RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeastyeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT23YKL020C YNL181WP53878 407 aa3.87□□□□□ -1.79
SPT23YKL020C UTP6Q02354 440 aaKnown RBP3.87□□□□□ -1.79
SPT23YKL020C RNY1Q02933 434 aaKnown RBP3.87□□□□□ -1.79
SPT23YKL020C YDR541CQ03049 344 aa3.87□□□□□ -1.79
SPT23YKL020C ECM18Q04623 453 aa3.87□□□□□ -1.79
SPT23YKL020C PAL1Q05518 499 aaKnown RBP3.87□□□□□ -1.79
SPT23YKL020C TFC6Q06339 672 aa3.87□□□□□ -1.79
SPT23YKL020C ASA1Q06822 443 aa3.87□□□□□ -1.79
SPT23YKL020C THI13Q07748 340 aa3.87□□□□□ -1.79
SPT23YKL020C RFU1Q08003 200 aa3.87□□□□□ -1.79
SPT23YKL020C PAR32Q12515 295 aaKnown RBP3.87□□□□□ -1.79
SPT23YKL020C UNG1P12887 359 aa3.86□□□□□ -1.79
SPT23YKL020C ABF1P14164 731 aa3.86□□□□□ -1.79
SPT23YKL020C SGV1P23293 657 aaKnown RBP3.86□□□□□ -1.79
SPT23YKL020C SNT1P25357 1226 aa3.86□□□□□ -1.79
SPT23YKL020C ATP11P32453 318 aa3.86□□□□□ -1.79
SPT23YKL020C MSS1P32559 526 aaPredicted RBP3.86□□□□□ -1.79
SPT23YKL020C TIM23P32897 222 aa3.86□□□□□ -1.79
SPT23YKL020C MAL32P38158 584 aa3.86□□□□□ -1.79
SPT23YKL020C NTC20P38302 140 aaPredicted RBP3.86□□□□□ -1.79
SPT23YKL020C SPC97P38863 823 aa3.86□□□□□ -1.79
SPT23YKL020C HRB1P38922 454 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SPT23YKL020C ERV46P39727 415 aa3.86□□□□□ -1.79
SPT23YKL020C MSS2P40990 351 aa3.86□□□□□ -1.79
SPT23YKL020C AMA1P50082 593 aa3.86□□□□□ -1.79
SPT23YKL020C MAL12P53341 584 aa3.86□□□□□ -1.79
SPT23YKL020C MRPL19P53875 158 aa3.86□□□□□ -1.79
SPT23YKL020C SMA1Q02651 245 aa3.86□□□□□ -1.79
SPT23YKL020C YDR248CQ03786 193 aa3.86□□□□□ -1.79
SPT23YKL020C VBA4Q04602 768 aaKnown RBP3.86□□□□□ -1.79
SPT23YKL020C CIA1Q05583 330 aa3.86□□□□□ -1.79
SPT23YKL020C MCH5Q08777 521 aa3.86□□□□□ -1.79
SPT23YKL020C FEX1Q08913 375 aa3.86□□□□□ -1.79
SPT23YKL020C ACM1Q08981 209 aa3.86□□□□□ -1.79
SPT23YKL020C YOR342CQ12182 319 aa3.86□□□□□ -1.79
SPT23YKL020C PFK27Q12471 397 aaPredicted RBP3.86□□□□□ -1.79
SPT23YKL020C HXK2P04807 486 aaKnown RBP3.86□□□□□ -1.79
SPT23YKL020C GRX2P17695 143 aaKnown RBP3.86□□□□□ -1.79
SPT23YKL020C HOP1P20050 605 aa3.86□□□□□ -1.79
SPT23YKL020C SAN1P22470 610 aa3.86□□□□□ -1.79
SPT23YKL020C PTC6P25646 442 aa3.86□□□□□ -1.79
SPT23YKL020C RAD14P28519 371 aa3.86□□□□□ -1.79
SPT23YKL020C HRR25P29295 494 aaKnown RBP3.86□□□□□ -1.79
SPT23YKL020C MCM5P29496 775 aaKnown RBP3.86□□□□□ -1.79
SPT23YKL020C GCD11P32481 527 aaKnown RBP3.86□□□□□ -1.79
SPT23YKL020C SSE2P32590 693 aaKnown RBP3.86□□□□□ -1.79
SPT23YKL020C SEF1P34228 1148 aa3.86□□□□□ -1.79
SPT23YKL020C PCA1P38360 1216 aa3.86□□□□□ -1.79
SPT23YKL020C PEX28P38848 579 aa3.86□□□□□ -1.79
SPT23YKL020C EGD2P38879 174 aaKnown RBP3.86□□□□□ -1.79
SPT23YKL020C YHR202WP38887 602 aa3.86□□□□□ -1.79
SPT23YKL020C FHL1P39521 936 aa3.86□□□□□ -1.79
SPT23YKL020C UBP7P40453 1071 aa3.86□□□□□ -1.79
SPT23YKL020C YJR111CP47148 283 aaKnown RBP3.86□□□□□ -1.79
SPT23YKL020C CUL3P53202 744 aa3.86□□□□□ -1.79
SPT23YKL020C VPS62P53285 467 aa3.86□□□□□ -1.79
SPT23YKL020C OST6Q03723 332 aa3.86□□□□□ -1.79
SPT23YKL020C ENT5Q03769 411 aaKnown RBP3.86□□□□□ -1.79
SPT23YKL020C NGL1Q08213 363 aaKnown RBP3.86□□□□□ -1.79
SPT23YKL020C FLC1Q08967 793 aa3.86□□□□□ -1.79
SPT23YKL020C Q0144Q9ZZW2 109 aa3.86□□□□□ -1.79
SPT23YKL020C TPK2P06245 380 aa3.85□□□□□ -1.79
SPT23YKL020C RAD7P06779 565 aa3.85□□□□□ -1.79
SPT23YKL020C RAD10P06838 210 aa3.85□□□□□ -1.79
SPT23YKL020C CYT1P07143 309 aa3.85□□□□□ -1.79
SPT23YKL020C ADE5,7P07244 802 aaKnown RBP3.85□□□□□ -1.79
SPT23YKL020C HPR1P17629 752 aaKnown RBP3.85□□□□□ -1.79
SPT23YKL020C SLY1P22213 666 aa3.85□□□□□ -1.79
SPT23YKL020C LIP5P32875 414 aa3.85□□□□□ -1.79
SPT23YKL020C ERG7P38604 731 aa3.85□□□□□ -1.79
SPT23YKL020C DSE1P40077 573 aa3.85□□□□□ -1.79
SPT23YKL020C CWC23P52868 283 aaPredicted RBP3.85□□□□□ -1.79
SPT23YKL020C SCY1P53009 804 aa3.85□□□□□ -1.79
SPT23YKL020C IMO32P53219 342 aa3.85□□□□□ -1.79
SPT23YKL020C TNA1P53322 534 aa3.85□□□□□ -1.79
SPT23YKL020C MTQ1P53944 314 aa3.85□□□□□ -1.79
SPT23YKL020C YNL034WP53963 612 aa3.85□□□□□ -1.79
SPT23YKL020C YNL018CP53976 612 aa3.85□□□□□ -1.79
SPT23YKL020C PEX13P80667 386 aa3.85□□□□□ -1.79
SPT23YKL020C YMR265CQ03508 461 aaKnown RBP3.85□□□□□ -1.79
SPT23YKL020C GTO3Q04806 366 aa3.85□□□□□ -1.79
SPT23YKL020C BUR2Q05949 395 aa3.85□□□□□ -1.79
SPT23YKL020C YPR127WQ06494 345 aa3.85□□□□□ -1.79
SPT23YKL020C COS7Q07788 383 aa3.85□□□□□ -1.79
SPT23YKL020C FRE3Q08905 711 aa3.85□□□□□ -1.79
SPT23YKL020C THI21Q08975 551 aa3.85□□□□□ -1.79
SPT23YKL020C RTK1Q12100 620 aaPredicted RBP3.85□□□□□ -1.79
SPT23YKL020C FYV7Q12247 151 aa3.85□□□□□ -1.79
SPT23YKL020C YDR061WQ12298 539 aa3.85□□□□□ -1.79
SPT23YKL020C ATP14Q12349 124 aa3.85□□□□□ -1.79
SPT23YKL020C NUC1P08466 329 aa3.85□□□□□ -1.79
SPT23YKL020C PET54P10834 293 aa3.85□□□□□ -1.79
SPT23YKL020C AAC3P18238 307 aa3.85□□□□□ -1.79
SPT23YKL020C DBR1P24309 405 aaKnown RBP3.85□□□□□ -1.79
SPT23YKL020C ATP7P30902 174 aa3.85□□□□□ -1.79
SPT23YKL020C THI4P32318 326 aa3.85□□□□□ -1.79
SPT23YKL020C YBR137WP38276 179 aa3.85□□□□□ -1.79
SPT23YKL020C UBX7P38349 436 aa3.85□□□□□ -1.79
SPT23YKL020C GDI1P39958 451 aaKnown RBP3.85□□□□□ -1.79
SPT23YKL020C YJL016WP47072 561 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms