RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SYCE1Q8N0S2 351 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 MIEF2Q96C03 454 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 L3MBTL1Q9Y468 752 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 MAP3K4Q9Y6R4 1608 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 LRRC53A6NM62 1247 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 RASGRF2O14827 1237 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 DAPK3O43293 454 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 THAP12O43422 761 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 ACSL3O95573 720 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 PHLDB3Q6NSJ2 640 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 LACRTQ9GZZ8 138 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 NDST4Q9H3R1 872 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 ERBB3P21860 1342 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 REREQ9P2R6 1566 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 TBC1D10CQ8IV04 446 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 DYDC2Q96IM9 177 aa14.46□□□□□ -0.09
COL2A1-201ENST00000337299 BLIDQ8IZY5 108 aa14.46□□□□□ -0.1
COL2A1-201ENST00000337299 RDH13Q8NBN7 331 aa14.46□□□□□ -0.1
COL2A1-201ENST00000337299 SPDYE1Q8NFV5 336 aaPredicted RBP14.46□□□□□ -0.1
COL2A1-201ENST00000337299 CUL5Q93034 780 aa14.46□□□□□ -0.1
COL2A1-201ENST00000337299 STAMBPL1Q96FJ0 436 aa14.46□□□□□ -0.1
COL2A1-201ENST00000337299 PNPLA6Q8IY17 1366 aa14.46□□□□□ -0.1
COL2A1-201ENST00000337299 F8W031 263 aaPredicted RBP14.45□□□□□ -0.1
COL2A1-201ENST00000337299 SEMA3EO15041 775 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 CYTH2Q99418 400 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 ZMYND12Q9H0C1 365 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 VCPKMTQ9H867 229 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 VPS37BQ9H9H4 285 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 ARHGAP42A6NI28 874 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 E9PCH4 1651 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 SYF2O95926 243 aaKnown RBP14.45□□□□□ -0.1
COL2A1-201ENST00000337299 IGKV5-2P06315 115 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 GNA11P29992 359 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 TMED1Q13445 227 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 BIRC3Q13489 604 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 CCDC174Q6PII3 467 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 UBN2Q6ZU65 1347 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 PDCD7Q8N8D1 485 aaKnown RBP14.45□□□□□ -0.1
COL2A1-201ENST00000337299 ARAP3Q8WWN8 1544 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 AZI2Q9H6S1 392 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 KANSL2Q9H9L4 492 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 ZNF287Q9HBT7 754 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 AATFQ9NY61 560 aaKnown RBP eCLIP14.45□□□□□ -0.1
COL2A1-201ENST00000337299 AMACRQ9UHK6 382 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 POC1B-GALNT4F8VUJ3 575 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 GNPATO15228 680 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 ANP32DO95626 131 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 TMEM132AQ24JP5 1023 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 CYP4F22Q6NT55 531 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 FOXP4Q8IVH2 680 aaPredicted RBP14.45□□□□□ -0.1
COL2A1-201ENST00000337299 MYOCDQ8IZQ8 938 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 CRACR2BQ8N4Y2 399 aaPredicted RBP14.45□□□□□ -0.1
COL2A1-201ENST00000337299 TAB3Q8N5C8 712 aaPredicted RBP14.45□□□□□ -0.1
COL2A1-201ENST00000337299 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.45□□□□□ -0.1
COL2A1-201ENST00000337299 TAF1DQ9H5J8 278 aaPredicted RBP14.45□□□□□ -0.1
COL2A1-201ENST00000337299 RNF14Q9UBS8 474 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 PNMA2Q9UL42 364 aa14.45□□□□□ -0.1
COL2A1-201ENST00000337299 ZSCAN5CA6NGD5 496 aaPredicted RBP14.44□□□□□ -0.1
COL2A1-201ENST00000337299 SKIP12755 728 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 KLK7P49862 253 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 CACNB1Q02641 598 aaPredicted RBP14.44□□□□□ -0.1
COL2A1-201ENST00000337299 VCX3BQ9H321 246 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 VCX3AQ9NNX9 186 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 ATP7BP35670 1465 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 WDR91A4D1P6 747 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 PP2D1A8MPX8 630 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 CCNE1P24864 410 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 SLC1A4P43007 532 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 SLMAPQ14BN4 828 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 TRAPPC11Q7Z392 1133 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 BATF3Q9NR55 127 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 LIMA1Q9UHB6 759 aaKnown RBP14.44□□□□□ -0.1
COL2A1-201ENST00000337299 MED23Q9ULK4 1368 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 PSMD14O00487 310 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 AP1G2O75843 785 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 ABL1P00519 1130 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 FGGP02679 453 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 ATP2A2P16615 1042 aaKnown RBP14.44□□□□□ -0.1
COL2A1-201ENST00000337299 PHKA1P46020 1223 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 PDE6CP51160 858 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 SEPT6Q14141 434 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 NONOQ15233 471 aaKnown RBP eCLIP14.44□□□□□ -0.1
COL2A1-201ENST00000337299 GLE1Q53GS7 698 aaKnown RBP14.44□□□□□ -0.1
COL2A1-201ENST00000337299 SWT1Q5T5J6 900 aaKnown RBP14.44□□□□□ -0.1
COL2A1-201ENST00000337299 HS2ST1Q7LGA3 356 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 FBXO2Q9UK22 296 aaPredicted RBP14.44□□□□□ -0.1
COL2A1-201ENST00000337299 NPHP4O75161 1426 aaPredicted RBP14.44□□□□□ -0.1
COL2A1-201ENST00000337299 RASSF10A6NK89 507 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 SCG2P13521 617 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 STAT1P42224 750 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 MAN2A1Q16706 1144 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 MB21D2Q8IYB1 491 aaPredicted RBP14.44□□□□□ -0.1
COL2A1-201ENST00000337299 KAT2BQ92831 832 aa14.44□□□□□ -0.1
COL2A1-201ENST00000337299 ZNF609O15014 1411 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 UNC13BO14795 1591 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 EPB41P11171 864 aaKnown RBP14.43□□□□□ -0.1
COL2A1-201ENST00000337299 SNX1Q13596 522 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 PSMD6Q15008 389 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 RFX8Q6ZV50 586 aa14.43□□□□□ -0.1
COL2A1-201ENST00000337299 SPATA5Q8NB90 893 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms