RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W SYO1Q07395 620 aa2.24□□□□□ -2.05
SEC22YLR268W RPS10AQ08745 105 aaPredicted RBP2.24□□□□□ -2.05
SEC22YLR268W YPT6Q99260 215 aa2.24□□□□□ -2.05
SEC22YLR268W HHF1P02309 103 aaKnown RBP2.23□□□□□ -2.05
SEC22YLR268W CPR1P14832 162 aaKnown RBP2.23□□□□□ -2.05
SEC22YLR268W EST1P17214 699 aaPredicted RBP2.23□□□□□ -2.05
SEC22YLR268W YBR144CP34215 104 aa2.23□□□□□ -2.05
SEC22YLR268W SEF1P34228 1148 aa2.23□□□□□ -2.05
SEC22YLR268W RPL32P38061 130 aaKnown RBP2.23□□□□□ -2.05
SEC22YLR268W CIN4P39110 191 aa2.23□□□□□ -2.05
SEC22YLR268W NDE1P40215 560 aa2.23□□□□□ -2.05
SEC22YLR268W ALG5P40350 334 aa2.23□□□□□ -2.05
SEC22YLR268W YFL067WP43537 175 aa2.23□□□□□ -2.05
SEC22YLR268W SNG1P46950 547 aa2.23□□□□□ -2.05
SEC22YLR268W IMD4P50094 524 aaKnown RBP2.23□□□□□ -2.05
SEC22YLR268W ARE2P53629 642 aaKnown RBP2.23□□□□□ -2.05
SEC22YLR268W IPI3P53877 555 aa2.23□□□□□ -2.05
SEC22YLR268W IRC15Q02733 499 aa2.23□□□□□ -2.05
SEC22YLR268W RTP1Q12751 981 aa2.23□□□□□ -2.05
SEC22YLR268W YJR112W-AQ3E743 109 aa2.23□□□□□ -2.05
SEC22YLR268W DFR1P07807 211 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
SEC22YLR268W ART10P18634 518 aaKnown RBP2.22□□□□□ -2.05
SEC22YLR268W PUT3P25502 979 aaPredicted RBP2.22□□□□□ -2.05
SEC22YLR268W MTR2P34232 184 aaKnown RBP2.22□□□□□ -2.05
SEC22YLR268W TCD2P36101 447 aaKnown RBP2.22□□□□□ -2.05
SEC22YLR268W ESL1P40456 1118 aa2.22□□□□□ -2.05
SEC22YLR268W ARF3P40994 183 aaRIP-Chip data2.22□□□□□ -2.05not detected
SEC22YLR268W YGR126WP53274 230 aa2.22□□□□□ -2.05
SEC22YLR268W MDM1Q01846 1127 aa2.22□□□□□ -2.05
SEC22YLR268W RPT6Q01939 405 aaKnown RBP2.22□□□□□ -2.05
SEC22YLR268W FIN1Q03898 291 aa2.22□□□□□ -2.05
SEC22YLR268W RRG7Q08774 242 aaPredicted RBP2.22□□□□□ -2.05
SEC22YLR268W LSP1Q12230 341 aaKnown RBP2.22□□□□□ -2.05
SEC22YLR268W ERV2Q12284 196 aa2.22□□□□□ -2.05
SEC22YLR268W HRT3Q12347 344 aa2.22□□□□□ -2.05
SEC22YLR268W FOB1O13329 566 aa2.21□□□□□ -2.06
SEC22YLR268W INH1P01097 85 aa2.21□□□□□ -2.06
SEC22YLR268W MRP13P12686 339 aa2.21□□□□□ -2.06
SEC22YLR268W AMD1P15274 810 aaKnown RBP2.21□□□□□ -2.06
SEC22YLR268W WBP1P33767 430 aaKnown RBP2.21□□□□□ -2.06
SEC22YLR268W UTP9P38882 575 aaKnown RBP2.21□□□□□ -2.06
SEC22YLR268W DOT5P40553 215 aa2.21□□□□□ -2.06
SEC22YLR268W SGN1P40561 250 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
SEC22YLR268W MET28P40573 187 aa2.21□□□□□ -2.06
SEC22YLR268W IRC6P43615 237 aa2.21□□□□□ -2.06
SEC22YLR268W MSC1Q03104 513 aa2.21□□□□□ -2.06
SEC22YLR268W IVY1Q04934 453 aa2.21□□□□□ -2.06
SEC22YLR268W VPS38Q05919 439 aa2.21□□□□□ -2.06
SEC22YLR268W AVL9Q12500 764 aa2.21□□□□□ -2.06
SEC22YLR268W GAL80P04387 435 aa2.2□□□□□ -2.06
SEC22YLR268W ARG3P05150 338 aa2.2□□□□□ -2.06
SEC22YLR268W RNA14P25298 677 aaKnown RBP2.2□□□□□ -2.06
SEC22YLR268W PAP1P29468 568 aaKnown RBP2.2□□□□□ -2.06
SEC22YLR268W FRE1P32791 686 aa2.2□□□□□ -2.06
SEC22YLR268W MRP4P32902 394 aa2.2□□□□□ -2.06
SEC22YLR268W JNM1P36224 373 aa2.2□□□□□ -2.06
SEC22YLR268W YEL057CP39983 233 aa2.2□□□□□ -2.06
SEC22YLR268W SPO22P40511 975 aa2.2□□□□□ -2.06
SEC22YLR268W ALK1P43633 760 aaKnown RBP2.2□□□□□ -2.06
SEC22YLR268W SCD6P45978 349 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
SEC22YLR268W SRB7P47822 140 aa2.2□□□□□ -2.06
SEC22YLR268W TOF2Q02208 771 aa2.2□□□□□ -2.06
SEC22YLR268W PBA1Q05778 276 aa2.2□□□□□ -2.06
SEC22YLR268W COQ9Q05779 260 aa2.2□□□□□ -2.06
SEC22YLR268W YDL057WQ07379 328 aa2.2□□□□□ -2.06
SEC22YLR268W TMS1Q12116 473 aa2.2□□□□□ -2.06
SEC22YLR268W RLM1Q12224 676 aa2.2□□□□□ -2.06
SEC22YLR268W HSH49Q99181 213 aaPredicted RBP2.2□□□□□ -2.06
SEC22YLR268W CDC31P06704 161 aaKnown RBP2.19□□□□□ -2.06
SEC22YLR268W PRD1P25375 712 aa2.19□□□□□ -2.06
SEC22YLR268W YCR022CP25620 114 aa2.19□□□□□ -2.06
SEC22YLR268W ARO2P28777 376 aaKnown RBP2.19□□□□□ -2.06
SEC22YLR268W CST26P38226 397 aa2.19□□□□□ -2.06
SEC22YLR268W MSR1P38714 643 aa2.19□□□□□ -2.06
SEC22YLR268W YHR210CP38893 341 aa2.19□□□□□ -2.06
SEC22YLR268W PET130P47065 347 aa2.19□□□□□ -2.06
SEC22YLR268W YJR154WP47181 346 aa2.19□□□□□ -2.06
SEC22YLR268W MRPL19P53875 158 aa2.19□□□□□ -2.06
SEC22YLR268W ARK1P53974 638 aa2.19□□□□□ -2.06
SEC22YLR268W ELP3Q02908 557 aaKnown RBP2.19□□□□□ -2.06
SEC22YLR268W RNY1Q02933 434 aaKnown RBP2.19□□□□□ -2.06
SEC22YLR268W BNA5Q05979 453 aa2.19□□□□□ -2.06
SEC22YLR268W CTF3Q12748 733 aa2.19□□□□□ -2.06
SEC22YLR268W PEP4P07267 405 aaKnown RBP2.18□□□□□ -2.06
SEC22YLR268W RED1P14291 827 aa2.18□□□□□ -2.06
SEC22YLR268W CKA1P15790 372 aa2.18□□□□□ -2.06
SEC22YLR268W YCR007CP25354 239 aa2.18□□□□□ -2.06
SEC22YLR268W SWD3P38123 315 aa2.18□□□□□ -2.06
SEC22YLR268W MUM2P38236 366 aa2.18□□□□□ -2.06
SEC22YLR268W VID24P38263 362 aa2.18□□□□□ -2.06
SEC22YLR268W AIM22P47051 409 aa2.18□□□□□ -2.06
SEC22YLR268W BUD32P53323 261 aa2.18□□□□□ -2.06
SEC22YLR268W CAF40P53829 373 aa2.18□□□□□ -2.06
SEC22YLR268W SLD5Q03406 294 aa2.18□□□□□ -2.06
SEC22YLR268W YDR239CQ03780 787 aa2.18□□□□□ -2.06
SEC22YLR268W TAF11Q04226 346 aa2.18□□□□□ -2.06
SEC22YLR268W RPC11Q04307 110 aaPredicted RBP2.18□□□□□ -2.06
SEC22YLR268W MRD1Q06106 887 aaKnown RBP2.18□□□□□ -2.06
SEC22YLR268W THP1Q08231 455 aa2.18□□□□□ -2.06
SEC22YLR268W YOR365CQ08844 703 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms