RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 CTCFLQ8NI51 663 aaPredicted RBP16.08■□□□□ 0.16
TMEM41B-201ENST00000299596 HERVK_113Q902F9 699 aa16.08■□□□□ 0.16
TMEM41B-201ENST00000299596 EMID1Q96A84 441 aaPredicted RBP16.08■□□□□ 0.16
TMEM41B-201ENST00000299596 TMEM87BQ96K49 555 aa16.08■□□□□ 0.16
TMEM41B-201ENST00000299596 PDCD2LQ9BRP1 358 aa16.08■□□□□ 0.16
TMEM41B-201ENST00000299596 TTYH1Q9H313 450 aaPredicted RBP16.08■□□□□ 0.16
TMEM41B-201ENST00000299596 LY9Q9HBG7 655 aa16.08■□□□□ 0.16
TMEM41B-201ENST00000299596 MRVI1Q9Y6F6 885 aa16.08■□□□□ 0.16
TMEM41B-201ENST00000299596 SLC27A2O14975 620 aa16.07■□□□□ 0.16
TMEM41B-201ENST00000299596 PRC1O43663 620 aa16.07■□□□□ 0.16
TMEM41B-201ENST00000299596 MMP3P08254 477 aa16.07■□□□□ 0.16
TMEM41B-201ENST00000299596 CYP2C9P11712 490 aa16.07■□□□□ 0.16
TMEM41B-201ENST00000299596 MYCLP12524 364 aaPredicted RBP16.07■□□□□ 0.16
TMEM41B-201ENST00000299596 DNAJB2P25686 324 aa16.07■□□□□ 0.16
TMEM41B-201ENST00000299596 HOXA13P31271 388 aaPredicted RBP16.07■□□□□ 0.16
TMEM41B-201ENST00000299596 LAMC2Q13753 1193 aa16.07■□□□□ 0.16
TMEM41B-201ENST00000299596 NECTIN1Q15223 517 aa16.07■□□□□ 0.16
TMEM41B-201ENST00000299596 DGKDQ16760 1214 aa16.07■□□□□ 0.16
TMEM41B-201ENST00000299596 ZNF654Q8IZM8 581 aa16.07■□□□□ 0.16
TMEM41B-201ENST00000299596 LZTS2Q9BRK4 669 aa16.07■□□□□ 0.16
TMEM41B-201ENST00000299596 WNT8AQ9H1J5 351 aa16.07■□□□□ 0.16
TMEM41B-201ENST00000299596 TGFB3P10600 412 aa16.06■□□□□ 0.16
TMEM41B-201ENST00000299596 GNAQP50148 359 aa16.06■□□□□ 0.16
TMEM41B-201ENST00000299596 PGM5Q15124 567 aa16.06■□□□□ 0.16
TMEM41B-201ENST00000299596 NFXL1Q6ZNB6 911 aa16.06■□□□□ 0.16
TMEM41B-201ENST00000299596 SPZ1Q9BXG8 430 aa16.06■□□□□ 0.16
TMEM41B-201ENST00000299596 ANO2Q9NQ90 1003 aa16.06■□□□□ 0.16
TMEM41B-201ENST00000299596 CDH23Q9H251 3354 aa16.05■□□□□ 0.16
TMEM41B-201ENST00000299596 CCDC69A6NI79 296 aa16.05■□□□□ 0.16
TMEM41B-201ENST00000299596 PFKMP08237 780 aa16.05■□□□□ 0.16
TMEM41B-201ENST00000299596 CCND2P30279 289 aa16.05■□□□□ 0.16
TMEM41B-201ENST00000299596 LIFRP42702 1097 aa16.05■□□□□ 0.16
TMEM41B-201ENST00000299596 CREB3L3Q68CJ9 461 aa16.05■□□□□ 0.16
TMEM41B-201ENST00000299596 DHX37Q8IY37 1157 aaKnown RBP16.05■□□□□ 0.16
TMEM41B-201ENST00000299596 RETREG2Q8NC44 543 aa16.05■□□□□ 0.16
TMEM41B-201ENST00000299596 TIFAQ96CG3 184 aa16.05■□□□□ 0.16
TMEM41B-201ENST00000299596 RRP36Q96EU6 259 aaKnown RBP16.05■□□□□ 0.16
TMEM41B-201ENST00000299596 SCLYQ96I15 445 aa16.05■□□□□ 0.16
TMEM41B-201ENST00000299596 NOD1Q9Y239 953 aa16.05■□□□□ 0.16
TMEM41B-201ENST00000299596 PITPNM1O00562 1244 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 SH2B2O14492 632 aaPredicted RBP16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 RGS20O76081 388 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 CALM1P0DP23 149 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 CALM2P0DP24 149 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 CALM3P0DP25 149 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 RFC2P35250 354 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 CHMP4BP1P59074 171 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 BFSP2Q13515 415 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 RNF20Q5VTR2 975 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 OTOP2Q7RTS6 562 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 SESTD1Q86VW0 696 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 FCHSD1Q86WN1 690 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 PPTC7Q8NI37 304 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 MYL10Q9BUA6 226 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 KATNAL1Q9BW62 490 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 PBX4Q9BYU1 374 aa16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 CXXC1Q9P0U4 656 aaPredicted RBP16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 SEC63Q9UGP8 760 aaKnown RBP16.04■□□□□ 0.16
TMEM41B-201ENST00000299596 GRXCR1A8MXD5 290 aa16.03■□□□□ 0.16
TMEM41B-201ENST00000299596 PPFIA4O75335 1185 aa16.03■□□□□ 0.16
TMEM41B-201ENST00000299596 STAM2O75886 525 aa16.03■□□□□ 0.16
TMEM41B-201ENST00000299596 RAB30Q15771 203 aa16.03■□□□□ 0.16
TMEM41B-201ENST00000299596 PTGISQ16647 500 aa16.03■□□□□ 0.16
TMEM41B-201ENST00000299596 MYSM1Q5VVJ2 828 aa16.03■□□□□ 0.16
TMEM41B-201ENST00000299596 PIBF1Q8WXW3 757 aa16.03■□□□□ 0.16
TMEM41B-201ENST00000299596 MYLIPQ8WY64 445 aa16.03■□□□□ 0.16
TMEM41B-201ENST00000299596 KAT2BQ92831 832 aa16.03■□□□□ 0.16
TMEM41B-201ENST00000299596 ZNF576Q9H609 170 aa16.03■□□□□ 0.16
TMEM41B-201ENST00000299596 MSRAQ9UJ68 235 aa16.03■□□□□ 0.16
TMEM41B-201ENST00000299596 GNPTABQ3T906 1256 aa16.02■□□□□ 0.16
TMEM41B-201ENST00000299596 CELF3Q5SZQ8 465 aaKnown RBP16.02■□□□□ 0.16
TMEM41B-201ENST00000299596 CCDC155Q8N6L0 562 aa16.02■□□□□ 0.16
TMEM41B-201ENST00000299596 IL31RAQ8NI17 732 aa16.02■□□□□ 0.16
TMEM41B-201ENST00000299596 PPP1R13LQ8WUF5 828 aa16.02■□□□□ 0.16
TMEM41B-201ENST00000299596 CUL5Q93034 780 aa16.02■□□□□ 0.16
TMEM41B-201ENST00000299596 SLC12A7Q9Y666 1083 aa16.02■□□□□ 0.16
TMEM41B-201ENST00000299596 SLC4A7Q9Y6M7 1214 aa16.02■□□□□ 0.16
TMEM41B-201ENST00000299596 MYH6P13533 1939 aa16.02■□□□□ 0.16
TMEM41B-201ENST00000299596 SCN10AQ9Y5Y9 1956 aa16.02■□□□□ 0.16
TMEM41B-201ENST00000299596 GGPS1O95749 300 aa16.02■□□□□ 0.15
TMEM41B-201ENST00000299596 IQCF3P0C7M6 154 aa16.02■□□□□ 0.15
TMEM41B-201ENST00000299596 ACTN1P12814 892 aa16.02■□□□□ 0.15
TMEM41B-201ENST00000299596 HOXD8P13378 290 aaPredicted RBP16.02■□□□□ 0.15
TMEM41B-201ENST00000299596 FOSL2P15408 326 aa16.02■□□□□ 0.15
TMEM41B-201ENST00000299596 PBX2P40425 430 aa16.02■□□□□ 0.15
TMEM41B-201ENST00000299596 GRIN2CQ14957 1233 aa16.02■□□□□ 0.15
TMEM41B-201ENST00000299596 SRBD1Q8N5C6 995 aaKnown RBP16.02■□□□□ 0.15
TMEM41B-201ENST00000299596 C7orf31Q8N865 590 aa16.02■□□□□ 0.15
TMEM41B-201ENST00000299596 MAFAQ8NHW3 353 aaPredicted RBP16.02■□□□□ 0.15
TMEM41B-201ENST00000299596 CAGE1Q8TC20 777 aa16.02■□□□□ 0.15
TMEM41B-201ENST00000299596 VWCEQ96DN2 955 aa16.02■□□□□ 0.15
TMEM41B-201ENST00000299596 SPATA33Q96N06 139 aa16.02■□□□□ 0.15
TMEM41B-201ENST00000299596 UNC80Q8N2C7 3258 aa16.01■□□□□ 0.15
TMEM41B-201ENST00000299596 PIK3CDO00329 1044 aa16.01■□□□□ 0.15
TMEM41B-201ENST00000299596 PLEKHA8P1O95397 391 aa16.01■□□□□ 0.15
TMEM41B-201ENST00000299596 F2P00734 622 aa16.01■□□□□ 0.15
TMEM41B-201ENST00000299596 PSEN2P49810 448 aa16.01■□□□□ 0.15
TMEM41B-201ENST00000299596 SP2Q02086 613 aa16.01■□□□□ 0.15
TMEM41B-201ENST00000299596 MFSD10Q14728 455 aa16.01■□□□□ 0.15
TMEM41B-201ENST00000299596 HSDL1Q3SXM5 330 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms