RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C YBR071WP38243 211 aa2.05□□□□□ -2.08
ATG11YPR049C YHR020WP38708 688 aaKnown RBP2.05□□□□□ -2.08
ATG11YPR049C HYR1P40581 163 aaKnown RBP2.05□□□□□ -2.08
ATG11YPR049C JHD2P47156 728 aaPredicted RBP2.05□□□□□ -2.08
ATG11YPR049C YTM1Q12024 460 aaPredicted RBP2.05□□□□□ -2.08
ATG11YPR049C NUR1Q12066 484 aa2.05□□□□□ -2.08
ATG11YPR049C RPS17AP02407 136 aaKnown RBP2.05□□□□□ -2.08
ATG11YPR049C CDC36P06100 191 aaPredicted RBP2.05□□□□□ -2.08
ATG11YPR049C RPS17BP14127 136 aaKnown RBP2.05□□□□□ -2.08
ATG11YPR049C CPR3P25719 182 aa2.05□□□□□ -2.08
ATG11YPR049C BUB3P26449 341 aa2.05□□□□□ -2.08
ATG11YPR049C EFB1P32471 206 aaKnown RBP2.05□□□□□ -2.08
ATG11YPR049C ATO2P32907 282 aa2.05□□□□□ -2.08
ATG11YPR049C TOM20P35180 183 aa2.05□□□□□ -2.08
ATG11YPR049C SNU114P36048 1008 aaKnown RBP2.05□□□□□ -2.08
ATG11YPR049C YGP1P38616 354 aaKnown RBP2.05□□□□□ -2.08
ATG11YPR049C MSR1P38714 643 aa2.05□□□□□ -2.08
ATG11YPR049C ZIM17P42844 174 aa2.05□□□□□ -2.08
ATG11YPR049C VPS73P53142 486 aaKnown RBP2.05□□□□□ -2.08
ATG11YPR049C MTL1P53214 551 aa2.05□□□□□ -2.08
ATG11YPR049C YLH47Q06493 454 aa2.05□□□□□ -2.08
ATG11YPR049C ENB1Q08299 606 aa2.05□□□□□ -2.08
ATG11YPR049C IZH4Q99393 312 aa2.05□□□□□ -2.08
ATG11YPR049C MET16P18408 261 aaPredicted RBP2.05□□□□□ -2.08
ATG11YPR049C REC107P21651 314 aa2.05□□□□□ -2.08
ATG11YPR049C ELF1P36053 145 aa2.05□□□□□ -2.08
ATG11YPR049C FTH1P38310 465 aa2.05□□□□□ -2.08
ATG11YPR049C SWC5P38326 303 aa2.05□□□□□ -2.08
ATG11YPR049C PET130P47065 347 aa2.05□□□□□ -2.08
ATG11YPR049C TRM12Q04235 462 aa2.05□□□□□ -2.08
ATG11YPR049C HOF1Q05080 669 aa2.05□□□□□ -2.08
ATG11YPR049C SST2P11972 698 aaKnown RBP2.04□□□□□ -2.08
ATG11YPR049C LAT1P12695 482 aaKnown RBP2.04□□□□□ -2.08
ATG11YPR049C PEP5P12868 1029 aa2.04□□□□□ -2.08
ATG11YPR049C CDC26P14724 124 aa2.04□□□□□ -2.08
ATG11YPR049C URE2P23202 354 aaKnown RBP2.04□□□□□ -2.08
ATG11YPR049C MEF1P25039 761 aa2.04□□□□□ -2.08
ATG11YPR049C MTR2P34232 184 aaKnown RBP2.04□□□□□ -2.08
ATG11YPR049C OAR1P35731 278 aa2.04□□□□□ -2.08
ATG11YPR049C GMH1P36125 273 aa2.04□□□□□ -2.08
ATG11YPR049C CTF8P38877 133 aa2.04□□□□□ -2.08
ATG11YPR049C GGC1P38988 300 aa2.04□□□□□ -2.08
ATG11YPR049C YER130CP39959 443 aa2.04□□□□□ -2.08
ATG11YPR049C BPL1P48445 690 aaPredicted RBP2.04□□□□□ -2.08
ATG11YPR049C PAN2P53010 1115 aaPredicted RBP2.04□□□□□ -2.08
ATG11YPR049C VMS1Q04311 632 aaKnown RBP2.04□□□□□ -2.08
ATG11YPR049C YDR222WQ04925 415 aa2.04□□□□□ -2.08
ATG11YPR049C RCN2Q12044 265 aa2.04□□□□□ -2.08
ATG11YPR049C REX3Q12090 404 aa2.04□□□□□ -2.08
ATG11YPR049C PAR32Q12515 295 aaKnown RBP2.04□□□□□ -2.08
ATG11YPR049C NBL1Q3E7Y6 73 aa2.04□□□□□ -2.08
ATG11YPR049C JIP3O13555 125 aa2.04□□□□□ -2.08
ATG11YPR049C YCK1P23291 538 aa2.04□□□□□ -2.08
ATG11YPR049C MSH1P25846 959 aa2.04□□□□□ -2.08
ATG11YPR049C SRB5P32585 307 aa2.04□□□□□ -2.08
ATG11YPR049C MUD2P36084 527 aaKnown RBP2.04□□□□□ -2.08
ATG11YPR049C YBR139WP38109 508 aa2.04□□□□□ -2.08
ATG11YPR049C CYC2P38909 366 aa2.04□□□□□ -2.08
ATG11YPR049C MEP1P40260 492 aa2.04□□□□□ -2.08
ATG11YPR049C PSA1P41940 361 aaKnown RBP2.04□□□□□ -2.08
ATG11YPR049C YFR018CP43599 363 aa2.04□□□□□ -2.08
ATG11YPR049C YJL132WP47014 750 aa2.04□□□□□ -2.08
ATG11YPR049C YGR151CP53287 111 aa2.04□□□□□ -2.08
ATG11YPR049C MCM21Q06675 368 aa2.04□□□□□ -2.08
ATG11YPR049C PUS9Q12069 462 aa2.04□□□□□ -2.08
ATG11YPR049C MRH1Q12117 320 aaPredicted RBP2.04□□□□□ -2.08
ATG11YPR049C AMD1P15274 810 aaKnown RBP2.04□□□□□ -2.08
ATG11YPR049C FRS1P15624 595 aaKnown RBP2.04□□□□□ -2.08
ATG11YPR049C TUP1P16649 713 aa2.04□□□□□ -2.08
ATG11YPR049C YMC1P32331 307 aa2.04□□□□□ -2.08
ATG11YPR049C NUP120P35729 1037 aa2.04□□□□□ -2.08
ATG11YPR049C YSW1P38280 609 aa2.04□□□□□ -2.08
ATG11YPR049C YER189WP40104 122 aa2.04□□□□□ -2.08
ATG11YPR049C XBP1P40489 647 aa2.04□□□□□ -2.08
ATG11YPR049C TEL2P53038 688 aa2.04□□□□□ -2.08
ATG11YPR049C VPS9P54787 451 aa2.04□□□□□ -2.08
ATG11YPR049C YDR415CQ04033 374 aaPredicted RBP2.04□□□□□ -2.08
ATG11YPR049C YDL211CQ12121 372 aa2.04□□□□□ -2.08
ATG11YPR049C NCE102Q12207 173 aaRIP-Chip data2.04□□□□□ -2.08not detected
ATG11YPR049C ADE5,7P07244 802 aaKnown RBP2.03□□□□□ -2.08
ATG11YPR049C RNR2P09938 399 aaKnown RBP2.03□□□□□ -2.08
ATG11YPR049C PMA2P19657 947 aa2.03□□□□□ -2.08
ATG11YPR049C MAL32P38158 584 aa2.03□□□□□ -2.08
ATG11YPR049C PAN6P40459 309 aa2.03□□□□□ -2.08
ATG11YPR049C HOS4P40480 1083 aa2.03□□□□□ -2.08
ATG11YPR049C RRT5P43607 289 aa2.03□□□□□ -2.08
ATG11YPR049C FHN1P53279 174 aa2.03□□□□□ -2.08
ATG11YPR049C RRP45Q05636 305 aaKnown RBP2.03□□□□□ -2.08
ATG11YPR049C YOR012WQ12351 137 aa2.03□□□□□ -2.08
ATG11YPR049C MET8P15807 274 aa2.03□□□□□ -2.08
ATG11YPR049C CLN1P20437 546 aa2.03□□□□□ -2.08
ATG11YPR049C YCR015CP25616 317 aa2.03□□□□□ -2.08
ATG11YPR049C CBF2P32504 956 aa2.03□□□□□ -2.08
ATG11YPR049C BEM3P32873 1128 aa2.03□□□□□ -2.08
ATG11YPR049C UTP20P35194 2493 aaKnown RBP2.03□□□□□ -2.08
ATG11YPR049C DED81P38707 554 aaKnown RBP2.03□□□□□ -2.08
ATG11YPR049C YDR089WP38966 869 aa2.03□□□□□ -2.08
ATG11YPR049C YEL075CP39972 122 aa2.03□□□□□ -2.08
ATG11YPR049C YEL057CP39983 233 aa2.03□□□□□ -2.08
ATG11YPR049C MGS1P40151 587 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms