RNA–Protein interactions for RNA: YKL116C

PRR1, Transcript of Serine/threonine protein kinase, yeast

Gene PRR1, Length 1,557 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRR1	YKL116C	YCL012C	Q8J0M4	134 aa		4.92	□□□□□ -1.62
PRR1	YKL116C	YOR338W	Q99326	363 aa		4.92	□□□□□ -1.62
PRR1	YKL116C	VCX1	Q99385	411 aa		4.92	□□□□□ -1.62
PRR1	YKL116C	FUM1	P08417	488 aa	Known RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	KAR1	P11927	433 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	CBS2	P14905	389 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	UBA1	P22515	1024 aa	Known RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	CLB3	P24870	427 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	NTG1	P31378	399 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	AAR2	P32357	355 aa	Predicted RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	ARP2	P32381	391 aa	Known RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	ATP11	P32453	318 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	SPS19	P32573	292 aa	Known RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	SEC17	P32602	292 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	ATO2	P32907	282 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	EMC3	P36039	253 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	YBR138C	P38277	524 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	RPH1	P39956	796 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	ARF3	P40994	183 aa	RIP-Chip data	4.91	□□□□□ -1.62	RIP-Chip
PRR1	YKL116C	ERG10	P41338	398 aa	Known RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	GCN20	P43535	752 aa	Known RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	DSL1	P53847	754 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	IDP3	P53982	420 aa	Known RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	EFR3	Q03653	782 aa	Known RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	YDR239C	Q03780	787 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	SPO71	Q03868	1245 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	BSC2	Q05611	235 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	MHT1	Q12525	324 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	CBP2	P03874	630 aa	Predicted RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	LEU4	P06208	619 aa	Known RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	STE3	P06783	470 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	MET8	P15807	274 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	APA1	P16550	321 aa	Known RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	DPB2	P24482	689 aa	Predicted RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	RSC6	P25632	483 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	TFB1	P32776	642 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	STE5	P32917	917 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	PXA2	P34230	853 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	YKL100C	P34248	587 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	WHI3	P34761	661 aa	Known RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	RIB1	P38066	345 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	BMT2	P38278	337 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	UBA4	P38820	440 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	PEX28	P38848	579 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	ATG7	P38862	630 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	SSN3	P39073	555 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	YER034W	P40022	185 aa	Known RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	AVT6	P40074	448 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	RIC1	P40395	1056 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	GAB1	P41733	394 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	YNR068C	P53754	272 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	GIP3	Q03016	1276 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	NSE5	Q03718	556 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	RPC11	Q04307	110 aa	Predicted RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
PRR1	YKL116C	TGL5	Q12043	749 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	YOR012W	Q12351	137 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	WTM1	Q12363	437 aa	Known RBP	4.91	□□□□□ -1.62
PRR1	YKL116C	GTT2	Q12390	233 aa		4.91	□□□□□ -1.62
PRR1	YKL116C	UNG1	P12887	359 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	PRI2	P20457	528 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	FAR1	P21268	830 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	SGV1	P23293	657 aa	Known RBP	4.9	□□□□□ -1.63
PRR1	YKL116C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
PRR1	YKL116C	APE2	P32454	952 aa	Known RBP	4.9	□□□□□ -1.63
PRR1	YKL116C	YCR087C-A	P37263	153 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	LRP1	P38801	184 aa	Known RBP	4.9	□□□□□ -1.63
PRR1	YKL116C	RBG1	P39729	369 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	YEL073C	P39974	107 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	YEL020C	P39994	560 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	THO1	P40040	218 aa	Known RBP	4.9	□□□□□ -1.63
PRR1	YKL116C	DOT6	P40059	670 aa	Known RBP	4.9	□□□□□ -1.63
PRR1	YKL116C	LSM5	P40089	93 aa	Known RBP	4.9	□□□□□ -1.63
PRR1	YKL116C	LAS21	P40367	830 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	PMT4	P46971	762 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	MON1	P53129	644 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	SWC4	P53201	476 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	MCM21	Q06675	368 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	SWA2	Q06677	668 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	YOL131W	Q08270	108 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	YPR011C	Q12251	326 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	RRP42	Q12277	265 aa	Predicted RBP	4.9	□□□□□ -1.63
PRR1	YKL116C	YOL159C-A	Q3E769	90 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	SRN2	Q99176	213 aa		4.9	□□□□□ -1.63
PRR1	YKL116C	CLN2	P20438	545 aa		4.89	□□□□□ -1.63
PRR1	YKL116C	KIN3	P22209	435 aa		4.89	□□□□□ -1.63
PRR1	YKL116C	RFA2	P26754	273 aa	Known RBP	4.89	□□□□□ -1.63
PRR1	YKL116C	YJU3	P28321	313 aa		4.89	□□□□□ -1.63
PRR1	YKL116C	HXT4	P32467	576 aa		4.89	□□□□□ -1.63
PRR1	YKL116C	SSE2	P32590	693 aa	Known RBP	4.89	□□□□□ -1.63
PRR1	YKL116C	PMT1	P33775	817 aa		4.89	□□□□□ -1.63
PRR1	YKL116C	SPT23	P35210	1082 aa		4.89	□□□□□ -1.63
PRR1	YKL116C	LHS1	P36016	881 aa		4.89	□□□□□ -1.63
PRR1	YKL116C	YPT52	P36018	234 aa	Known RBP	4.89	□□□□□ -1.63
PRR1	YKL116C	GLG1	P36143	616 aa		4.89	□□□□□ -1.63
PRR1	YKL116C	AHP1	P38013	176 aa	Known RBP	4.89	□□□□□ -1.63
PRR1	YKL116C	ECM8	P38246	354 aa		4.89	□□□□□ -1.63
PRR1	YKL116C	AMN1	P38285	549 aa	Predicted RBP	4.89	□□□□□ -1.63
PRR1	YKL116C	YHL012W	P38709	493 aa		4.89	□□□□□ -1.63
PRR1	YKL116C	GOS1	P38736	223 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 103.9 ms