RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	PRP4	P20053	465 aa	Known RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	GIT1	P25346	518 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	RPC19	P28000	142 aa	Known RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	YBL010C	P32788	280 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	ALY1	P36117	915 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	THI2	P38141	450 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	GIC1	P38785	314 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	QNS1	P38795	714 aa	Known RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	ASG1	P40467	964 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	DOT5	P40553	215 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
AVT1	YJR001W	IRC24	P40580	263 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	YJL181W	P46987	611 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	APT1	P49435	187 aa	Known RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	MPP6	P53725	186 aa	Predicted RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	SQS1	P53866	767 aa	Known RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	ATG21	Q02887	496 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	SRL4	Q03085	281 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	SRT1	Q03175	343 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	YLR297W	Q05899	129 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	DCR2	Q05924	578 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	PUS7	Q08647	676 aa	Known RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	ESA1	Q08649	445 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	YPL225W	Q08971	146 aa	Known RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	THP3	Q12049	470 aa	Known RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	TGS1	Q12052	315 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	SUL2	Q12325	893 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	HMS1	Q12398	434 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	LPD1	P09624	499 aa	Known RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	TCP1	P12612	559 aa	Known RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	KGD1	P20967	1014 aa	Known RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	CMK2	P22517	447 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	ARG1	P22768	420 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	APL1	P27351	700 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	FAA1	P30624	700 aa	Known RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	MAE1	P36013	669 aa	Known RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	AUR1	P36107	401 aa	Predicted RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	CDS1	P38221	457 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	YAR028W	P39548	234 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	JHD1	P40034	492 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	ICE2	P40499	491 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	UFE1	P41834	346 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	QRI1	P43123	477 aa	Known RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	MPS3	P47069	682 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	ARH1	P48360	493 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	YGL138C	P53122	345 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	YGR066C	P53242	292 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	SSU72	P53538	206 aa	Predicted RBP	4.37	□□□□□ -1.71
AVT1	YJR001W	PPN1	Q04119	674 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	GTO3	Q04806	366 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	ADY4	Q05955	493 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	THI3	Q07471	609 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	PUS9	Q12069	462 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	UPC2	Q12151	913 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	OSW2	Q12202	724 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	RTR2	Q12378	196 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	NBL1	Q3E7Y6	73 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	MTR10	Q99189	972 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	YPT6	Q99260	215 aa		4.37	□□□□□ -1.71
AVT1	YJR001W	URB1	P34241	1764 aa	Known RBP	4.36	□□□□□ -1.71
AVT1	YJR001W	FKS3	Q04952	1785 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	HXK2	P04807	486 aa	Known RBP	4.36	□□□□□ -1.71
AVT1	YJR001W	GPA1	P08539	472 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	PCT1	P13259	424 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	TUP1	P16649	713 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	URA4	P20051	364 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	IME1	P21190	360 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	UBA1	P22515	1024 aa	Known RBP	4.36	□□□□□ -1.71
AVT1	YJR001W	RVS161	P25343	265 aa	Known RBP	4.36	□□□□□ -1.71
AVT1	YJR001W	HSP30	P25619	332 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	SEC61	P32915	480 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	YPT7	P32939	208 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	AHP1	P38013	176 aa	Known RBP	4.36	□□□□□ -1.71
AVT1	YJR001W	TDP1	P38319	544 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	MIP6	P38760	659 aa	Known RBP	4.36	□□□□□ -1.71
AVT1	YJR001W	CCT6	P39079	546 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	YFL054C	P43549	646 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	YFR018C	P43599	363 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	VAC7	P53950	1165 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	ATC1	Q04005	294 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	COX20	Q04935	205 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	YLR173W	Q06247	608 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	YLR031W	Q07978	186 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	YPL216W	Q08964	1102 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	IES3	Q12345	250 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	VCX1	Q99385	411 aa		4.36	□□□□□ -1.71
AVT1	YJR001W	STE2	D6VTK4	431 aa		4.35	□□□□□ -1.71
AVT1	YJR001W	VPS63	O13549	108 aa		4.35	□□□□□ -1.71
AVT1	YJR001W	PMA1	P05030	918 aa	Known RBP	4.35	□□□□□ -1.71
AVT1	YJR001W	RAD7	P06779	565 aa		4.35	□□□□□ -1.71
AVT1	YJR001W	CDC4	P07834	779 aa		4.35	□□□□□ -1.71
AVT1	YJR001W	RFA1	P22336	621 aa	Known RBP	4.35	□□□□□ -1.71
AVT1	YJR001W	VPS34	P22543	875 aa		4.35	□□□□□ -1.71
AVT1	YJR001W	ATP11	P32453	318 aa		4.35	□□□□□ -1.71
AVT1	YJR001W	KES1	P35844	434 aa	Known RBP	4.35	□□□□□ -1.71
AVT1	YJR001W	YKL070W	P36087	169 aa		4.35	□□□□□ -1.71
AVT1	YJR001W	MRX3	P38172	270 aa		4.35	□□□□□ -1.71
AVT1	YJR001W	EGD2	P38879	174 aa	Known RBP	4.35	□□□□□ -1.71
AVT1	YJR001W	SLM1	P40485	686 aa		4.35	□□□□□ -1.71
AVT1	YJR001W	YIL001W	P40560	513 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms