RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C RIB3Q99258 208 aa5.87□□□□□ -1.47
VPS4YPR173C ARG3P05150 338 aa5.86□□□□□ -1.47
VPS4YPR173C MIS1P09440 975 aaKnown RBP5.86□□□□□ -1.47
VPS4YPR173C GLN4P13188 809 aaKnown RBP5.86□□□□□ -1.47
VPS4YPR173C RSR1P13856 272 aa5.86□□□□□ -1.47
VPS4YPR173C APE1P14904 514 aa5.86□□□□□ -1.47
VPS4YPR173C AAT2P23542 418 aaKnown RBP5.86□□□□□ -1.47
VPS4YPR173C CIN8P27895 1000 aa5.86□□□□□ -1.47
VPS4YPR173C CRM1P30822 1084 aaKnown RBP5.86□□□□□ -1.47
VPS4YPR173C MEI5P32489 222 aa5.86□□□□□ -1.47
VPS4YPR173C MRPL6P32904 214 aa5.86□□□□□ -1.47
VPS4YPR173C SMY2P32909 740 aaKnown RBP5.86□□□□□ -1.47
VPS4YPR173C VPS21P36017 210 aaKnown RBP5.86□□□□□ -1.47
VPS4YPR173C CAF4P36130 643 aa5.86□□□□□ -1.47
VPS4YPR173C KTR4P38131 464 aa5.86□□□□□ -1.47
VPS4YPR173C ECM13P38195 257 aa5.86□□□□□ -1.47
VPS4YPR173C YBR053CP38235 358 aa5.86□□□□□ -1.47
VPS4YPR173C MUP3P38734 546 aa5.86□□□□□ -1.47
VPS4YPR173C YHR078WP38799 552 aa5.86□□□□□ -1.47
VPS4YPR173C SOP4P39543 234 aaPredicted RBP5.86□□□□□ -1.47
VPS4YPR173C GCD10P41814 478 aa5.86□□□□□ -1.47
VPS4YPR173C COS4P43542 379 aa5.86□□□□□ -1.47
VPS4YPR173C RPS10BP46784 105 aaKnown RBP5.86□□□□□ -1.47
VPS4YPR173C YJR154WP47181 346 aa5.86□□□□□ -1.47
VPS4YPR173C UPF3P48412 387 aaKnown RBP5.86□□□□□ -1.47
VPS4YPR173C NAS6P50086 228 aa5.86□□□□□ -1.47
VPS4YPR173C NCS6P53088 359 aa5.86□□□□□ -1.47
VPS4YPR173C ARO8P53090 500 aaKnown RBP5.86□□□□□ -1.47
VPS4YPR173C SPC105P53148 917 aa5.86□□□□□ -1.47
VPS4YPR173C EFM5P53200 248 aaKnown RBP5.86□□□□□ -1.47
VPS4YPR173C TRS31Q03337 283 aa5.86□□□□□ -1.47
VPS4YPR173C PPN1Q04119 674 aa5.86□□□□□ -1.47
VPS4YPR173C GRX8Q05926 109 aa5.86□□□□□ -1.47
VPS4YPR173C MDM36Q06820 579 aa5.86□□□□□ -1.47
VPS4YPR173C RPS10AQ08745 105 aaPredicted RBP5.86□□□□□ -1.47
VPS4YPR173C UBX3Q12229 455 aa5.86□□□□□ -1.47
VPS4YPR173C HSP42Q12329 375 aa5.86□□□□□ -1.47
VPS4YPR173C AHA1Q12449 350 aaKnown RBP5.86□□□□□ -1.47
VPS4YPR173C MHF2Q3E829 80 aa5.86□□□□□ -1.47
VPS4YPR173C MHF1Q3E835 90 aa5.86□□□□□ -1.47
VPS4YPR173C PUT2P07275 575 aa5.85□□□□□ -1.47
VPS4YPR173C COS2P0CX12 379 aa5.85□□□□□ -1.47
VPS4YPR173C COS3P0CX13 379 aa5.85□□□□□ -1.47
VPS4YPR173C HEM13P11353 328 aaKnown RBP5.85□□□□□ -1.47
VPS4YPR173C CDC34P14682 295 aa5.85□□□□□ -1.47
VPS4YPR173C NSP1P14907 823 aaKnown RBP5.85□□□□□ -1.47
VPS4YPR173C GLN3P18494 730 aa5.85□□□□□ -1.47
VPS4YPR173C VPS33P20795 691 aa5.85□□□□□ -1.47
VPS4YPR173C YCK2P23292 546 aaKnown RBP5.85□□□□□ -1.47
VPS4YPR173C GIT1P25346 518 aa5.85□□□□□ -1.47
VPS4YPR173C PTC6P25646 442 aa5.85□□□□□ -1.47
VPS4YPR173C GAC1P28006 793 aa5.85□□□□□ -1.47
VPS4YPR173C BEM1P29366 551 aa5.85□□□□□ -1.47
VPS4YPR173C SYN8P31377 255 aa5.85□□□□□ -1.47
VPS4YPR173C NTG1P31378 399 aa5.85□□□□□ -1.47
VPS4YPR173C ARP2P32381 391 aaKnown RBP5.85□□□□□ -1.47
VPS4YPR173C STE14P32584 239 aa5.85□□□□□ -1.47
VPS4YPR173C COX13P32799 129 aa5.85□□□□□ -1.47
VPS4YPR173C MRPL7P36519 292 aa5.85□□□□□ -1.47
VPS4YPR173C MRPL17P36528 281 aa5.85□□□□□ -1.47
VPS4YPR173C NEM1P38757 446 aa5.85□□□□□ -1.47
VPS4YPR173C MTG2P38860 518 aa5.85□□□□□ -1.47
VPS4YPR173C YEL020CP39994 560 aa5.85□□□□□ -1.47
VPS4YPR173C TPA1P40032 644 aaKnown RBP5.85□□□□□ -1.47
VPS4YPR173C DDI1P40087 428 aa5.85□□□□□ -1.47
VPS4YPR173C YER186CP40101 306 aa5.85□□□□□ -1.47
VPS4YPR173C PAC11P40960 533 aa5.85□□□□□ -1.47
VPS4YPR173C SLS1P42900 643 aa5.85□□□□□ -1.47
VPS4YPR173C FAR7P43592 221 aa5.85□□□□□ -1.47
VPS4YPR173C HOC1P47124 396 aa5.85□□□□□ -1.47
VPS4YPR173C SAP4P53036 818 aa5.85□□□□□ -1.47
VPS4YPR173C BOL2P53082 120 aa5.85□□□□□ -1.47
VPS4YPR173C GND2P53319 492 aa5.85□□□□□ -1.47
VPS4YPR173C NRD1P53617 575 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47 RIP-Chip
VPS4YPR173C COP1P53622 1201 aaKnown RBP5.85□□□□□ -1.47
VPS4YPR173C IBD2P53892 351 aa5.85□□□□□ -1.47
VPS4YPR173C SIW14P53965 281 aa5.85□□□□□ -1.47
VPS4YPR173C YDR131CQ03899 556 aa5.85□□□□□ -1.47
VPS4YPR173C TIF35Q04067 274 aaKnown RBP5.85□□□□□ -1.47
VPS4YPR173C BCH1Q05029 724 aa5.85□□□□□ -1.47
VPS4YPR173C CRN1Q06440 651 aa5.85□□□□□ -1.47
VPS4YPR173C TDA6Q06466 467 aa5.85□□□□□ -1.47
VPS4YPR173C SYO1Q07395 620 aa5.85□□□□□ -1.47
VPS4YPR173C RCL1Q08096 367 aaPredicted RBP5.85□□□□□ -1.47
VPS4YPR173C RTT10Q08924 1013 aa5.85□□□□□ -1.47
VPS4YPR173C YLR049CQ12110 428 aa5.85□□□□□ -1.47
VPS4YPR173C HUA2Q12134 243 aa5.85□□□□□ -1.47
VPS4YPR173C RAD7P06779 565 aa5.84□□□□□ -1.47
VPS4YPR173C ENA1P13587 1091 aa5.84□□□□□ -1.47
VPS4YPR173C HIR2P32480 875 aa5.84□□□□□ -1.47
VPS4YPR173C PTM1P32857 523 aa5.84□□□□□ -1.47
VPS4YPR173C RPC34P32910 317 aa5.84□□□□□ -1.47
VPS4YPR173C SKT5P34226 696 aa5.84□□□□□ -1.47
VPS4YPR173C ARN2P38724 620 aa5.84□□□□□ -1.47
VPS4YPR173C YHR131CP38835 850 aa5.84□□□□□ -1.47
VPS4YPR173C FHL1P39521 936 aa5.84□□□□□ -1.47
VPS4YPR173C YAR028WP39548 234 aa5.84□□□□□ -1.47
VPS4YPR173C ROK1P45818 564 aaPredicted RBP5.84□□□□□ -1.47
VPS4YPR173C CWC23P52868 283 aaPredicted RBP5.84□□□□□ -1.47
VPS4YPR173C RRT6P53117 311 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms