RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 TDRD12Q587J7 1177 aaKnown RBP22.46■■□□□ 1.19
RCN1-201ENST00000054950 ALS2CR12Q96Q35 445 aa22.46■■□□□ 1.19
RCN1-201ENST00000054950 SAMM50Q9Y512 469 aa22.46■■□□□ 1.19
RCN1-201ENST00000054950 TDP2O95551 362 aa22.45■■□□□ 1.19
RCN1-201ENST00000054950 RNASE9P60153 205 aaKnown RBP22.45■■□□□ 1.19
RCN1-201ENST00000054950 AMPD3Q01432 767 aa22.45■■□□□ 1.19
RCN1-201ENST00000054950 KLHDC7AQ5VTJ3 777 aa22.45■■□□□ 1.19
RCN1-201ENST00000054950 BCAS4Q8TDM0 211 aa22.45■■□□□ 1.19
RCN1-201ENST00000054950 PACSIN2Q9UNF0 486 aaPredicted RBP22.45■■□□□ 1.19
RCN1-201ENST00000054950 FAM153BP0C7A2 387 aa22.45■■□□□ 1.18
RCN1-201ENST00000054950 ENOX2Q16206 610 aaKnown RBP22.45■■□□□ 1.18
RCN1-201ENST00000054950 FAM153CQ494X1 144 aa22.45■■□□□ 1.18
RCN1-201ENST00000054950 C8orf74Q6P047 294 aa22.45■■□□□ 1.18
RCN1-201ENST00000054950 ZNF572Q7Z3I7 529 aaPredicted RBP22.45■■□□□ 1.18
RCN1-201ENST00000054950 CERS3Q8IU89 383 aa22.45■■□□□ 1.18
RCN1-201ENST00000054950 FAM153AQ9UHL3 310 aa22.45■■□□□ 1.18
RCN1-201ENST00000054950 KRT14P02533 472 aa22.45■■□□□ 1.18
RCN1-201ENST00000054950 LDHBP07195 334 aaKnown RBP22.45■■□□□ 1.18
RCN1-201ENST00000054950 PPFIA1Q13136 1202 aa22.45■■□□□ 1.18
RCN1-201ENST00000054950 CACNA2D4Q7Z3S7 1137 aa22.45■■□□□ 1.18
RCN1-201ENST00000054950 C6orf50Q9HD87 102 aa22.45■■□□□ 1.18
RCN1-201ENST00000054950 LCA5LO95447 670 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 GLI1P08151 1106 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 TCP1P17987 556 aaKnown RBP22.44■■□□□ 1.18
RCN1-201ENST00000054950 ATP1A2P50993 1020 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 KCNMA1Q12791 1236 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 LRRC55Q6ZSA7 311 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 MICALL1Q8N3F8 863 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 LARP4BQ92615 738 aaKnown RBP22.44■■□□□ 1.18
RCN1-201ENST00000054950 ZIM3Q96PE6 472 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 SH3GL2Q99962 352 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 FRMPD2Q68DX3 1309 aaPredicted RBP22.44■■□□□ 1.18
RCN1-201ENST00000054950 FTCDO95954 541 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 CARSP49589 748 aaKnown RBP22.44■■□□□ 1.18
RCN1-201ENST00000054950 LIG3P49916 1009 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 PPARDQ03181 441 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 PDCLQ13371 301 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 HGSNATQ68CP4 663 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 PDXDC1Q6P996 788 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 CLEC4GQ6UXB4 293 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 UNC13DQ70J99 1090 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 COA7Q96BR5 231 aa22.44■■□□□ 1.18
RCN1-201ENST00000054950 EPHB4P54760 987 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 TRADDQ15628 312 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 ASTE1Q2TB18 679 aaPredicted RBP22.43■■□□□ 1.18
RCN1-201ENST00000054950 SOGA3Q5TF21 947 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 PPM1EQ8WY54 764 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 FGFBP2Q9BYJ0 223 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 TBC1D7Q9P0N9 293 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 NFU1Q9UMS0 254 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 COL14A1Q05707 1796 aaKnown RBP22.43■■□□□ 1.18
RCN1-201ENST00000054950 MAST2Q6P0Q8 1798 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 EDIL3O43854 480 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 ARID5AQ03989 594 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 CALCRLQ16602 461 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 ECM1Q16610 540 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 IFT81Q8WYA0 676 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 CDK5RAP3Q96JB5 506 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 NLRP3Q96P20 1036 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 EYA3Q99504 573 aa22.43■■□□□ 1.18
RCN1-201ENST00000054950 EIF3HO15372 352 aaKnown RBP eCLIP22.42■■□□□ 1.18
RCN1-201ENST00000054950 PRLRP16471 622 aa22.42■■□□□ 1.18
RCN1-201ENST00000054950 PAFAH1B1P43034 410 aa22.42■■□□□ 1.18
RCN1-201ENST00000054950 SEMA3FQ13275 785 aa22.42■■□□□ 1.18
RCN1-201ENST00000054950 TADA2BQ86TJ2 420 aa22.42■■□□□ 1.18
RCN1-201ENST00000054950 REXO1Q8N1G1 1221 aaKnown RBP22.42■■□□□ 1.18
RCN1-201ENST00000054950 DDX12PQ92771 950 aa22.42■■□□□ 1.18
RCN1-201ENST00000054950 SPZ1Q9BXG8 430 aa22.42■■□□□ 1.18
RCN1-201ENST00000054950 SNED1Q8TER0 1413 aa22.42■■□□□ 1.18
RCN1-201ENST00000054950 TLR2O60603 784 aa22.42■■□□□ 1.18
RCN1-201ENST00000054950 RUFY1Q96T51 708 aa22.42■■□□□ 1.18
RCN1-201ENST00000054950 EFCC1Q9HA90 598 aa22.42■■□□□ 1.18
RCN1-201ENST00000054950 FAM169AQ9Y6X4 670 aa22.42■■□□□ 1.18
RCN1-201ENST00000054950 ROBO3Q96MS0 1386 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 USP17L5A8MUK1 530 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 GOLGA8KD6RF30 607 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 GNA11P29992 359 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 GUCY2FP51841 1108 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 ITIH3Q06033 890 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 EFCAB13Q8IY85 973 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 SNX29Q8TEQ0 813 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 MTMR9Q96QG7 549 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 SEC63Q9UGP8 760 aaKnown RBP22.41■■□□□ 1.18
RCN1-201ENST00000054950 WNK3Q9BYP7 1800 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 ROBO1Q9Y6N7 1651 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 HSF2BPO75031 334 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 PALMO75781 387 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 PTPROQ16827 1216 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 NBPF5PQ86XG9 351 aaPredicted RBP22.41■■□□□ 1.18
RCN1-201ENST00000054950 CEP95Q96GE4 821 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 CCDC43Q96MW1 224 aaKnown RBP22.41■■□□□ 1.18
RCN1-201ENST00000054950 NOX5Q96PH1 765 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 EPB41L5Q9HCM4 733 aa22.41■■□□□ 1.18
RCN1-201ENST00000054950 PPP1R2P41236 205 aa22.4■■□□□ 1.18
RCN1-201ENST00000054950 CDK8P49336 464 aa22.4■■□□□ 1.18
RCN1-201ENST00000054950 GUCY2DQ02846 1103 aa22.4■■□□□ 1.18
RCN1-201ENST00000054950 DNAAF5Q86Y56 855 aa22.4■■□□□ 1.18
RCN1-201ENST00000054950 GUF1Q8N442 669 aaKnown RBP22.4■■□□□ 1.18
RCN1-201ENST00000054950 PACSIN1Q9BY11 444 aa22.4■■□□□ 1.18
RCN1-201ENST00000054950 ANKRD2Q9GZV1 360 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms