RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C BOL3P39724 118 aa7.25□□□□□ -1.25
RUP1YOR138C COG3P40094 801 aa7.25□□□□□ -1.25
RUP1YOR138C REF2P42073 533 aaPredicted RBP7.25□□□□□ -1.25
RUP1YOR138C EMI1Q04406 187 aa7.25□□□□□ -1.25
RUP1YOR138C SSL1Q04673 461 aaPredicted RBP7.25□□□□□ -1.25
RUP1YOR138C PEX10Q05568 337 aa7.25□□□□□ -1.25
RUP1YOR138C YLR225CQ05948 407 aaKnown RBP7.25□□□□□ -1.25
RUP1YOR138C EMG1Q06287 252 aaKnown RBP7.25□□□□□ -1.25
RUP1YOR138C GRS2Q06817 618 aa7.25□□□□□ -1.25
RUP1YOR138C HBT1Q07653 1046 aaKnown RBP7.25□□□□□ -1.25
RUP1YOR138C MLH3Q12083 715 aa7.25□□□□□ -1.25
RUP1YOR138C MNL2Q12205 849 aa7.25□□□□□ -1.25
RUP1YOR138C YLR126CQ12288 251 aa7.25□□□□□ -1.25
RUP1YOR138C PBS2P08018 668 aa7.25□□□□□ -1.25
RUP1YOR138C SCH9P11792 824 aaKnown RBP7.25□□□□□ -1.25
RUP1YOR138C VPS33P20795 691 aa7.25□□□□□ -1.25
RUP1YOR138C RHB1P25378 209 aa7.25□□□□□ -1.25
RUP1YOR138C MRPL9P31334 269 aa7.25□□□□□ -1.25
RUP1YOR138C ACH1P32316 526 aa7.25□□□□□ -1.25
RUP1YOR138C HIR2P32480 875 aa7.25□□□□□ -1.25
RUP1YOR138C MRPL6P32904 214 aa7.25□□□□□ -1.25
RUP1YOR138C SCD5P34758 872 aa7.25□□□□□ -1.25
RUP1YOR138C AHP1P38013 176 aaKnown RBP7.25□□□□□ -1.25
RUP1YOR138C SEA4P38164 1038 aa7.25□□□□□ -1.25
RUP1YOR138C MPT5P39016 859 aaKnown RBP RIP-Chip data7.25□□□□□ -1.25not detected
RUP1YOR138C SOP4P39543 234 aaPredicted RBP7.25□□□□□ -1.25
RUP1YOR138C SPF1P39986 1215 aaKnown RBP7.25□□□□□ -1.25
RUP1YOR138C GLG2P47011 380 aa7.25□□□□□ -1.25
RUP1YOR138C PET130P47065 347 aa7.25□□□□□ -1.25
RUP1YOR138C YNL143CP53908 130 aa7.25□□□□□ -1.25
RUP1YOR138C IDP3P53982 420 aaKnown RBP7.25□□□□□ -1.25
RUP1YOR138C PEX13P80667 386 aa7.25□□□□□ -1.25
RUP1YOR138C ECM11Q04110 302 aa7.25□□□□□ -1.25
RUP1YOR138C NGL1Q08213 363 aaKnown RBP7.25□□□□□ -1.25
RUP1YOR138C GSH2Q08220 491 aa7.25□□□□□ -1.25
RUP1YOR138C MAM3Q12296 706 aa7.25□□□□□ -1.25
RUP1YOR138C TRM10Q12400 293 aa7.25□□□□□ -1.25
RUP1YOR138C RIB3Q99258 208 aa7.25□□□□□ -1.25
RUP1YOR138C SPT3P06844 337 aa7.24□□□□□ -1.25
RUP1YOR138C NFT1P0CE68 1218 aa7.24□□□□□ -1.25
RUP1YOR138C HMG2P12684 1045 aa7.24□□□□□ -1.25
RUP1YOR138C DAP2P18962 818 aa7.24□□□□□ -1.25
RUP1YOR138C YBR284WP38150 797 aa7.24□□□□□ -1.25
RUP1YOR138C ECM13P38195 257 aa7.24□□□□□ -1.25
RUP1YOR138C DLD3P39976 496 aaKnown RBP7.24□□□□□ -1.25
RUP1YOR138C LAS21P40367 830 aa7.24□□□□□ -1.25
RUP1YOR138C GAB1P41733 394 aa7.24□□□□□ -1.25
RUP1YOR138C UFE1P41834 346 aa7.24□□□□□ -1.25
RUP1YOR138C MRX6P48564 524 aa7.24□□□□□ -1.25
RUP1YOR138C DAM1P53267 343 aa7.24□□□□□ -1.25
RUP1YOR138C COQ6P53318 479 aa7.24□□□□□ -1.25
RUP1YOR138C DBP9Q06218 594 aaKnown RBP7.24□□□□□ -1.25
RUP1YOR138C MCP2Q06567 569 aa7.24□□□□□ -1.25
RUP1YOR138C THP1Q08231 455 aa7.24□□□□□ -1.25
RUP1YOR138C YGK3Q12222 375 aaPredicted RBP7.24□□□□□ -1.25
RUP1YOR138C RPN5Q12250 445 aaKnown RBP7.24□□□□□ -1.25
RUP1YOR138C TY4B-PA0A0B7P3V8 1104 aa7.23□□□□□ -1.25
RUP1YOR138C KAR1P11927 433 aa7.23□□□□□ -1.25
RUP1YOR138C FUB1P25659 250 aa7.23□□□□□ -1.25
RUP1YOR138C PRP19P32523 503 aaKnown RBP7.23□□□□□ -1.25
RUP1YOR138C RIB1P38066 345 aa7.23□□□□□ -1.25
RUP1YOR138C ARN2P38724 620 aa7.23□□□□□ -1.25
RUP1YOR138C SOK1P40317 901 aa7.23□□□□□ -1.25
RUP1YOR138C GTS1P40956 396 aa7.23□□□□□ -1.25
RUP1YOR138C YFL066CP43538 392 aa7.23□□□□□ -1.25
RUP1YOR138C TOM22P49334 152 aa7.23□□□□□ -1.25
RUP1YOR138C AMA1P50082 593 aa7.23□□□□□ -1.25
RUP1YOR138C MAK3Q03503 176 aa7.23□□□□□ -1.25
RUP1YOR138C HER2Q03557 464 aa7.23□□□□□ -1.25
RUP1YOR138C NEJ1Q06148 342 aa7.23□□□□□ -1.25
RUP1YOR138C MFG1Q07684 458 aa7.23□□□□□ -1.25
RUP1YOR138C ICL2Q12031 575 aa7.23□□□□□ -1.25
RUP1YOR138C RBD2Q12270 262 aa7.23□□□□□ -1.25
RUP1YOR138C SUT2Q12286 268 aa7.23□□□□□ -1.25
RUP1YOR138C LPX1Q12405 387 aaKnown RBP7.23□□□□□ -1.25
RUP1YOR138C YDL199CQ12407 687 aa7.23□□□□□ -1.25
RUP1YOR138C LDB19Q12502 818 aa7.23□□□□□ -1.25
RUP1YOR138C RPL6BP05739 176 aaKnown RBP7.23□□□□□ -1.25
RUP1YOR138C CDC21P06785 304 aa7.23□□□□□ -1.25
RUP1YOR138C SST2P11972 698 aaKnown RBP7.23□□□□□ -1.25
RUP1YOR138C STB6P36085 766 aa7.23□□□□□ -1.25
RUP1YOR138C YLF2P38746 405 aa7.23□□□□□ -1.25
RUP1YOR138C YEL020CP39994 560 aa7.23□□□□□ -1.25
RUP1YOR138C DIE2P50076 525 aa7.23□□□□□ -1.25
RUP1YOR138C COG1P53079 417 aa7.23□□□□□ -1.25
RUP1YOR138C NUP49Q02199 472 aa7.23□□□□□ -1.25
RUP1YOR138C RRP17Q04031 235 aaPredicted RBP7.23□□□□□ -1.25
RUP1YOR138C NUT2Q06213 157 aa7.23□□□□□ -1.25
RUP1YOR138C RAD34Q06665 692 aa7.23□□□□□ -1.25
RUP1YOR138C SAM4Q08985 325 aaKnown RBP7.23□□□□□ -1.25
RUP1YOR138C SCM3Q12334 223 aa7.23□□□□□ -1.25
RUP1YOR138C PST2Q12335 198 aaKnown RBP7.23□□□□□ -1.25
RUP1YOR138C PRI2P20457 528 aa7.22□□□□□ -1.25
RUP1YOR138C KGD1P20967 1014 aaKnown RBP7.22□□□□□ -1.25
RUP1YOR138C MIH1P23748 554 aa7.22□□□□□ -1.25
RUP1YOR138C COQ8P27697 501 aa7.22□□□□□ -1.25
RUP1YOR138C GLG1P36143 616 aa7.22□□□□□ -1.25
RUP1YOR138C GDH3P39708 457 aa7.22□□□□□ -1.25
RUP1YOR138C TPA1P40032 644 aaKnown RBP7.22□□□□□ -1.25
RUP1YOR138C PAN6P40459 309 aa7.22□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms