RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	TVP38	P36164	337 aa		2.8	□□□□□ -1.96
HAA1	YPR008W	BZZ1	P38822	633 aa		2.8	□□□□□ -1.96
HAA1	YPR008W	CAJ1	P39101	391 aa		2.8	□□□□□ -1.96
HAA1	YPR008W	HMF1	P40037	129 aa	Known RBP	2.8	□□□□□ -1.96
HAA1	YPR008W	PFK26	P40433	827 aa	Known RBP	2.8	□□□□□ -1.96
HAA1	YPR008W	SHQ1	P40486	507 aa	Predicted RBP	2.8	□□□□□ -1.96
HAA1	YPR008W	LCB2	P40970	561 aa		2.8	□□□□□ -1.96
HAA1	YPR008W	ATG27	P46989	271 aa		2.8	□□□□□ -1.96
HAA1	YPR008W	CAF130	P53280	1122 aa	Predicted RBP	2.8	□□□□□ -1.96
HAA1	YPR008W	NUP100	Q02629	959 aa		2.8	□□□□□ -1.96
HAA1	YPR008W	YMR321C	Q04898	105 aa		2.8	□□□□□ -1.96
HAA1	YPR008W	YLR281C	Q05863	155 aa		2.8	□□□□□ -1.96
HAA1	YPR008W	ADE13	Q05911	482 aa	Known RBP	2.8	□□□□□ -1.96
HAA1	YPR008W	SEC9	P40357	651 aa		2.79	□□□□□ -1.96
HAA1	YPR008W	EFM4	P40516	257 aa		2.79	□□□□□ -1.96
HAA1	YPR008W	FAF1	P40546	346 aa	Predicted RBP	2.79	□□□□□ -1.96
HAA1	YPR008W	RPS7B	P48164	190 aa	Known RBP	2.79	□□□□□ -1.96
HAA1	YPR008W	APT1	P49435	187 aa	Known RBP	2.79	□□□□□ -1.96
HAA1	YPR008W	CUL3	P53202	744 aa		2.79	□□□□□ -1.96
HAA1	YPR008W	SLD5	Q03406	294 aa		2.79	□□□□□ -1.96
HAA1	YPR008W	GIR2	Q03768	265 aa	Predicted RBP	2.79	□□□□□ -1.96
HAA1	YPR008W	RTT103	Q05543	409 aa		2.79	□□□□□ -1.96
HAA1	YPR008W	COQ9	Q05779	260 aa		2.79	□□□□□ -1.96
HAA1	YPR008W	CSR1	Q06705	408 aa	Known RBP	2.79	□□□□□ -1.96
HAA1	YPR008W	YDL218W	Q07629	317 aa		2.79	□□□□□ -1.96
HAA1	YPR008W	PET123	P17558	318 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	RAD16	P31244	790 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	XRS2	P33301	854 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	YKL023W	P36103	277 aa	Known RBP	2.78	□□□□□ -1.96
HAA1	YPR008W	APE3	P37302	537 aa	Known RBP	2.78	□□□□□ -1.96
HAA1	YPR008W	SMC2	P38989	1170 aa	Known RBP	2.78	□□□□□ -1.96
HAA1	YPR008W	NGL3	Q03210	505 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	CTL1	Q03220	320 aa	Known RBP	2.78	□□□□□ -1.96
HAA1	YPR008W	VPS60	Q03390	229 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	SOV1	Q04748	898 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	YLR297W	Q05899	129 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	YPR078C	Q06813	372 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	RLP24	Q07915	199 aa	Known RBP	2.78	□□□□□ -1.96
HAA1	YPR008W	SMC5	Q08204	1093 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	TY3A-G	Q12173	290 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	NOP58	Q12499	511 aa	Known RBP	2.78	□□□□□ -1.96
HAA1	YPR008W	TY3A-I	Q99219	290 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	FKS1	P38631	1876 aa	Known RBP	2.78	□□□□□ -1.96
HAA1	YPR008W	SNF1	P06782	633 aa	Known RBP	2.78	□□□□□ -1.96
HAA1	YPR008W	RAD57	P25301	460 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	HXT1	P32465	570 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	COT1	P32798	439 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	FMP10	P40098	244 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	SEC24	P40482	926 aa	Known RBP	2.78	□□□□□ -1.96
HAA1	YPR008W	IST3	P40565	148 aa	Predicted RBP	2.78	□□□□□ -1.96
HAA1	YPR008W	SMC3	P47037	1230 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	COS5	P47187	383 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	TIM8	P57744	87 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	DON1	Q05610	365 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	IES4	Q08561	116 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	DAS2	Q12084	232 aa		2.78	□□□□□ -1.96
HAA1	YPR008W	RME1	P32338	300 aa	Known RBP	2.77	□□□□□ -1.97
HAA1	YPR008W	MUD1	P32605	298 aa	Known RBP	2.77	□□□□□ -1.97
HAA1	YPR008W	YEL043W	P32618	956 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	NIP100	P33420	868 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	TFC3	P34111	1160 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	MRPL36	P36531	177 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	SMK1	P41808	388 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	RTT102	P53330	157 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	SML1	Q04964	104 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	RSF1	Q05043	376 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	VAC14	Q06708	880 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	SFI1	Q12369	946 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	GLN3	P18494	730 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	RPB8	P20436	146 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	CKI1	P20485	582 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	PGS1	P25578	521 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	DPB3	P27344	201 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	RPN2	P32565	945 aa	Known RBP	2.77	□□□□□ -1.97
HAA1	YPR008W	SRB4	P32569	687 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	JNM1	P36224	373 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	TCD1	P38756	429 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	SMF1	P38925	575 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	KRE9	P39005	276 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	HSH155	P49955	971 aa	Known RBP	2.77	□□□□□ -1.97
HAA1	YPR008W	SHE10	P53075	577 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	YGR021W	P53212	290 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	BTN2	P53286	410 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	MAL13	P53338	473 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	YNL146W	P53906	100 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	OPY2	Q06810	360 aa		2.77	□□□□□ -1.97
HAA1	YPR008W	POX1	P13711	748 aa		2.76	□□□□□ -1.97
HAA1	YPR008W	GUK1	P15454	187 aa	Known RBP	2.76	□□□□□ -1.97
HAA1	YPR008W	GID7	P25569	745 aa		2.76	□□□□□ -1.97
HAA1	YPR008W	RRP1	P35178	278 aa	Predicted RBP	2.76	□□□□□ -1.97
HAA1	YPR008W	RIM2	P38127	377 aa		2.76	□□□□□ -1.97
HAA1	YPR008W	ANS1	P38832	159 aa		2.76	□□□□□ -1.97
HAA1	YPR008W	PHO90	P39535	881 aa		2.76	□□□□□ -1.97
HAA1	YPR008W	AZF1	P41696	914 aa		2.76	□□□□□ -1.97
HAA1	YPR008W	GUF1	P46943	645 aa		2.76	□□□□□ -1.97
HAA1	YPR008W	YLR352W	Q06479	807 aa		2.76	□□□□□ -1.97
HAA1	YPR008W	TSR1	Q07381	788 aa	Known RBP	2.76	□□□□□ -1.97
HAA1	YPR008W	SIL1	Q08199	421 aa		2.76	□□□□□ -1.97
HAA1	YPR008W	DAP1	Q12091	152 aa		2.76	□□□□□ -1.97
HAA1	YPR008W	CDC33	P07260	213 aa	Known RBP	2.75	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms