RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W HIR2P32480 875 aa5.55□□□□□ -1.52
PRP40YKL012W MSN2P33748 704 aa5.55□□□□□ -1.52
PRP40YKL012W RMD9P53140 646 aaKnown RBP5.55□□□□□ -1.52
PRP40YKL012W ORM2Q06144 216 aa5.55□□□□□ -1.52
PRP40YKL012W HSP42Q12329 375 aa5.55□□□□□ -1.52
PRP40YKL012W HSL1P34244 1518 aa5.55□□□□□ -1.52
PRP40YKL012W EDE1P34216 1381 aa5.55□□□□□ -1.52
PRP40YKL012W VMA2P16140 517 aaKnown RBP5.55□□□□□ -1.52
PRP40YKL012W MBR1P23493 339 aa5.55□□□□□ -1.52
PRP40YKL012W GEX1P25596 615 aa5.55□□□□□ -1.52
PRP40YKL012W MCM4P30665 933 aaKnown RBP5.55□□□□□ -1.52
PRP40YKL012W SNC1P31109 117 aa5.55□□□□□ -1.52
PRP40YKL012W DAD2P36162 133 aa5.55□□□□□ -1.52
PRP40YKL012W TOM22P49334 152 aa5.55□□□□□ -1.52
PRP40YKL012W CTL1Q03220 320 aaKnown RBP5.55□□□□□ -1.52
PRP40YKL012W RRD2Q12461 358 aa5.55□□□□□ -1.52
PRP40YKL012W YML002WP0CF17 737 aa5.54□□□□□ -1.52
PRP40YKL012W ATP10P18496 279 aa5.54□□□□□ -1.52
PRP40YKL012W TYR1P20049 452 aa5.54□□□□□ -1.52
PRP40YKL012W MMS4P38257 691 aa5.54□□□□□ -1.52
PRP40YKL012W VHC1P38329 1120 aa5.54□□□□□ -1.52
PRP40YKL012W SNO3P43544 222 aa5.54□□□□□ -1.52
PRP40YKL012W RHO4Q00246 291 aa5.54□□□□□ -1.52
PRP40YKL012W VTC3Q02725 835 aa5.54□□□□□ -1.52
PRP40YKL012W RSC9Q03124 581 aa5.54□□□□□ -1.52
PRP40YKL012W POS5Q06892 414 aa5.54□□□□□ -1.52
PRP40YKL012W BNR1P40450 1375 aa5.54□□□□□ -1.52
PRP40YKL012W GYP6P32806 458 aa5.53□□□□□ -1.52
PRP40YKL012W VPS25P47142 202 aa5.53□□□□□ -1.52
PRP40YKL012W MLC1P53141 149 aa5.53□□□□□ -1.52
PRP40YKL012W TOF1P53840 1238 aa5.53□□□□□ -1.52
PRP40YKL012W YPL014WQ02606 381 aa5.53□□□□□ -1.52
PRP40YKL012W NUP100Q02629 959 aa5.53□□□□□ -1.52
PRP40YKL012W DCS1Q06151 350 aa5.53□□□□□ -1.52
PRP40YKL012W SSK1Q07084 712 aa5.53□□□□□ -1.52
PRP40YKL012W HIF1Q12373 385 aa5.53□□□□□ -1.52
PRP40YKL012W SUC2P00724 532 aa5.52□□□□□ -1.53
PRP40YKL012W ERG11P10614 530 aa5.52□□□□□ -1.53
PRP40YKL012W KRE2P27809 442 aa5.52□□□□□ -1.53
PRP40YKL012W MSP1P28737 362 aa5.52□□□□□ -1.53
PRP40YKL012W POP2P39008 433 aa5.52□□□□□ -1.53
PRP40YKL012W VRG4P40107 337 aa5.52□□□□□ -1.53
PRP40YKL012W COP1P53622 1201 aaKnown RBP5.52□□□□□ -1.53
PRP40YKL012W RHO5P53879 331 aaKnown RBP5.52□□□□□ -1.53
PRP40YKL012W KTR5P53966 522 aaPredicted RBP5.52□□□□□ -1.53
PRP40YKL012W DIS3Q08162 1001 aaKnown RBP5.52□□□□□ -1.53
PRP40YKL012W RKM1Q08961 583 aaPredicted RBP5.52□□□□□ -1.53
PRP40YKL012W YPR089WO13585 888 aa5.52□□□□□ -1.53
PRP40YKL012W CYB2P00175 591 aa5.52□□□□□ -1.53
PRP40YKL012W HOM2P13663 365 aaKnown RBP5.52□□□□□ -1.53
PRP40YKL012W ATP11P32453 318 aa5.52□□□□□ -1.53
PRP40YKL012W UIP5P36137 443 aa5.52□□□□□ -1.53
PRP40YKL012W TOM71P38825 639 aaKnown RBP5.52□□□□□ -1.53
PRP40YKL012W VHS2P40463 436 aa5.52□□□□□ -1.53
PRP40YKL012W TFG2P41896 400 aaPredicted RBP5.52□□□□□ -1.53
PRP40YKL012W RPS0BP46654 252 aaKnown RBP5.52□□□□□ -1.53
PRP40YKL012W ALT2P52892 507 aa5.52□□□□□ -1.53
PRP40YKL012W MTR10Q99189 972 aa5.52□□□□□ -1.53
PRP40YKL012W TRX1P22217 103 aaKnown RBP5.51□□□□□ -1.53
PRP40YKL012W RPS2P25443 254 aaKnown RBP5.51□□□□□ -1.53
PRP40YKL012W SIN4P32259 974 aa5.51□□□□□ -1.53
PRP40YKL012W ZTA1P38230 334 aaKnown RBP5.51□□□□□ -1.53
PRP40YKL012W SIF2P38262 535 aa5.51□□□□□ -1.53
PRP40YKL012W SYG1P40528 902 aa5.51□□□□□ -1.53
PRP40YKL012W SMA1Q02651 245 aa5.51□□□□□ -1.53
PRP40YKL012W YLR456WQ06199 204 aa5.51□□□□□ -1.53
PRP40YKL012W BAR1P12630 587 aa5.5□□□□□ -1.53
PRP40YKL012W BEM1P29366 551 aa5.5□□□□□ -1.53
PRP40YKL012W PRP21P32524 280 aaPredicted RBP5.5□□□□□ -1.53
PRP40YKL012W YSW1P38280 609 aa5.5□□□□□ -1.53
PRP40YKL012W CFD1P40558 293 aa5.5□□□□□ -1.53
PRP40YKL012W FYV8P46949 817 aaKnown RBP5.5□□□□□ -1.53
PRP40YKL012W PPM1Q04081 328 aa5.5□□□□□ -1.53
PRP40YKL012W MDM30Q05930 598 aa5.5□□□□□ -1.53
PRP40YKL012W YLR112WQ12130 139 aa5.5□□□□□ -1.53
PRP40YKL012W RPL6BP05739 176 aaKnown RBP5.5□□□□□ -1.53
PRP40YKL012W SEC63P14906 663 aa5.5□□□□□ -1.53
PRP40YKL012W PHO84P25297 587 aaKnown RBP5.5□□□□□ -1.53
PRP40YKL012W ASC1P38011 319 aaKnown RBP5.5□□□□□ -1.53
PRP40YKL012W RFC3P38629 340 aa5.5□□□□□ -1.53
PRP40YKL012W FAD1P38913 306 aa5.5□□□□□ -1.53
PRP40YKL012W POP1P41812 875 aa5.5□□□□□ -1.53
PRP40YKL012W YPT11P48559 417 aa5.5□□□□□ -1.53
PRP40YKL012W OCA2P53949 197 aa5.5□□□□□ -1.53
PRP40YKL012W RPL6AQ02326 176 aaKnown RBP5.5□□□□□ -1.53
PRP40YKL012W MON2P48563 1636 aaPredicted RBP5.49□□□□□ -1.53
PRP40YKL012W TY1B-AO13527 1196 aaKnown RBP5.49□□□□□ -1.53
PRP40YKL012W MES1P00958 751 aaKnown RBP5.49□□□□□ -1.53
PRP40YKL012W ARO3P14843 370 aaKnown RBP5.49□□□□□ -1.53
PRP40YKL012W RHB1P25378 209 aa5.49□□□□□ -1.53
PRP40YKL012W GID7P25569 745 aa5.49□□□□□ -1.53
PRP40YKL012W FUN19P28003 413 aaPredicted RBP5.49□□□□□ -1.53
PRP40YKL012W SMI1P32566 505 aa5.49□□□□□ -1.53
PRP40YKL012W ADH5P38113 351 aaKnown RBP5.49□□□□□ -1.53
PRP40YKL012W WSS1P38838 269 aa5.49□□□□□ -1.53
PRP40YKL012W FET5P43561 622 aa5.49□□□□□ -1.53
PRP40YKL012W SEC5P89102 971 aa5.49□□□□□ -1.53
PRP40YKL012W LGE1Q02796 332 aaKnown RBP5.49□□□□□ -1.53
PRP40YKL012W EKI1Q03764 534 aa5.49□□□□□ -1.53
PRP40YKL012W DIC1Q06143 298 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms