RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C SIP2P34164 415 aaKnown RBP2.07□□□□□ -2.08
SGD1YLR336C RIM2P38127 377 aa2.07□□□□□ -2.08
SGD1YLR336C YDR131CQ03899 556 aa2.07□□□□□ -2.08
SGD1YLR336C YLR281CQ05863 155 aa2.07□□□□□ -2.08
SGD1YLR336C SYO1Q07395 620 aa2.07□□□□□ -2.08
SGD1YLR336C YEH2Q07950 538 aa2.07□□□□□ -2.08
SGD1YLR336C NRT1Q08485 598 aa2.07□□□□□ -2.08
SGD1YLR336C CFT2Q12102 859 aaPredicted RBP2.07□□□□□ -2.08
SGD1YLR336C GLK1P17709 500 aaKnown RBP2.06□□□□□ -2.08
SGD1YLR336C YIM1P28625 365 aa2.06□□□□□ -2.08
SGD1YLR336C THI2P38141 450 aa2.06□□□□□ -2.08
SGD1YLR336C BZZ1P38822 633 aa2.06□□□□□ -2.08
SGD1YLR336C SAD1P43589 448 aa2.06□□□□□ -2.08
SGD1YLR336C IVY1Q04934 453 aa2.06□□□□□ -2.08
SGD1YLR336C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
SGD1YLR336C NDD1Q08887 554 aa2.06□□□□□ -2.08
SGD1YLR336C SNT1P25357 1226 aa2.06□□□□□ -2.08
SGD1YLR336C AFG1P32317 509 aa2.06□□□□□ -2.08
SGD1YLR336C OTU2P38747 307 aaKnown RBP2.06□□□□□ -2.08
SGD1YLR336C YJL068CP40363 299 aa2.06□□□□□ -2.08
SGD1YLR336C IKS1P47042 667 aa2.06□□□□□ -2.08
SGD1YLR336C YGR149WP48236 432 aa2.06□□□□□ -2.08
SGD1YLR336C CUL3P53202 744 aa2.06□□□□□ -2.08
SGD1YLR336C SPC19Q03954 165 aa2.06□□□□□ -2.08
SGD1YLR336C KEL3Q08979 651 aaPredicted RBP2.06□□□□□ -2.08
SGD1YLR336C SFI1Q12369 946 aa2.06□□□□□ -2.08
SGD1YLR336C CLB3P24870 427 aa2.05□□□□□ -2.08
SGD1YLR336C YCR007CP25354 239 aa2.05□□□□□ -2.08
SGD1YLR336C FUN19P28003 413 aaPredicted RBP2.05□□□□□ -2.08
SGD1YLR336C IDH2P28241 369 aaKnown RBP2.05□□□□□ -2.08
SGD1YLR336C MFT1P33441 392 aaKnown RBP2.05□□□□□ -2.08
SGD1YLR336C TUL1P36096 758 aa2.05□□□□□ -2.08
SGD1YLR336C DLD2P46681 530 aaKnown RBP2.05□□□□□ -2.08
SGD1YLR336C OCA1P50946 238 aaPredicted RBP2.05□□□□□ -2.08
SGD1YLR336C BNI5P53890 448 aaKnown RBP2.05□□□□□ -2.08
SGD1YLR336C RPM2Q02773 1202 aa2.05□□□□□ -2.08
SGD1YLR336C SIL1Q08199 421 aa2.05□□□□□ -2.08
SGD1YLR336C ATP10P18496 279 aa2.05□□□□□ -2.08
SGD1YLR336C ADK2P26364 225 aa2.05□□□□□ -2.08
SGD1YLR336C RML2P32611 393 aa2.05□□□□□ -2.08
SGD1YLR336C YTA12P40341 825 aa2.05□□□□□ -2.08
SGD1YLR336C POP1P41812 875 aa2.05□□□□□ -2.08
SGD1YLR336C DIM1P41819 318 aaKnown RBP2.05□□□□□ -2.08
SGD1YLR336C GPI1P53306 609 aa2.05□□□□□ -2.08
SGD1YLR336C DAP1Q12091 152 aa2.05□□□□□ -2.08
SGD1YLR336C YRF1-4O13559 1382 aa2.05□□□□□ -2.08
SGD1YLR336C PDX1P16451 410 aa2.04□□□□□ -2.08
SGD1YLR336C BUB3P26449 341 aa2.04□□□□□ -2.08
SGD1YLR336C RAD14P28519 371 aa2.04□□□□□ -2.08
SGD1YLR336C GCS1P35197 352 aa2.04□□□□□ -2.08
SGD1YLR336C STB6P36085 766 aa2.04□□□□□ -2.08
SGD1YLR336C ROY1Q04847 553 aa2.04□□□□□ -2.08
SGD1YLR336C MRPL51Q06090 140 aaPredicted RBP2.04□□□□□ -2.08
SGD1YLR336C YLR345WQ06137 509 aa2.04□□□□□ -2.08
SGD1YLR336C VTA1Q06263 330 aa2.04□□□□□ -2.08
SGD1YLR336C YDL009CQ12210 107 aa2.04□□□□□ -2.08
SGD1YLR336C YCR051WP25631 222 aa2.04□□□□□ -2.08
SGD1YLR336C LOS1P33418 1100 aaPredicted RBP2.04□□□□□ -2.08
SGD1YLR336C RRP3P38712 501 aaKnown RBP2.04□□□□□ -2.08
SGD1YLR336C YJL070CP40361 888 aa2.04□□□□□ -2.08
SGD1YLR336C YGL082WP53155 381 aa2.04□□□□□ -2.08
SGD1YLR336C MNP1P53163 194 aaPredicted RBP2.04□□□□□ -2.08
SGD1YLR336C GIR2Q03768 265 aaPredicted RBP2.04□□□□□ -2.08
SGD1YLR336C HCR1Q05775 265 aaKnown RBP2.04□□□□□ -2.08
SGD1YLR336C YNK1P36010 153 aaKnown RBP2.04□□□□□ -2.08
SGD1YLR336C CCT2P39076 527 aaKnown RBP2.04□□□□□ -2.08
SGD1YLR336C FAU1P40099 211 aa2.04□□□□□ -2.08
SGD1YLR336C RPR2P40571 144 aa2.04□□□□□ -2.08
SGD1YLR336C ERB1Q04660 807 aaKnown RBP2.04□□□□□ -2.08
SGD1YLR336C GRS2Q06817 618 aa2.04□□□□□ -2.08
SGD1YLR336C BRR1Q99177 341 aaPredicted RBP2.04□□□□□ -2.08
SGD1YLR336C RPL15AP05748 204 aaKnown RBP2.03□□□□□ -2.08
SGD1YLR336C RHO2P06781 192 aa2.03□□□□□ -2.08
SGD1YLR336C URA7P28274 579 aaKnown RBP2.03□□□□□ -2.08
SGD1YLR336C NDC1P32500 655 aa2.03□□□□□ -2.08
SGD1YLR336C NIP100P33420 868 aa2.03□□□□□ -2.08
SGD1YLR336C HCS1P34243 683 aa2.03□□□□□ -2.08
SGD1YLR336C MTC4P38335 694 aaKnown RBP2.03□□□□□ -2.08
SGD1YLR336C SSU1P41930 458 aa2.03□□□□□ -2.08
SGD1YLR336C RTT101P47050 842 aa2.03□□□□□ -2.08
SGD1YLR336C IRC15Q02733 499 aa2.03□□□□□ -2.08
SGD1YLR336C SOV1Q04748 898 aa2.03□□□□□ -2.08
SGD1YLR336C CAR1P00812 333 aaKnown RBP2.03□□□□□ -2.09
SGD1YLR336C RIP1P08067 215 aa2.03□□□□□ -2.09
SGD1YLR336C SPS4P09937 338 aa2.03□□□□□ -2.09
SGD1YLR336C ERV1P27882 189 aa2.03□□□□□ -2.09
SGD1YLR336C PRP21P32524 280 aaPredicted RBP2.03□□□□□ -2.09
SGD1YLR336C YME2P32843 850 aa2.03□□□□□ -2.09
SGD1YLR336C PTR2P32901 601 aa2.03□□□□□ -2.09
SGD1YLR336C HAT2P39984 401 aa2.03□□□□□ -2.09
SGD1YLR336C ARK1P53974 638 aa2.03□□□□□ -2.09
SGD1YLR336C YMR317WQ04893 1140 aa2.03□□□□□ -2.09
SGD1YLR336C AYT1Q12226 474 aa2.03□□□□□ -2.09
SGD1YLR336C LSP1Q12230 341 aaKnown RBP2.03□□□□□ -2.09
SGD1YLR336C ERP4Q12450 207 aa2.03□□□□□ -2.09
SGD1YLR336C AFI1Q99222 893 aa2.03□□□□□ -2.09
SGD1YLR336C SEC63P14906 663 aa2.02□□□□□ -2.09
SGD1YLR336C DHH1P39517 506 aaKnown RBP2.02□□□□□ -2.09
SGD1YLR336C GCD10P41814 478 aa2.02□□□□□ -2.09
SGD1YLR336C TFG2P41896 400 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms