RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	FMP10	P40098	244 aa		2.23	□□□□□ -2.05
RUD3	YOR216C	LYS14	P40971	790 aa		2.23	□□□□□ -2.05
RUD3	YOR216C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.23	□□□□□ -2.05	RIP-Chip
RUD3	YOR216C	YJL055W	P47044	245 aa		2.23	□□□□□ -2.05
RUD3	YOR216C	BSC5	P53755	489 aa		2.23	□□□□□ -2.05
RUD3	YOR216C	VPS9	P54787	451 aa		2.23	□□□□□ -2.05
RUD3	YOR216C	RSM23	Q01163	450 aa		2.23	□□□□□ -2.05
RUD3	YOR216C	TSA2	Q04120	196 aa		2.23	□□□□□ -2.05
RUD3	YOR216C	MFB1	Q04922	465 aa		2.23	□□□□□ -2.05
RUD3	YOR216C	MRPL51	Q06090	140 aa	Predicted RBP	2.23	□□□□□ -2.05
RUD3	YOR216C	PGC1	Q08959	321 aa		2.23	□□□□□ -2.05
RUD3	YOR216C	HUA2	Q12134	243 aa		2.23	□□□□□ -2.05
RUD3	YOR216C	SEC53	P07283	254 aa	Known RBP	2.22	□□□□□ -2.05
RUD3	YOR216C	CKA1	P15790	372 aa		2.22	□□□□□ -2.05
RUD3	YOR216C	TRX1	P22217	103 aa	Known RBP	2.22	□□□□□ -2.05
RUD3	YOR216C	PRE8	P23639	250 aa		2.22	□□□□□ -2.05
RUD3	YOR216C	ERG8	P24521	451 aa		2.22	□□□□□ -2.05
RUD3	YOR216C	MRP4	P32902	394 aa		2.22	□□□□□ -2.05
RUD3	YOR216C	MDL1	P33310	695 aa		2.22	□□□□□ -2.05
RUD3	YOR216C	MTR2	P34232	184 aa	Known RBP	2.22	□□□□□ -2.05
RUD3	YOR216C	UTH1	P36135	365 aa		2.22	□□□□□ -2.05
RUD3	YOR216C	DIA4	P38705	446 aa	Predicted RBP	2.22	□□□□□ -2.05
RUD3	YOR216C	TIF4631	P39935	952 aa	Known RBP	2.22	□□□□□ -2.05
RUD3	YOR216C	REE1	P40893	198 aa		2.22	□□□□□ -2.05
RUD3	YOR216C	RMD8	P43620	662 aa		2.22	□□□□□ -2.05
RUD3	YOR216C	ERG26	P53199	349 aa	Known RBP	2.22	□□□□□ -2.05
RUD3	YOR216C	YMR111C	Q04461	462 aa	Predicted RBP	2.22	□□□□□ -2.05
RUD3	YOR216C	RRP9	Q06506	573 aa	Known RBP	2.22	□□□□□ -2.05
RUD3	YOR216C	ECM30	Q06673	1274 aa		2.22	□□□□□ -2.05
RUD3	YOR216C	SMF3	Q12078	473 aa	Predicted RBP	2.22	□□□□□ -2.05
RUD3	YOR216C	INO80	P53115	1489 aa		2.22	□□□□□ -2.05
RUD3	YOR216C	OCA4	P25366	362 aa		2.21	□□□□□ -2.06
RUD3	YOR216C	IFA38	P38286	347 aa		2.21	□□□□□ -2.06
RUD3	YOR216C	YBR225W	P38321	900 aa		2.21	□□□□□ -2.06
RUD3	YOR216C	SEC28	P40509	296 aa	Known RBP	2.21	□□□□□ -2.06
RUD3	YOR216C	REG1	Q00816	1014 aa		2.21	□□□□□ -2.06
RUD3	YOR216C	TLG1	Q03322	224 aa		2.21	□□□□□ -2.06
RUD3	YOR216C	YMR155W	Q03795	547 aa		2.21	□□□□□ -2.06
RUD3	YOR216C	RTT109	Q07794	436 aa		2.21	□□□□□ -2.06
RUD3	YOR216C	RTN2	Q12443	393 aa		2.21	□□□□□ -2.06
RUD3	YOR216C	YLR302C	O13544	120 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	RPC40	P07703	335 aa	Known RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	CDC24	P11433	854 aa	Predicted RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	OLE1	P21147	510 aa	Known RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	CLB3	P24870	427 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	ROX1	P25042	368 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	RVS161	P25343	265 aa	Known RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	GPI10	P30777	616 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	DPH2	P32461	534 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	APE3	P37302	537 aa	Known RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	YBL029W	P38201	376 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	ELO1	P39540	310 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	GDI1	P39958	451 aa	Known RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	LSM5	P40089	93 aa	Known RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	IST3	P40565	148 aa	Predicted RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	IME4	P41833	600 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	SHY1	P53266	389 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	JJJ1	P53863	590 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	NCS2	P53923	493 aa	Predicted RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	ADA2	Q02336	434 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	PEX25	Q02969	394 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	SNO4	Q04902	237 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	HSP33	Q08914	237 aa	Known RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	HSP32	Q08992	237 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	TRM8	Q12009	286 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	RCN2	Q12044	265 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	PAR32	Q12515	295 aa	Known RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	YRF1-4	O13559	1382 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	YBR085C-A	O43137	85 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	ARG3	P05150	338 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	HEM15	P16622	393 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	PWP1	P21304	576 aa	Known RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	REC107	P21651	314 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	MNE1	P24720	663 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	PEP3	P27801	918 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	ERG3	P32353	365 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	PUP2	P32379	260 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	MRP21	P38175	177 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	PSD1	P39006	500 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	BUR6	P40096	142 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	LCB2	P40970	561 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	SSU1	P41930	458 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	ARC1	P46672	376 aa	Known RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	FYV8	P46949	817 aa	Known RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	ALT2	P52892	507 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	DUO1	P53168	247 aa	Known RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	BUD32	P53323	261 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	ARE2	P53629	642 aa	Known RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	HST1	P53685	503 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	SLD5	Q03406	294 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	YMR027W	Q04371	470 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	AIM32	Q04689	311 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	CUE5	Q08412	411 aa	Known RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	NOP58	Q12499	511 aa	Known RBP	2.2	□□□□□ -2.06
RUD3	YOR216C	YBR126W-A	Q8TGU7	68 aa		2.2	□□□□□ -2.06
RUD3	YOR216C	MET17	P06106	444 aa		2.19	□□□□□ -2.06
RUD3	YOR216C	GLK1	P17709	500 aa	Known RBP	2.19	□□□□□ -2.06
RUD3	YOR216C	SMI1	P32566	505 aa		2.19	□□□□□ -2.06
RUD3	YOR216C	RRT6	P53117	311 aa	Predicted RBP	2.19	□□□□□ -2.06
RUD3	YOR216C	ART5	P53244	586 aa	Known RBP	2.19	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms