RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 ZNF76P36508 570 aa11.59□□□□□ -0.55
HMGCL-201ENST00000235958 PKN2Q16513 984 aaKnown RBP11.59□□□□□ -0.55
HMGCL-201ENST00000235958 MFSD14CQ5VZR4 134 aa11.59□□□□□ -0.55
HMGCL-201ENST00000235958 XRRA1Q6P2D8 792 aa11.59□□□□□ -0.55
HMGCL-201ENST00000235958 EEPD1Q7L9B9 569 aa11.59□□□□□ -0.55
HMGCL-201ENST00000235958 CYP2W1Q8TAV3 490 aa11.59□□□□□ -0.55
HMGCL-201ENST00000235958 TRIB2Q92519 343 aa11.59□□□□□ -0.55
HMGCL-201ENST00000235958 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.59□□□□□ -0.55
HMGCL-201ENST00000235958 ZDHHC9Q9Y397 364 aa11.59□□□□□ -0.55
HMGCL-201ENST00000235958 RBBP6Q7Z6E9 1792 aaKnown RBP11.59□□□□□ -0.55
HMGCL-201ENST00000235958 FRMPD4Q14CM0 1322 aa11.59□□□□□ -0.55
HMGCL-201ENST00000235958 SYNGAP1Q96PV0 1343 aa11.59□□□□□ -0.55
HMGCL-201ENST00000235958 ZNF236Q9UL36 1845 aa11.58□□□□□ -0.56
HMGCL-201ENST00000235958 ZSCAN22P10073 491 aaPredicted RBP11.58□□□□□ -0.56
HMGCL-201ENST00000235958 GRK4P32298 578 aa11.58□□□□□ -0.56
HMGCL-201ENST00000235958 TOB1P50616 345 aaPredicted RBP11.58□□□□□ -0.56
HMGCL-201ENST00000235958 TRIM32Q13049 653 aa11.58□□□□□ -0.56
HMGCL-201ENST00000235958 ACVR2BQ13705 512 aa11.58□□□□□ -0.56
HMGCL-201ENST00000235958 LETM2Q2VYF4 491 aa11.58□□□□□ -0.56
HMGCL-201ENST00000235958 SEPT14Q6ZU15 432 aa11.58□□□□□ -0.56
HMGCL-201ENST00000235958 SLAIN1Q8ND83 568 aa11.58□□□□□ -0.56
HMGCL-201ENST00000235958 MXRA8Q9BRK3 442 aa11.58□□□□□ -0.56
HMGCL-201ENST00000235958 ABHD16BQ9H3Z7 469 aa11.58□□□□□ -0.56
HMGCL-201ENST00000235958 PDGFCQ9NRA1 345 aa11.58□□□□□ -0.56
HMGCL-201ENST00000235958 UBIAD1Q9Y5Z9 338 aa11.58□□□□□ -0.56
HMGCL-201ENST00000235958 KIAA1217Q5T5P2 1943 aa11.58□□□□□ -0.56
HMGCL-201ENST00000235958 CYP3A7-CYP3A51PA0A087WV96 503 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 FAM86B1E9PN63 330 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 MEIS1O00470 390 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 STAM2O75886 525 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 RGS20O76081 388 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 BRD1O95696 1058 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 HMGCRP04035 888 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 FAM86B2P0C5J1 330 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 ITGB5P18084 799 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 CYP3A7P24462 503 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 CIITAP33076 1130 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 CACNB2Q08289 660 aaPredicted RBP11.57□□□□□ -0.56
HMGCL-201ENST00000235958 RESTQ13127 1097 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 CEP55Q53EZ4 464 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 TAPT1Q6NXT6 567 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 FBXO46Q6PJ61 603 aaPredicted RBP11.57□□□□□ -0.56
HMGCL-201ENST00000235958 BRAPQ7Z569 592 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 NEK8Q86SG6 692 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 TRPV1Q8NER1 839 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 SH3TC2Q8TF17 1288 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 WDR11Q9BZH6 1224 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 KATNBL1Q9H079 304 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 ZSCAN16Q9H4T2 348 aaPredicted RBP11.57□□□□□ -0.56
HMGCL-201ENST00000235958 JADE2Q9NQC1 790 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 CNPY2Q9Y2B0 182 aa11.57□□□□□ -0.56
HMGCL-201ENST00000235958 SPATA31C2B4DYI2 1134 aa11.56□□□□□ -0.56
HMGCL-201ENST00000235958 WNT7AO00755 349 aa11.56□□□□□ -0.56
HMGCL-201ENST00000235958 MAFGO15525 162 aa11.56□□□□□ -0.56
HMGCL-201ENST00000235958 CCNT1O60563 726 aaKnown RBP11.56□□□□□ -0.56
HMGCL-201ENST00000235958 F13A1P00488 732 aa11.56□□□□□ -0.56
HMGCL-201ENST00000235958 ZNF865P0CJ78 1059 aaPredicted RBP11.56□□□□□ -0.56
HMGCL-201ENST00000235958 ARP10275 920 aa11.56□□□□□ -0.56
HMGCL-201ENST00000235958 PRKAR2AP13861 404 aaKnown RBP11.56□□□□□ -0.56
HMGCL-201ENST00000235958 NUCB2P80303 420 aa11.56□□□□□ -0.56
HMGCL-201ENST00000235958 ZNF174Q15697 407 aa11.56□□□□□ -0.56
HMGCL-201ENST00000235958 CCDC144BQ3MJ40 725 aa11.56□□□□□ -0.56
HMGCL-201ENST00000235958 SLC9C1Q4G0N8 1177 aa11.56□□□□□ -0.56
HMGCL-201ENST00000235958 MAP3K21Q5TCX8 1036 aa11.56□□□□□ -0.56
HMGCL-201ENST00000235958 IQSEC1Q6DN90 963 aa11.56□□□□□ -0.56
HMGCL-201ENST00000235958 PPP4R3AQ6IN85 833 aa11.56□□□□□ -0.56
HMGCL-201ENST00000235958 FAM173BQ6P4H8 233 aa11.56□□□□□ -0.56
HMGCL-201ENST00000235958 FBXO16Q8IX29 292 aaPredicted RBP11.56□□□□□ -0.56
HMGCL-201ENST00000235958 INPP4AQ96PE3 977 aaPredicted RBP11.56□□□□□ -0.56
HMGCL-201ENST00000235958 VTA1Q9NP79 307 aa11.56□□□□□ -0.56
HMGCL-201ENST00000235958 NRBP1Q9UHY1 535 aa11.56□□□□□ -0.56
HMGCL-201ENST00000235958 IGLV3-22A0A075B6J6 115 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 RBM47A0AV96 593 aaKnown RBP11.55□□□□□ -0.56
HMGCL-201ENST00000235958 TDP2O95551 362 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 INHAP05111 366 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 TGFB3P10600 412 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 CNGA1P29973 690 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 ICAM3P32942 547 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 TRAPPC10P48553 1259 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 PRR16Q569H4 304 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 RILPL1Q5EBL4 403 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 TMEM63BQ5T3F8 832 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 MYSM1Q5VVJ2 828 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 CCDC62Q6P9F0 684 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 MOXD1Q6UVY6 613 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 NIPA1Q7RTP0 329 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 NLRX1Q86UT6 975 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 PLA2G4DQ86XP0 818 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 SCFD2Q8WU76 684 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 GPRASP2Q96D09 838 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 MBOAT7Q96N66 472 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 UIMC1Q96RL1 719 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 KCNH7Q9NS40 1196 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 TFIP11Q9UBB9 837 aaKnown RBP11.55□□□□□ -0.56
HMGCL-201ENST00000235958 DDX41Q9UJV9 622 aaKnown RBP11.55□□□□□ -0.56
HMGCL-201ENST00000235958 ZHX1Q9UKY1 873 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-201ENST00000235958 CIZ1Q9ULV3 898 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-201ENST00000235958 NOL7Q9UMY1 257 aaKnown RBP11.55□□□□□ -0.56
HMGCL-201ENST00000235958 PCDHB6Q9Y5E3 794 aa11.55□□□□□ -0.56
HMGCL-201ENST00000235958 ATP9AO75110 1047 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms