RNA–Protein interactions for RNA: YPL190C

NAB3, Transcript of RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeast

Gene NAB3, Length 2,409 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NAB3	YPL190C	GPM2	Q12008	311 aa		2.7	□□□□□ -1.98
NAB3	YPL190C	YLR053C	Q12026	108 aa		2.7	□□□□□ -1.98
NAB3	YPL190C	NMD4	Q12129	218 aa		2.7	□□□□□ -1.98
NAB3	YPL190C	HOS1	Q12214	470 aa		2.7	□□□□□ -1.98
NAB3	YPL190C	HAP2	P06774	265 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	ERG20	P08524	352 aa	Known RBP	2.69	□□□□□ -1.98
NAB3	YPL190C	LRE1	P25579	583 aa	Known RBP	2.69	□□□□□ -1.98
NAB3	YPL190C	URA10	P30402	227 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	SLC1	P33333	303 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	DRE2	P36152	348 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	MRPL7	P36519	292 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	HMT1	P38074	348 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	CTP1	P38152	299 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	SLX1	P38324	304 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	RFC3	P38629	340 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	YHR033W	P38690	423 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	FSH1	P38777	243 aa	Known RBP	2.69	□□□□□ -1.98
NAB3	YPL190C	PPE1	P38796	400 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	ARB1	P40024	610 aa	Known RBP	2.69	□□□□□ -1.98
NAB3	YPL190C	BAP3	P41815	604 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	ARC1	P46672	376 aa	Known RBP	2.69	□□□□□ -1.98
NAB3	YPL190C	STB4	P50104	949 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	ALT2	P52892	507 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	MIG2	P53035	382 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	MCM6	P53091	1017 aa	Known RBP	2.69	□□□□□ -1.98
NAB3	YPL190C	DUO1	P53168	247 aa	Known RBP	2.69	□□□□□ -1.98
NAB3	YPL190C	BIO4	P53630	237 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	NGL2	Q03264	515 aa	Known RBP	2.69	□□□□□ -1.98
NAB3	YPL190C	GRX3	Q03835	250 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	VBA4	Q04602	768 aa	Known RBP	2.69	□□□□□ -1.98
NAB3	YPL190C	ENT4	Q07872	247 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	OSW1	Q08692	278 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	TGL5	Q12043	749 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	SPE3	Q12074	293 aa	Known RBP	2.69	□□□□□ -1.98
NAB3	YPL190C	TRM13	Q12383	476 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	HSH49	Q99181	213 aa	Predicted RBP	2.69	□□□□□ -1.98
NAB3	YPL190C	RAD3	P06839	778 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	YMR085W	P0CF18	432 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
NAB3	YPL190C	AMD2	P22580	549 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	YSP3	P25036	478 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	GID7	P25569	745 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	HRR25	P29295	494 aa	Known RBP	2.69	□□□□□ -1.98
NAB3	YPL190C	KES1	P35844	434 aa	Known RBP	2.69	□□□□□ -1.98
NAB3	YPL190C	TSC10	P38342	320 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	OTU2	P38747	307 aa	Known RBP	2.69	□□□□□ -1.98
NAB3	YPL190C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
NAB3	YPL190C	YJL132W	P47014	750 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	ILM1	P47155	203 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	MTL1	P53214	551 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	SPC98	P53540	846 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	KTR6	P54070	446 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	YMR155W	Q03795	547 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	CDA2	Q06703	312 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	PGC1	Q08959	321 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	NBP2	Q12163	236 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	LCB4	Q12246	624 aa		2.69	□□□□□ -1.98
NAB3	YPL190C	ARG3	P05150	338 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	MET3	P08536	511 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	YCK1	P23291	538 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	VPH1	P32563	840 aa	Known RBP	2.68	□□□□□ -1.98
NAB3	YPL190C	DSS4	P32601	143 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	TFC3	P34111	1160 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	SIP2	P34164	415 aa	Known RBP	2.68	□□□□□ -1.98
NAB3	YPL190C	HEL1	P36113	551 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	FZO1	P38297	855 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	YBP1	P38315	674 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	PEP8	P40335	379 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	SEC28	P40509	296 aa	Known RBP	2.68	□□□□□ -1.98
NAB3	YPL190C	NAS2	P40555	220 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	CDC1	P40986	491 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	SNG1	P46950	547 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	NNF2	P53253	936 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	MEH1	Q02205	184 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	INP2	Q03824	705 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	CTK1	Q03957	528 aa	Known RBP	2.68	□□□□□ -1.98
NAB3	YPL190C	PPN1	Q04119	674 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	GTB1	Q04924	702 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	ARP9	Q05123	467 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	HRD3	Q05787	833 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	AAD15	Q08361	143 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	DIA2	Q08496	732 aa	Predicted RBP	2.68	□□□□□ -1.98
NAB3	YPL190C	PKH2	Q12236	1081 aa	Known RBP	2.68	□□□□□ -1.98
NAB3	YPL190C	EFG1	Q3E705	233 aa	Known RBP	2.68	□□□□□ -1.98
NAB3	YPL190C	MIS1	P09440	975 aa	Known RBP	2.68	□□□□□ -1.98
NAB3	YPL190C	TY2A-LR1	P0C2J4	438 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	TY2A-F	P0CX61	438 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	TY2A-GR2	P0CX62	438 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	RED1	P14291	827 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	CKA1	P15790	372 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	TY2A-C	P25383	438 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	CSE2	P33308	149 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	PEX5	P35056	612 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	SDS22	P36047	338 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	MUM2	P38236	366 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	GIP4	P39732	760 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
NAB3	YPL190C	YFL012W	P43580	148 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	COG1	P53079	417 aa		2.68	□□□□□ -1.98
NAB3	YPL190C	YGR127W	P53275	312 aa		2.68	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms