RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Pdzrn4E9PUZ9 1014 aa12.58□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ugt1a10E9PXN7 530 aa12.58□□□□□ -0.4
Ddx55-201ENSMUST00000071057 WaplQ65Z40 1200 aaKnown RBP12.58□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Retreg2Q6NS82 541 aa12.58□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ano2Q8CFW1 1002 aa12.58□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Sertad1Q9JL10 236 aa12.58□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Arl6ip4Q9JM93 229 aa12.58□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Itga2bQ9QUM0 1033 aa12.58□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Rgs17Q9QZB0 210 aa12.58□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Herc3A6H6S0 1050 aa12.58□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ccdc85cE9Q6B2 420 aa12.58□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Akap4Q60662 849 aa12.58□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Galnt17Q7TT15 598 aa12.58□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Brd3Q8K2F0 726 aaKnown RBP12.58□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Rnf112Q96DY5 654 aa12.58□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ulk4Q3V129 1303 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 VirmaA2AIV2 1811 aaKnown RBP12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Nf2P46662 596 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Lig3P97386 1015 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Fbln1Q08879 705 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Qrich1Q3UA37 777 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Tbc1d9bQ5SVR0 1263 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Kcnj11Q61743 390 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Rbm12b2Q66JV4 834 aaKnown RBP12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ccdc172Q810N9 267 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Pdzph1Q8BGR1 1238 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 IarsQ8BU30 1262 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Kiaa1024Q8K3V7 917 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Tjap1Q9DCD5 539 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Prl2c5Q9JLV9 222 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ccnt1Q9QWV9 724 aaKnown RBP12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Plxnb2B2RXS4 1842 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ddx23D3Z0M9 819 aaKnown RBP12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Zfp788E9Q980 884 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Brip1Q5SXJ3 1174 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Asic1Q6NXK8 526 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Adcy2Q80TL1 1090 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ftsj3Q9DBE9 838 aaKnown RBP12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Git2Q9JLQ2 708 aa12.57□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Trove2O08848 538 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Mybl2P48972 704 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Trim43cP86449 446 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ncf1Q09014 390 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Abl2Q4JIM5 1182 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Krt87Q6IMF0 495 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Rbbp5Q8BX09 538 aaKnown RBP12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Znf428Q8C1M2 176 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Tango6Q8C3S2 1079 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Q9CR55 154 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Mss51Q9D5Z5 446 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Sorbs3Q9R1Z8 733 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Vstm4T1NXB5 319 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Kcnd1Q03719 651 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Olfr121Q5CZY0 321 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ppp1r1bQ60829 194 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Lamc2Q61092 1191 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 CtifQ6PEE2 600 aaKnown RBP12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Smarca1Q6PGB8 1046 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ppp2r2cQ8BG02 447 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Trim9Q8C7M3 817 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Lmbrd1Q8K0B2 537 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Nek9Q8K1R7 984 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Cd248Q91V98 765 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Cul5Q9D5V5 780 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Krt34Q9D646 392 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Eid1Q9DCR4 169 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ercc4Q9QZD4 917 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 AmfrQ9R049 643 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Plcb1Q9Z1B3 1216 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ccdc88cQ6VGS5 2009 aa12.56□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Col1a1P11087 1453 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Akap17bA2A3V1 959 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Rsbn1lD3Z0K6 821 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Vmn2r71L7N2D8 855 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Stk10O55098 966 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 GpiP06745 558 aaKnown RBP12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Zfp42P22227 288 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Psg29Q3URN6 468 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Jade2Q6ZQF7 829 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Cyp4f39Q8BGU0 532 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Dnajc19Q9CQV7 116 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Aldh1b1Q9CZS1 519 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Klhl10Q9D5V2 608 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Pkd2l2Q9JLG4 621 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Mcm5P49718 733 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Foxn3Q499D0 457 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Satb1Q60611 764 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Armc6Q8BNU0 468 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 CenpqQ9CPQ5 267 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Coro1cQ9WUM4 474 aa12.55□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Parp1P11103 1013 aaKnown RBP12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Abcd1P48410 736 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Nat2P50295 290 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Btg3P50615 252 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 MymkQ9D1N4 221 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Copb1Q9JIF7 953 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Pbx1P41778 430 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Cyp2e1Q05421 493 aa12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Ssrp1Q08943 708 aaKnown RBP12.54□□□□□ -0.4
Ddx55-201ENSMUST00000071057 Igbp1Q61249 340 aa12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms