RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C COS10P52924 374 aa4.9□□□□□ -1.63
PEX12YMR026C MDM1Q01846 1127 aa4.9□□□□□ -1.63
PEX12YMR026C IRC15Q02733 499 aa4.9□□□□□ -1.63
PEX12YMR026C MRD1Q06106 887 aaKnown RBP4.9□□□□□ -1.63
PEX12YMR026C VPS74Q06385 345 aa4.9□□□□□ -1.63
PEX12YMR026C CFT2Q12102 859 aaPredicted RBP4.9□□□□□ -1.63
PEX12YMR026C INH1P01097 85 aa4.89□□□□□ -1.63
PEX12YMR026C GDH1P07262 454 aaKnown RBP4.89□□□□□ -1.63
PEX12YMR026C PRP16P15938 1071 aaPredicted RBP4.89□□□□□ -1.63
PEX12YMR026C GLK1P17709 500 aaKnown RBP4.89□□□□□ -1.63
PEX12YMR026C EXO70P19658 623 aa4.89□□□□□ -1.63
PEX12YMR026C MCK1P21965 375 aaKnown RBP4.89□□□□□ -1.63
PEX12YMR026C VID24P38263 362 aa4.89□□□□□ -1.63
PEX12YMR026C KRE9P39005 276 aa4.89□□□□□ -1.63
PEX12YMR026C MET18P40469 1032 aa4.89□□□□□ -1.63
PEX12YMR026C YJL213WP40896 331 aa4.89□□□□□ -1.63
PEX12YMR026C SLG1P54867 378 aa4.89□□□□□ -1.63
PEX12YMR026C PDS5Q04264 1277 aa4.89□□□□□ -1.63
PEX12YMR026C TSR2Q06672 205 aaKnown RBP4.89□□□□□ -1.63
PEX12YMR026C ATG29Q12092 213 aa4.89□□□□□ -1.63
PEX12YMR026C CYB2P00175 591 aa4.88□□□□□ -1.63
PEX12YMR026C MES1P00958 751 aaKnown RBP4.88□□□□□ -1.63
PEX12YMR026C RPL20AP0CX23 172 aaKnown RBP4.88□□□□□ -1.63
PEX12YMR026C RPL20BP0CX24 172 aaPredicted RBP4.88□□□□□ -1.63
PEX12YMR026C UTP9P38882 575 aaKnown RBP4.88□□□□□ -1.63
PEX12YMR026C SHO1P40073 367 aa4.88□□□□□ -1.63
PEX12YMR026C JJJ1P53863 590 aa4.88□□□□□ -1.63
PEX12YMR026C KEL3Q08979 651 aaPredicted RBP4.88□□□□□ -1.63
PEX12YMR026C RAV1P47104 1357 aa4.88□□□□□ -1.63
PEX12YMR026C ATP11P32453 318 aa4.87□□□□□ -1.63
PEX12YMR026C SEC66P33754 206 aa4.87□□□□□ -1.63
PEX12YMR026C PMT1P33775 817 aa4.87□□□□□ -1.63
PEX12YMR026C CMC1P36064 111 aa4.87□□□□□ -1.63
PEX12YMR026C PMU1P36069 295 aa4.87□□□□□ -1.63
PEX12YMR026C KEL1P38853 1164 aaKnown RBP4.87□□□□□ -1.63
PEX12YMR026C RIM20Q12033 661 aa4.87□□□□□ -1.63
PEX12YMR026C RTP1Q12751 981 aa4.87□□□□□ -1.63
PEX12YMR026C MET17P06106 444 aa4.86□□□□□ -1.63
PEX12YMR026C ATR1P13090 542 aa4.86□□□□□ -1.63
PEX12YMR026C CKA1P15790 372 aa4.86□□□□□ -1.63
PEX12YMR026C GPI10P30777 616 aa4.86□□□□□ -1.63
PEX12YMR026C HAT2P39984 401 aa4.86□□□□□ -1.63
PEX12YMR026C ALG8P40351 577 aa4.86□□□□□ -1.63
PEX12YMR026C MRPL19P53875 158 aa4.86□□□□□ -1.63
PEX12YMR026C IMP4P53941 290 aaKnown RBP4.86□□□□□ -1.63
PEX12YMR026C RKM5Q12367 367 aa4.86□□□□□ -1.63
PEX12YMR026C GRX6Q12438 231 aa4.86□□□□□ -1.63
PEX12YMR026C HEM2P05373 342 aa4.85□□□□□ -1.63
PEX12YMR026C AGA1P32323 725 aa4.85□□□□□ -1.63
PEX12YMR026C JNM1P36224 373 aa4.85□□□□□ -1.63
PEX12YMR026C YMR147WP40218 223 aaKnown RBP4.85□□□□□ -1.63
PEX12YMR026C POP1P41812 875 aa4.85□□□□□ -1.63
PEX12YMR026C HXT14P42833 540 aa4.85□□□□□ -1.63
PEX12YMR026C TAP42Q04372 366 aa4.85□□□□□ -1.63
PEX12YMR026C ERP4Q12450 207 aa4.85□□□□□ -1.63
PEX12YMR026C BUB3P26449 341 aa4.84□□□□□ -1.63
PEX12YMR026C TUL1P36096 758 aa4.84□□□□□ -1.63
PEX12YMR026C YHR218WP38899 603 aa4.84□□□□□ -1.63
PEX12YMR026C SYG1P40528 902 aa4.84□□□□□ -1.63
PEX12YMR026C ELP2P42935 788 aa4.84□□□□□ -1.63
PEX12YMR026C GWT1P47026 490 aa4.84□□□□□ -1.63
PEX12YMR026C URB2P47108 1174 aa4.84□□□□□ -1.63
PEX12YMR026C YGL108CP53139 140 aa4.84□□□□□ -1.63
PEX12YMR026C SCW10Q04951 389 aa4.84□□□□□ -1.63
PEX12YMR026C RQC1Q05468 723 aaKnown RBP4.84□□□□□ -1.63
PEX12YMR026C ROX1P25042 368 aa4.83□□□□□ -1.64
PEX12YMR026C CPR3P25719 182 aa4.83□□□□□ -1.64
PEX12YMR026C FUN19P28003 413 aaPredicted RBP4.83□□□□□ -1.64
PEX12YMR026C SMF1P38925 575 aa4.83□□□□□ -1.64
PEX12YMR026C FAU1P40099 211 aa4.83□□□□□ -1.64
PEX12YMR026C OCA1P50946 238 aaPredicted RBP4.83□□□□□ -1.64
PEX12YMR026C CTF3Q12748 733 aa4.83□□□□□ -1.64
PEX12YMR026C YML133CQ03099 1374 aa4.82□□□□□ -1.64
PEX12YMR026C YLL067CQ07888 1374 aa4.82□□□□□ -1.64
PEX12YMR026C YLL066CQ99208 1374 aa4.82□□□□□ -1.64
PEX12YMR026C CDC31P06704 161 aaKnown RBP4.81□□□□□ -1.64
PEX12YMR026C PUT3P25502 979 aaPredicted RBP4.81□□□□□ -1.64
PEX12YMR026C RAD14P28519 371 aa4.81□□□□□ -1.64
PEX12YMR026C IDP2P41939 412 aa4.81□□□□□ -1.64
PEX12YMR026C YJL132WP47014 750 aa4.81□□□□□ -1.64
PEX12YMR026C TAF11Q04226 346 aa4.81□□□□□ -1.64
PEX12YMR026C YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
PEX12YMR026C RHO2P06781 192 aa4.8□□□□□ -1.64
PEX12YMR026C SPB1P25582 841 aaPredicted RBP4.8□□□□□ -1.64
PEX12YMR026C NFU1P32860 256 aa4.8□□□□□ -1.64
PEX12YMR026C FRE2P36033 711 aa4.8□□□□□ -1.64
PEX12YMR026C TIF5P38431 405 aaKnown RBP4.8□□□□□ -1.64
PEX12YMR026C RRD2Q12461 358 aa4.8□□□□□ -1.64
PEX12YMR026C LEU4P06208 619 aaKnown RBP4.79□□□□□ -1.64
PEX12YMR026C AFG1P32317 509 aa4.79□□□□□ -1.64
PEX12YMR026C RSM22P36056 628 aa4.79□□□□□ -1.64
PEX12YMR026C THI2P38141 450 aa4.79□□□□□ -1.64
PEX12YMR026C YGR149WP48236 432 aa4.79□□□□□ -1.64
PEX12YMR026C WSC2P53832 503 aa4.79□□□□□ -1.64
PEX12YMR026C BOR1P53838 576 aa4.79□□□□□ -1.64
PEX12YMR026C LPD1P09624 499 aaKnown RBP4.78□□□□□ -1.64
PEX12YMR026C RED1P14291 827 aa4.78□□□□□ -1.64
PEX12YMR026C ATP10P18496 279 aa4.78□□□□□ -1.64
PEX12YMR026C RNA14P25298 677 aaKnown RBP4.78□□□□□ -1.64
PEX12YMR026C CBP4P37267 147 aa4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms