RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 TRX2P22803 104 aaKnown RBP2.4□□□□□ -2.03
snR54snR54 FRE2P36033 711 aa2.4□□□□□ -2.03
snR54snR54 TIS11P47977 285 aa2.4□□□□□ -2.03
snR54snR54 HEF3P53978 1044 aaKnown RBP2.4□□□□□ -2.03
snR54snR54 MRPL35Q06678 367 aa2.4□□□□□ -2.03
snR54snR54 KEL3Q08979 651 aaPredicted RBP2.4□□□□□ -2.03
snR54snR54 RLM1Q12224 676 aa2.4□□□□□ -2.03
snR54snR54 NOP58Q12499 511 aaKnown RBP2.4□□□□□ -2.03
snR54snR54 YPT6Q99260 215 aa2.4□□□□□ -2.03
snR54snR54 FAB1P34756 2278 aa2.39□□□□□ -2.03
snR54snR54 COR1P07256 457 aa2.39□□□□□ -2.03
snR54snR54 MSR1P38714 643 aa2.39□□□□□ -2.03
snR54snR54 KEL1P38853 1164 aaKnown RBP2.39□□□□□ -2.03
snR54snR54 YGR210CP42942 411 aa2.39□□□□□ -2.03
snR54snR54 YFL067WP43537 175 aa2.39□□□□□ -2.03
snR54snR54 RRT5P43607 289 aa2.39□□□□□ -2.03
snR54snR54 ART5P53244 586 aaKnown RBP2.39□□□□□ -2.03
snR54snR54 CAF40P53829 373 aa2.39□□□□□ -2.03
snR54snR54 PAL1Q05518 499 aaKnown RBP2.39□□□□□ -2.03
snR54snR54 MHR1Q06630 226 aa2.39□□□□□ -2.03
snR54snR54 YEH1Q07804 573 aa2.39□□□□□ -2.03
snR54snR54 THP3Q12049 470 aaKnown RBP2.39□□□□□ -2.03
snR54snR54 HUA2Q12134 243 aa2.39□□□□□ -2.03
snR54snR54 ISY1P21374 235 aaPredicted RBP2.38□□□□□ -2.03
snR54snR54 BUB3P26449 341 aa2.38□□□□□ -2.03
snR54snR54 MCM10P32354 571 aa2.38□□□□□ -2.03
snR54snR54 ATP11P32453 318 aa2.38□□□□□ -2.03
snR54snR54 PAD1P33751 242 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
snR54snR54 TCD2P36101 447 aaKnown RBP2.38□□□□□ -2.03
snR54snR54 VID30P53076 958 aa2.38□□□□□ -2.03
snR54snR54 SDT1P53078 280 aa2.38□□□□□ -2.03
snR54snR54 BTN2P53286 410 aa2.38□□□□□ -2.03
snR54snR54 HRT3Q12347 344 aa2.38□□□□□ -2.03
snR54snR54 HHF1P02309 103 aaKnown RBP2.37□□□□□ -2.03
snR54snR54 PRP2P20095 876 aaPredicted RBP2.37□□□□□ -2.03
snR54snR54 CPR4P25334 318 aa2.37□□□□□ -2.03
snR54snR54 PAP1P29468 568 aaKnown RBP2.37□□□□□ -2.03
snR54snR54 NDI1P32340 513 aa2.37□□□□□ -2.03
snR54snR54 HXT1P32465 570 aa2.37□□□□□ -2.03
snR54snR54 NAT2P37293 288 aa2.37□□□□□ -2.03
snR54snR54 SYG1P40528 902 aa2.37□□□□□ -2.03
snR54snR54 IOC4Q04213 475 aa2.37□□□□□ -2.03
snR54snR54 ESA1Q08649 445 aa2.37□□□□□ -2.03
snR54snR54 RRG7Q08774 242 aaPredicted RBP2.37□□□□□ -2.03
snR54snR54 RAV1P47104 1357 aa2.36□□□□□ -2.03
snR54snR54 ADH2P00331 348 aaKnown RBP2.36□□□□□ -2.03
snR54snR54 SOD1P00445 154 aaKnown RBP2.36□□□□□ -2.03
snR54snR54 GLC7P32598 312 aaKnown RBP2.36□□□□□ -2.03
snR54snR54 MBB1P39534 108 aa2.36□□□□□ -2.03
snR54snR54 FLC2P39719 783 aa2.36□□□□□ -2.03
snR54snR54 GOR1P53839 350 aa2.36□□□□□ -2.03
snR54snR54 OPY2Q06810 360 aa2.36□□□□□ -2.03
snR54snR54 TSR1Q07381 788 aaKnown RBP2.36□□□□□ -2.03
snR54snR54 NMD4Q12129 218 aa2.36□□□□□ -2.03
snR54snR54 GAL80P04387 435 aa2.35□□□□□ -2.03
snR54snR54 SSH4P32343 579 aa2.35□□□□□ -2.03
snR54snR54 PAH1P32567 862 aa2.35□□□□□ -2.03
snR54snR54 SPR1P32603 445 aa2.35□□□□□ -2.03
snR54snR54 MFT1P33441 392 aaKnown RBP2.35□□□□□ -2.03
snR54snR54 RSM22P36056 628 aa2.35□□□□□ -2.03
snR54snR54 POP1P41812 875 aa2.35□□□□□ -2.03
snR54snR54 POP6P53218 158 aa2.35□□□□□ -2.03
snR54snR54 CAF130P53280 1122 aaPredicted RBP2.35□□□□□ -2.03
snR54snR54 TOF1P53840 1238 aa2.35□□□□□ -2.03
snR54snR54 RRN11Q04712 507 aa2.35□□□□□ -2.03
snR54snR54 MFB1Q04922 465 aa2.35□□□□□ -2.03
snR54snR54 RBD2Q12270 262 aa2.35□□□□□ -2.03
snR54snR54 HSC82P15108 705 aaKnown RBP2.34□□□□□ -2.03
snR54snR54 ARO2P28777 376 aaKnown RBP2.34□□□□□ -2.03
snR54snR54 WBP1P33767 430 aaKnown RBP2.34□□□□□ -2.03
snR54snR54 REG2P38232 338 aa2.34□□□□□ -2.03
snR54snR54 MUM2P38236 366 aa2.34□□□□□ -2.03
snR54snR54 ERP2P39704 215 aa2.34□□□□□ -2.03
snR54snR54 ISC1P40015 477 aaKnown RBP2.34□□□□□ -2.03
snR54snR54 REE1P40893 198 aa2.34□□□□□ -2.03
snR54snR54 MRX6P48564 524 aa2.34□□□□□ -2.03
snR54snR54 RTS3P53289 263 aa2.34□□□□□ -2.03
snR54snR54 YLR152CP54072 576 aa2.34□□□□□ -2.03
snR54snR54 VPS38Q05919 439 aa2.34□□□□□ -2.03
snR54snR54 SEC53P07283 254 aaKnown RBP2.33□□□□□ -2.04
snR54snR54 SAM1P10659 382 aaKnown RBP2.33□□□□□ -2.04
snR54snR54 AAC3P18238 307 aa2.33□□□□□ -2.04
snR54snR54 SAM2P19358 384 aaKnown RBP2.33□□□□□ -2.04
snR54snR54 PRD1P25375 712 aa2.33□□□□□ -2.04
snR54snR54 CDC60P26637 1090 aaKnown RBP2.33□□□□□ -2.04
snR54snR54 PIM1P36775 1133 aa2.33□□□□□ -2.04
snR54snR54 SRO77P38163 1010 aa2.33□□□□□ -2.04
snR54snR54 YMR147WP40218 223 aaKnown RBP2.33□□□□□ -2.04
snR54snR54 WWM1P43582 211 aaKnown RBP2.33□□□□□ -2.04
snR54snR54 TRS85P46944 698 aa2.33□□□□□ -2.04
snR54snR54 SLG1P54867 378 aa2.33□□□□□ -2.04
snR54snR54 YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
snR54snR54 CTI6Q08923 506 aa2.33□□□□□ -2.04
snR54snR54 YJR112W-AQ3E743 109 aa2.33□□□□□ -2.04
snR54snR54 CBS1P14066 229 aa2.32□□□□□ -2.04
snR54snR54 YCR100CP25606 316 aa2.32□□□□□ -2.04
snR54snR54 DOT5P40553 215 aa2.32□□□□□ -2.04
snR54snR54 OST1P41543 476 aaKnown RBP2.32□□□□□ -2.04
snR54snR54 UPF3P48412 387 aaKnown RBP2.32□□□□□ -2.04
snR54snR54 YGL039WP53183 348 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms