099 469 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 MIER3Q7Z3K6 550 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 CMTR1Q8N1G2 835 aaKnown RBP4.76□□□□□ -1.65
BPTF-204ENST00000342579 MICALL1Q8N3F8 863 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 RNF169Q8NCN4 708 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 MICAL1Q8TDZ2 1067 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 GPKOWQ92917 476 aaPredicted RBP eCLIP4.76□□□□□ -1.65
BPTF-204ENST00000342579 FAM49AQ9H0Q0 323 aaPredicted RBP4.76□□□□□ -1.65
BPTF-204ENST00000342579 SUGCTQ9HAC7 445 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 LIMCH1Q9UPQ0 1083 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.76□□□□□ -1.65
BPTF-204ENST00000342579 COL2A1P02458 1487 aaPredicted RBP4.76□□□□□ -1.65
BPTF-204ENST00000342579 UTRNP46939 3433 aa4.76□□□□□ -1.65
BPTF-204ENST00000342579 DNM1LO00429 736 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 FIBPO43427 364 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 EPB41L2O43491 1005 aaKnown RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 CCND3P30281 292 aaPredicted RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 ALDH5A1P51649 535 aaPredicted RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 AP3B2Q13367 1082 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 RRP1BQ14684 758 aaKnown RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 PRR16Q569H4 304 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 PDXDC2PQ6P474 469 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 APOA5Q6Q788 366 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 OTUD6AQ7L8S5 288 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 METTL16Q86W50 562 aaKnown RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 PPM1EQ8WY54 764 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 ATP6V0A1Q93050 837 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 TAAR1Q96RJ0 339 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 LARP6Q9BRS8 491 aaKnown RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 TEKT3Q9BXF9 490 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 USP26Q9BXU7 913 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 TRIM6Q9C030 488 aaPredicted RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 SLC28A3Q9HAS3 691 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 CEP131Q9UPN4 1083 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 NFIBO00712 420 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 SH2B2O14492 632 aaPredicted RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 PLA2G6O60733 806 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 NR1I2O75469 434 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 KRT2P35908 639 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 BEX3Q00994 111 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 TLE2Q04725 743 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 GALNT17Q6IS24 598 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 MAMSTRQ6ZN01 415 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 DEFB128Q7Z7B8 93 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 CCDC83Q8IWF9 413 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 HS6ST3Q8IZP7 471 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 SEPT1Q8WYJ6 367 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 FAM193BQ96PV7 902 aaPredicted RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 ZNF577Q9BSK1 485 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 PCDHA6Q9UN73 950 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 PCDHA8Q9Y5H6 950 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 ATP6V1DQ9Y5K8 247 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 DDX60Q8IY21 1712 aaKnown RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 ADGRA2Q96PE1 1338 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 SYNGAP1Q96PV0 1343 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 POLR2AP24928 1970 aaKnown RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 POTEFA5A3E0 1075 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 RPLP2P05387 115 aaKnown RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 ASGR1P07306 291 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 PSAPP07602 524 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 MARK3P27448 753 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 MYBPC2Q14324 1141 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 KCNA10Q16322 511 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 LARP1BQ659C4 914 aaKnown RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 USP17L6PQ6QN14 398 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 STAG2Q8N3U4 1231 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 NPLOC4Q8TAT6 608 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 NOC3LQ8WTT2 800 aaKnown RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 SPZ1Q9BXG8 430 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 JMJD4Q9H9V9 463 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 CYP39A1Q9NYL5 469 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 DICER1Q9UPY3 1922 aaKnown RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 PALM3A6NDB9 673 aaPredicted RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 FGBP02675 491 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 CLTBP09497 229 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 TGFB3P10600 412 aa4.75□□□□□ -1.65
BPTF-204ENST00000342579 ADD1P35611 737 aaKnown RBP4.75□□□□□ -1.65
BPTF-204ENST00000342579 ARHGAP4P98171 946 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms