RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	YNR068C	P53754	272 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	NIS1	P53939	407 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	RCF1	Q03713	159 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	MTQ2	Q03920	221 aa	Predicted RBP	3.77	□□□□□ -1.81
LOS1	YKL205W	YPS7	Q06325	596 aa		3.77	□□□□□ -1.81
LOS1	YKL205W	RIB2	Q12362	591 aa	Known RBP	3.77	□□□□□ -1.81
LOS1	YKL205W	TOM1	Q03280	3268 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	GAL4	P04386	881 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	HOM3	P10869	527 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	KSS1	P14681	368 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	GFD2	P25370	566 aa	Known RBP	3.76	□□□□□ -1.81
LOS1	YKL205W	STP22	P25604	385 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	SRX1	P36077	127 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	RIM11	P38615	370 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	FAA3	P39002	694 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	PRM2	P40534	656 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	PTR3	P43606	678 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	EFM5	P53200	248 aa	Known RBP	3.76	□□□□□ -1.81
LOS1	YKL205W	BIO5	P53744	561 aa	Known RBP	3.76	□□□□□ -1.81
LOS1	YKL205W	YNL010W	P53981	241 aa	Known RBP	3.76	□□□□□ -1.81
LOS1	YKL205W	EFR3	Q03653	782 aa	Known RBP	3.76	□□□□□ -1.81
LOS1	YKL205W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	not detected
LOS1	YKL205W	OPI10	Q08202	246 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	YPL119C-A	Q3E751	87 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	HTA1	P04911	132 aa	Known RBP	3.76	□□□□□ -1.81
LOS1	YKL205W	CYT1	P07143	309 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	SPS1	P08458	490 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	HSF1	P10961	833 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	HAP4	P14064	554 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	HXT4	P32467	576 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	TOA1	P32773	286 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	SNU114	P36048	1008 aa	Known RBP	3.76	□□□□□ -1.81
LOS1	YKL205W	FLO10	P36170	1169 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	YRO2	P38079	344 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	HXT6	P39003	570 aa	Known RBP	3.76	□□□□□ -1.81
LOS1	YKL205W	HXT7	P39004	570 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	YEL068C	P39977	110 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	YJR154W	P47181	346 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	LDB17	Q12342	491 aa		3.76	□□□□□ -1.81
LOS1	YKL205W	RPS21A	P0C0V8	87 aa	Known RBP	3.75	□□□□□ -1.81
LOS1	YKL205W	POL30	P15873	258 aa	Known RBP	3.75	□□□□□ -1.81
LOS1	YKL205W	CLB4	P24871	460 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	MGM101	P32787	269 aa	Known RBP	3.75	□□□□□ -1.81
LOS1	YKL205W	PRP39	P39682	629 aa	Known RBP	3.75	□□□□□ -1.81
LOS1	YKL205W	VRG4	P40107	337 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	GCV1	P48015	400 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	EGD1	Q02642	157 aa	Known RBP	3.75	□□□□□ -1.81
LOS1	YKL205W	ATP25	Q03153	612 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	YDR338C	Q05497	695 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	RTT10	Q08924	1013 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	RIB3	Q99258	208 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	FAR1	P21268	830 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	SEC14	P24280	304 aa	Known RBP	3.75	□□□□□ -1.81
LOS1	YKL205W	RBK1	P25332	333 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	NPP1	P25353	742 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	HEM3	P28789	327 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	PRP18	P33411	251 aa	Predicted RBP	3.75	□□□□□ -1.81
LOS1	YKL205W	HXT5	P38695	592 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	YHR218W	P38899	603 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	SEC31	P38968	1273 aa	Known RBP	3.75	□□□□□ -1.81
LOS1	YKL205W	UME6	P39001	836 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	FAA2	P39518	744 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	ILM1	P47155	203 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	COS12	P53053	380 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	USE1	P53146	245 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	COG5	P53951	403 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	PRO2	P54885	456 aa	Known RBP	3.75	□□□□□ -1.81
LOS1	YKL205W	SPC19	Q03954	165 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	ARO10	Q06408	635 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	PFA4	Q12006	378 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	YPR022C	Q12139	1133 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	UPC2	Q12151	913 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	MOD5	P07884	428 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	SYP1	P25623	870 aa	Known RBP	3.75	□□□□□ -1.81
LOS1	YKL205W	BEM1	P29366	551 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	CAT2	P32796	670 aa	Known RBP	3.75	□□□□□ -1.81
LOS1	YKL205W	ARA1	P38115	344 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	YHL012W	P38709	493 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	YJL206C	P39529	758 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	ELO1	P39540	310 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	YRB1	P41920	201 aa	Known RBP	3.75	□□□□□ -1.81
LOS1	YKL205W	PFA3	P42836	336 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	COG7	P53195	279 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	ATF2	P53296	535 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	CWC24	P53769	259 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	YNL095C	P53932	642 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	GTR1	Q00582	310 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	RPC11	Q04307	110 aa	Predicted RBP	3.75	□□□□□ -1.81
LOS1	YKL205W	SMA2	Q04658	369 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	UBX3	Q12229	455 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	PAR32	Q12515	295 aa	Known RBP	3.75	□□□□□ -1.81
LOS1	YKL205W	SET6	Q12529	373 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	YOL159C-A	Q3E769	90 aa		3.75	□□□□□ -1.81
LOS1	YKL205W	RPP2B	P02400	110 aa	Known RBP	3.74	□□□□□ -1.81
LOS1	YKL205W	SIN4	P32259	974 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	TAF14	P35189	244 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	NUP120	P35729	1037 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	DSF2	P38213	736 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	MUM2	P38236	366 aa		3.74	□□□□□ -1.81
LOS1	YKL205W	YJL068C	P40363	299 aa		3.74	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms