RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 PCDHA8Q9Y5H6 950 aa14.72□□□□□ -0.05
SRSF3-201ENST00000339436 SYNRGQ9UMZ2 1314 aa14.72□□□□□ -0.05
SRSF3-201ENST00000339436 FOSP01100 380 aaPredicted RBP14.71□□□□□ -0.05
SRSF3-201ENST00000339436 TFRCP02786 760 aaKnown RBP14.71□□□□□ -0.05
SRSF3-201ENST00000339436 MYCLP12524 364 aaPredicted RBP14.71□□□□□ -0.05
SRSF3-201ENST00000339436 SMPD1P17405 629 aa14.71□□□□□ -0.05
SRSF3-201ENST00000339436 MRPS9P82933 396 aaKnown RBP14.71□□□□□ -0.05
SRSF3-201ENST00000339436 TNFAIP2Q03169 654 aa14.71□□□□□ -0.05
SRSF3-201ENST00000339436 NPY5RQ15761 445 aa14.71□□□□□ -0.05
SRSF3-201ENST00000339436 ANKLE1Q8NAG6 615 aa14.71□□□□□ -0.05
SRSF3-201ENST00000339436 BICD2Q8TD16 824 aa14.71□□□□□ -0.05
SRSF3-201ENST00000339436 PGBD1Q96JS3 809 aa14.71□□□□□ -0.05
SRSF3-201ENST00000339436 ALG1Q9BT22 464 aa14.71□□□□□ -0.05
SRSF3-201ENST00000339436 EHMT1Q9H9B1 1298 aa14.71□□□□□ -0.05
SRSF3-201ENST00000339436 TMEM260Q9NX78 707 aa14.71□□□□□ -0.05
SRSF3-201ENST00000339436 GNEQ9Y223 722 aaKnown RBP14.71□□□□□ -0.05
SRSF3-201ENST00000339436 WDR81Q562E7 1941 aa14.71□□□□□ -0.05
SRSF3-201ENST00000339436 SCN10AQ9Y5Y9 1956 aa14.71□□□□□ -0.05
SRSF3-201ENST00000339436 ADAMTS4O75173 837 aa14.71□□□□□ -0.06
SRSF3-201ENST00000339436 STAM2O75886 525 aa14.71□□□□□ -0.06
SRSF3-201ENST00000339436 RGS20O76081 388 aa14.71□□□□□ -0.06
SRSF3-201ENST00000339436 FARP2O94887 1054 aaPredicted RBP14.71□□□□□ -0.06
SRSF3-201ENST00000339436 XBP1P17861 261 aa14.71□□□□□ -0.06
SRSF3-201ENST00000339436 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.06
SRSF3-201ENST00000339436 NLRP5P59047 1200 aa14.71□□□□□ -0.06
SRSF3-201ENST00000339436 DUSP28Q4G0W2 176 aa14.71□□□□□ -0.06
SRSF3-201ENST00000339436 IQSEC1Q6DN90 963 aa14.71□□□□□ -0.06
SRSF3-201ENST00000339436 GALNT17Q6IS24 598 aa14.71□□□□□ -0.06
SRSF3-201ENST00000339436 XRRA1Q6P2D8 792 aa14.71□□□□□ -0.06
SRSF3-201ENST00000339436 UBE2Q1Q7Z7E8 422 aa14.71□□□□□ -0.06
SRSF3-201ENST00000339436 TLK2Q86UE8 772 aa14.71□□□□□ -0.06
SRSF3-201ENST00000339436 DAGLBQ8NCG7 672 aa14.71□□□□□ -0.06
SRSF3-201ENST00000339436 RASGRP4Q8TDF6 673 aa14.71□□□□□ -0.06
SRSF3-201ENST00000339436 WDR11Q9BZH6 1224 aa14.71□□□□□ -0.06
SRSF3-201ENST00000339436 UPF3AQ9H1J1 476 aaKnown RBP14.71□□□□□ -0.06
SRSF3-201ENST00000339436 PCDHA4Q9UN74 947 aa14.71□□□□□ -0.06
SRSF3-201ENST00000339436 DNM1LO00429 736 aa14.7□□□□□ -0.06
SRSF3-201ENST00000339436 ARIH2O95376 493 aa14.7□□□□□ -0.06
SRSF3-201ENST00000339436 PGK1P00558 417 aa14.7□□□□□ -0.06
SRSF3-201ENST00000339436 PTGS1P23219 599 aa14.7□□□□□ -0.06
SRSF3-201ENST00000339436 SREBF1P36956 1147 aa14.7□□□□□ -0.06
SRSF3-201ENST00000339436 HMGN5P82970 282 aaKnown RBP14.7□□□□□ -0.06
SRSF3-201ENST00000339436 TTLL4Q14679 1199 aa14.7□□□□□ -0.06
SRSF3-201ENST00000339436 TMEM63BQ5T3F8 832 aa14.7□□□□□ -0.06
SRSF3-201ENST00000339436 GJC2Q5T442 439 aaPredicted RBP14.7□□□□□ -0.06
SRSF3-201ENST00000339436 JAKMIP3Q5VZ66 844 aa14.7□□□□□ -0.06
SRSF3-201ENST00000339436 MCTP2Q6DN12 878 aa14.7□□□□□ -0.06
SRSF3-201ENST00000339436 CCDC62Q6P9F0 684 aa14.7□□□□□ -0.06
SRSF3-201ENST00000339436 SEPT14Q6ZU15 432 aa14.7□□□□□ -0.06
SRSF3-201ENST00000339436 DIS3LQ8TF46 1054 aaKnown RBP14.7□□□□□ -0.06
SRSF3-201ENST00000339436 INPP4AQ96PE3 977 aaPredicted RBP14.7□□□□□ -0.06
SRSF3-201ENST00000339436 PHF20Q9BVI0 1012 aa14.7□□□□□ -0.06
SRSF3-201ENST00000339436 GJB4Q9NTQ9 266 aa14.7□□□□□ -0.06
SRSF3-201ENST00000339436 KCNJ14Q9UNX9 436 aa14.7□□□□□ -0.06
SRSF3-201ENST00000339436 M0R2N6 131 aa14.69□□□□□ -0.06
SRSF3-201ENST00000339436 GJA9P57773 515 aa14.69□□□□□ -0.06
SRSF3-201ENST00000339436 LRRC41Q15345 812 aa14.69□□□□□ -0.06
SRSF3-201ENST00000339436 GNPTABQ3T906 1256 aa14.69□□□□□ -0.06
SRSF3-201ENST00000339436 IFFO2Q5TF58 517 aa14.69□□□□□ -0.06
SRSF3-201ENST00000339436 MYADML2A6NDP7 307 aa14.68□□□□□ -0.06
SRSF3-201ENST00000339436 NKRFO15226 690 aaKnown RBP eCLIP14.68□□□□□ -0.06
SRSF3-201ENST00000339436 TXNP10599 105 aaKnown RBP14.68□□□□□ -0.06
SRSF3-201ENST00000339436 CST5P28325 142 aaPredicted RBP14.68□□□□□ -0.06
SRSF3-201ENST00000339436 RGS19P49795 217 aa14.68□□□□□ -0.06
SRSF3-201ENST00000339436 NKX3-2P78367 333 aa14.68□□□□□ -0.06
SRSF3-201ENST00000339436 ARHGAP4P98171 946 aa14.68□□□□□ -0.06
SRSF3-201ENST00000339436 RNF180Q86T96 592 aa14.68□□□□□ -0.06
SRSF3-201ENST00000339436 BLIDQ8IZY5 108 aa14.68□□□□□ -0.06
SRSF3-201ENST00000339436 ARRDC4Q8NCT1 418 aa14.68□□□□□ -0.06
SRSF3-201ENST00000339436 CRYGNQ8WXF5 182 aa14.68□□□□□ -0.06
SRSF3-201ENST00000339436 ZFP91Q96JP5 570 aaPredicted RBP14.68□□□□□ -0.06
SRSF3-201ENST00000339436 Q9Y3F1 56 aa14.68□□□□□ -0.06
SRSF3-201ENST00000339436 MRVI1Q9Y6F6 885 aa14.68□□□□□ -0.06
SRSF3-201ENST00000339436 KBTBD13C9JR72 458 aa14.67□□□□□ -0.06
SRSF3-201ENST00000339436 CTAGE5O15320 804 aa14.67□□□□□ -0.06
SRSF3-201ENST00000339436 C6orf222P0C671 652 aaPredicted RBP14.67□□□□□ -0.06
SRSF3-201ENST00000339436 ITGB5P18084 799 aa14.67□□□□□ -0.06
SRSF3-201ENST00000339436 SEMA3FQ13275 785 aa14.67□□□□□ -0.06
SRSF3-201ENST00000339436 KCNV1Q6PIU1 500 aa14.67□□□□□ -0.06
SRSF3-201ENST00000339436 KLHDC9Q8NEP7 349 aa14.67□□□□□ -0.06
SRSF3-201ENST00000339436 SPC25Q9HBM1 224 aa14.67□□□□□ -0.06
SRSF3-201ENST00000339436 DDX41Q9UJV9 622 aaKnown RBP14.67□□□□□ -0.06
SRSF3-201ENST00000339436 MYH9P35579 1960 aaKnown RBP14.66□□□□□ -0.06
SRSF3-201ENST00000339436 FIBPO43427 364 aa14.66□□□□□ -0.06
SRSF3-201ENST00000339436 MYCNP04198 464 aaPredicted RBP14.66□□□□□ -0.06
SRSF3-201ENST00000339436 COL6A1P12109 1028 aa14.66□□□□□ -0.06
SRSF3-201ENST00000339436 UBA1P22314 1058 aaKnown RBP14.66□□□□□ -0.06
SRSF3-201ENST00000339436 ICAM3P32942 547 aa14.66□□□□□ -0.06
SRSF3-201ENST00000339436 FOSBP53539 338 aa14.66□□□□□ -0.06
SRSF3-201ENST00000339436 IRX5P78411 483 aaPredicted RBP14.66□□□□□ -0.06
SRSF3-201ENST00000339436 TRIM29Q14134 588 aa14.66□□□□□ -0.06
SRSF3-201ENST00000339436 FSCN1Q16658 493 aaKnown RBP14.66□□□□□ -0.06
SRSF3-201ENST00000339436 LY6KQ17RY6 165 aa14.66□□□□□ -0.06
SRSF3-201ENST00000339436 OR6J1Q8NGC5 347 aa14.66□□□□□ -0.06
SRSF3-201ENST00000339436 COPS5Q92905 334 aa14.66□□□□□ -0.06
SRSF3-201ENST00000339436 GPRASP2Q96D09 838 aa14.66□□□□□ -0.06
SRSF3-201ENST00000339436 PAWRQ96IZ0 340 aaKnown RBP14.66□□□□□ -0.06
SRSF3-201ENST00000339436 AP5M1Q9H0R1 490 aa14.66□□□□□ -0.06
SRSF3-201ENST00000339436 RTEL1Q9NZ71 1219 aa14.66□□□□□ -0.06
SRSF3-201ENST00000339436 UBIAD1Q9Y5Z9 338 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms