RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeastyeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCS7YMR272C PEX25Q02969 394 aa6.09□□□□□ -1.43
SCS7YMR272C CTK1Q03957 528 aaKnown RBP6.09□□□□□ -1.43
SCS7YMR272C MUS81Q04149 632 aaPredicted RBP6.09□□□□□ -1.43
SCS7YMR272C PNP1Q05788 311 aa6.09□□□□□ -1.43
SCS7YMR272C BOP2Q06150 570 aa6.09□□□□□ -1.43
SCS7YMR272C YLL054CQ12244 843 aa6.09□□□□□ -1.43
SCS7YMR272C ATG34Q12292 412 aa6.09□□□□□ -1.43
SCS7YMR272C YVC1Q12324 675 aa6.09□□□□□ -1.43
SCS7YMR272C YLR111WQ12528 110 aa6.09□□□□□ -1.43
SCS7YMR272C IRA1P18963 3092 aa6.08□□□□□ -1.44
SCS7YMR272C IPP1P00817 287 aaKnown RBP6.08□□□□□ -1.44
SCS7YMR272C PRT1P06103 763 aaKnown RBP6.08□□□□□ -1.44
SCS7YMR272C RPS4AP0CX35 261 aaKnown RBP6.08□□□□□ -1.44
SCS7YMR272C RPS4BP0CX36 261 aaKnown RBP6.08□□□□□ -1.44
SCS7YMR272C BAS1P22035 811 aa6.08□□□□□ -1.44
SCS7YMR272C NAR1P23503 491 aaKnown RBP6.08□□□□□ -1.44
SCS7YMR272C SEC14P24280 304 aaKnown RBP6.08□□□□□ -1.44
SCS7YMR272C ORC2P32833 620 aa6.08□□□□□ -1.44
SCS7YMR272C UGP1P32861 499 aaKnown RBP6.08□□□□□ -1.44
SCS7YMR272C LOS1P33418 1100 aaPredicted RBP6.08□□□□□ -1.44
SCS7YMR272C SDH3P33421 198 aa6.08□□□□□ -1.44
SCS7YMR272C OAF3P36023 863 aa6.08□□□□□ -1.44
SCS7YMR272C YHB1P39676 399 aaKnown RBP6.08□□□□□ -1.44
SCS7YMR272C YIL086CP40503 102 aa6.08□□□□□ -1.44
SCS7YMR272C VMA13P41807 478 aaKnown RBP6.08□□□□□ -1.44
SCS7YMR272C FAR3P46671 204 aa6.08□□□□□ -1.44
SCS7YMR272C TIM54P47045 478 aa6.08□□□□□ -1.44
SCS7YMR272C LIA1P47120 325 aaKnown RBP6.08□□□□□ -1.44
SCS7YMR272C YJR142WP47173 342 aa6.08□□□□□ -1.44
SCS7YMR272C SNP1Q00916 300 aaPredicted RBP6.08□□□□□ -1.44
SCS7YMR272C RMI1Q02685 241 aa6.08□□□□□ -1.44
SCS7YMR272C USA1Q03714 838 aa6.08□□□□□ -1.44
SCS7YMR272C REX3Q12090 404 aa6.08□□□□□ -1.44
SCS7YMR272C NMD4Q12129 218 aa6.08□□□□□ -1.44
SCS7YMR272C HSP42Q12329 375 aa6.08□□□□□ -1.44
SCS7YMR272C PST1Q12355 444 aa6.08□□□□□ -1.44
SCS7YMR272C PHO5P00635 467 aa6.07□□□□□ -1.44
SCS7YMR272C STE7P06784 515 aa6.07□□□□□ -1.44
SCS7YMR272C ARD1P07347 238 aaPredicted RBP6.07□□□□□ -1.44
SCS7YMR272C YCR006CP25350 157 aa6.07□□□□□ -1.44
SCS7YMR272C MLS1P30952 554 aa6.07□□□□□ -1.44
SCS7YMR272C SIN4P32259 974 aa6.07□□□□□ -1.44
SCS7YMR272C DCG1P32460 244 aa6.07□□□□□ -1.44
SCS7YMR272C HXT4P32467 576 aa6.07□□□□□ -1.44
SCS7YMR272C PDB1P32473 366 aaKnown RBP6.07□□□□□ -1.44
SCS7YMR272C CDC5P32562 705 aa6.07□□□□□ -1.44
SCS7YMR272C RPS1AP33442 255 aaKnown RBP6.07□□□□□ -1.44
SCS7YMR272C KKQ8P36004 724 aa6.07□□□□□ -1.44
SCS7YMR272C SET3P36124 751 aa6.07□□□□□ -1.44
SCS7YMR272C YCR087C-AP37263 153 aa6.07□□□□□ -1.44
SCS7YMR272C YBR071WP38243 211 aa6.07□□□□□ -1.44
SCS7YMR272C LIN1P38852 340 aaPredicted RBP6.07□□□□□ -1.44
SCS7YMR272C HXT6P39003 570 aaKnown RBP6.07□□□□□ -1.44
SCS7YMR272C HXT7P39004 570 aa6.07□□□□□ -1.44
SCS7YMR272C MET30P39014 640 aa6.07□□□□□ -1.44
SCS7YMR272C PLB1P39105 664 aa6.07□□□□□ -1.44
SCS7YMR272C VPS52P39904 641 aa6.07□□□□□ -1.44
SCS7YMR272C MGS1P40151 587 aa6.07□□□□□ -1.44
SCS7YMR272C SMX2P40204 77 aaKnown RBP6.07□□□□□ -1.44
SCS7YMR272C MET18P40469 1032 aa6.07□□□□□ -1.44
SCS7YMR272C YIL001WP40560 513 aa6.07□□□□□ -1.44
SCS7YMR272C PAC11P40960 533 aa6.07□□□□□ -1.44
SCS7YMR272C GTR2P53290 341 aa6.07□□□□□ -1.44
SCS7YMR272C SLM2P53955 656 aa6.07□□□□□ -1.44
SCS7YMR272C LSM3P57743 89 aaKnown RBP6.07□□□□□ -1.44
SCS7YMR272C IRC15Q02733 499 aa6.07□□□□□ -1.44
SCS7YMR272C ELP4Q02884 456 aaKnown RBP6.07□□□□□ -1.44
SCS7YMR272C YOL073CQ08232 322 aa6.07□□□□□ -1.44
SCS7YMR272C GPN2Q08726 347 aaPredicted RBP6.07□□□□□ -1.44
SCS7YMR272C YLR053CQ12026 108 aa6.07□□□□□ -1.44
SCS7YMR272C YPL066WQ12194 479 aa6.07□□□□□ -1.44
SCS7YMR272C YCL012CQ8J0M4 134 aa6.07□□□□□ -1.44
SCS7YMR272C ILV2P07342 687 aaKnown RBP6.06□□□□□ -1.44
SCS7YMR272C CBS2P14905 389 aa6.06□□□□□ -1.44
SCS7YMR272C HSC82P15108 705 aaKnown RBP6.06□□□□□ -1.44
SCS7YMR272C PRP2P20095 876 aaPredicted RBP6.06□□□□□ -1.44
SCS7YMR272C CDC10P25342 322 aaKnown RBP6.06□□□□□ -1.44
SCS7YMR272C MKK2P32491 506 aa6.06□□□□□ -1.44
SCS7YMR272C LRG1P35688 1017 aa6.06□□□□□ -1.44
SCS7YMR272C OMA1P36163 345 aa6.06□□□□□ -1.44
SCS7YMR272C RIO2P40160 425 aaKnown RBP6.06□□□□□ -1.44
SCS7YMR272C URB2P47108 1174 aa6.06□□□□□ -1.44
SCS7YMR272C NOP19P53317 196 aaPredicted RBP6.06□□□□□ -1.44
SCS7YMR272C UBX4P54730 416 aa6.06□□□□□ -1.44
SCS7YMR272C YMR209CQ03648 457 aa6.06□□□□□ -1.44
SCS7YMR272C TRS23Q03784 219 aa6.06□□□□□ -1.44
SCS7YMR272C MDM30Q05930 598 aa6.06□□□□□ -1.44
SCS7YMR272C YPL272CQ08984 517 aa6.06□□□□□ -1.44
SCS7YMR272C YMR030W-AQ3E760 96 aa6.06□□□□□ -1.44
SCS7YMR272C RPL7AP05737 244 aaKnown RBP6.05□□□□□ -1.44
SCS7YMR272C COR1P07256 457 aa6.05□□□□□ -1.44
SCS7YMR272C RPS21AP0C0V8 87 aaKnown RBP6.05□□□□□ -1.44
SCS7YMR272C PRP4P20053 465 aaKnown RBP6.05□□□□□ -1.44
SCS7YMR272C PRI2P20457 528 aa6.05□□□□□ -1.44
SCS7YMR272C FUN30P31380 1131 aa6.05□□□□□ -1.44
SCS7YMR272C ERG1P32476 496 aaKnown RBP6.05□□□□□ -1.44
SCS7YMR272C NUP120P35729 1037 aa6.05□□□□□ -1.44
SCS7YMR272C YBR062CP38239 180 aa6.05□□□□□ -1.44
SCS7YMR272C YHR210CP38893 341 aa6.05□□□□□ -1.44
SCS7YMR272C MBP1P39678 833 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms