RNA–Protein interactions for RNA: YMR231W

PEP5, Transcript of Histone E3 ligase, component of CORVET membrane tethering complex, yeast

Gene PEP5, Length 3,090 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP5	YMR231W	SOK2	P53438	785 aa	Predicted RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	HHO1	P53551	258 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
PEP5	YMR231W	DBP10	Q12389	995 aa	Known RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	PSF1	Q12488	208 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	IPP1	P00817	287 aa	Known RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	HTA1	P04911	132 aa	Known RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	ATP1	P07251	545 aa	Known RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	SGV1	P23293	657 aa	Known RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	RHB1	P25378	209 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	LIP5	P32875	414 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	IMP3	P32899	183 aa	Predicted RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	REG2	P38232	338 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	YAR028W	P39548	234 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	SLX8	P40072	274 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	GYP8	P43570	497 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	AIM23	P47015	356 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	YAE1	P47118	141 aa	Predicted RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	YJR154W	P47181	346 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	KEL2	P50090	882 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	AIM36	Q03798	255 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	RKM2	Q03942	479 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	TIF35	Q04067	274 aa	Known RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	BCH1	Q05029	724 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	ATG29	Q12092	213 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	URA3	P03962	267 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	RPB4	P20433	221 aa	Predicted RBP	4.22	□□□□□ -1.73
PEP5	YMR231W	DBF2	P22204	572 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	VPS34	P22543	875 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	HIR2	P32480	875 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	THI80	P35202	319 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	RMA1	P36001	430 aa	Known RBP	4.22	□□□□□ -1.73
PEP5	YMR231W	CBT1	P36038	271 aa	Predicted RBP	4.22	□□□□□ -1.73
PEP5	YMR231W	YBL029W	P38201	376 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	CBR1	P38626	284 aa	Known RBP	4.22	□□□□□ -1.73
PEP5	YMR231W	SRP68	P38687	599 aa	Known RBP	4.22	□□□□□ -1.73
PEP5	YMR231W	HSE1	P38753	452 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	NMD3	P38861	518 aa	Known RBP	4.22	□□□□□ -1.73
PEP5	YMR231W	SHU2	P38957	223 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	RCY1	P39531	840 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	ACO2	P39533	789 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	GIP4	P39732	760 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	YKE4	P40544	346 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	GDS1	P41913	522 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	ALB1	P47019	175 aa	Predicted RBP	4.22	□□□□□ -1.73
PEP5	YMR231W	HMS2	P47175	358 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	FPK1	P53739	893 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	MPS1	P54199	764 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	SDH1	Q00711	640 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	RCO1	Q04779	684 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	YPL066W	Q12194	479 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	RPP1B	P10622	106 aa	Known RBP	4.22	□□□□□ -1.73
PEP5	YMR231W	NHP6B	P11633	99 aa	Known RBP	4.22	□□□□□ -1.73
PEP5	YMR231W	GLN4	P13188	809 aa	Known RBP	4.22	□□□□□ -1.73
PEP5	YMR231W	RPL3	P14126	387 aa	Known RBP	4.22	□□□□□ -1.73
PEP5	YMR231W	AIM26	P32858	118 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	SKT5	P34226	696 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	LOT5	P34234	306 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	YRO2	P38079	344 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	UBA4	P38820	440 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	AXL2	P38928	823 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	KTR7	P40504	517 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	PMT4	P46971	762 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	IRC18	P47056	224 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	AAD10	P47182	288 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	TOM22	P49334	152 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	STB4	P50104	949 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	NQM1	P53228	333 aa	Predicted RBP	4.22	□□□□□ -1.73
PEP5	YMR231W	YGR266W	P53326	701 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	SFB2	P53953	876 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	CDC14	Q00684	551 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	NSE5	Q03718	556 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	SVF1	Q05515	481 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	COA4	Q05809	96 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	AAD4	Q07747	329 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	RAX1	Q08760	435 aa		4.22	□□□□□ -1.73
PEP5	YMR231W	HIS3	P06633	220 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	LAT1	P12695	482 aa	Known RBP	4.21	□□□□□ -1.74
PEP5	YMR231W	MF(ALPHA)2	P32435	120 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	PEP12	P32854	288 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	CCZ1	P38273	704 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	YEL028W	P39989	153 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	EDC3	P39998	551 aa	Known RBP	4.21	□□□□□ -1.74
PEP5	YMR231W	PTR3	P43606	678 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	EFM3	P47163	339 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	NUP100	Q02629	959 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	ELP3	Q02908	557 aa	Known RBP	4.21	□□□□□ -1.74
PEP5	YMR231W	GCN5	Q03330	439 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	TRS31	Q03337	283 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	FIN1	Q03898	291 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	SHS1	Q07657	551 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
PEP5	YMR231W	RPN6	Q12377	434 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	YBL113C	Q7M4S9	792 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	CDC4	P07834	779 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	MOD5	P07884	428 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	VPS33	P20795	691 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	YBR284W	P38150	797 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	APE4	P38821	490 aa		4.21	□□□□□ -1.74
PEP5	YMR231W	VMA7	P39111	118 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms