RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W KAE1P36132 386 aa4.67□□□□□ -1.66
VPS29YHR012W TAT1P38085 619 aa4.67□□□□□ -1.66
VPS29YHR012W RRN10P38204 145 aa4.67□□□□□ -1.66
VPS29YHR012W GGC1P38988 300 aa4.67□□□□□ -1.66
VPS29YHR012W CCT2P39076 527 aaKnown RBP4.67□□□□□ -1.66
VPS29YHR012W MBP1P39678 833 aa4.67□□□□□ -1.66
VPS29YHR012W EMP65P40085 556 aa4.67□□□□□ -1.66
VPS29YHR012W MAD2P40958 196 aa4.67□□□□□ -1.66
VPS29YHR012W KTR5P53966 522 aaPredicted RBP4.67□□□□□ -1.66
VPS29YHR012W MRS2Q01926 470 aa4.67□□□□□ -1.66
VPS29YHR012W FMP45Q07651 309 aa4.67□□□□□ -1.66
VPS29YHR012W RUD3Q12234 484 aaKnown RBP4.67□□□□□ -1.66
VPS29YHR012W PST1Q12355 444 aa4.67□□□□□ -1.66
VPS29YHR012W TRA1P38811 3744 aa4.67□□□□□ -1.66
VPS29YHR012W COX1P00401 534 aa4.66□□□□□ -1.66
VPS29YHR012W RAD1P06777 1100 aa4.66□□□□□ -1.66
VPS29YHR012W BAS1P22035 811 aa4.66□□□□□ -1.66
VPS29YHR012W AMD2P22580 549 aa4.66□□□□□ -1.66
VPS29YHR012W NAR1P23503 491 aaKnown RBP4.66□□□□□ -1.66
VPS29YHR012W FPS1P23900 669 aa4.66□□□□□ -1.66
VPS29YHR012W CPR3P25719 182 aa4.66□□□□□ -1.66
VPS29YHR012W HES1P35843 434 aa4.66□□□□□ -1.66
VPS29YHR012W KKQ8P36004 724 aa4.66□□□□□ -1.66
VPS29YHR012W REI1P38344 393 aaPredicted RBP4.66□□□□□ -1.66
VPS29YHR012W MUP3P38734 546 aa4.66□□□□□ -1.66
VPS29YHR012W REV7P38927 245 aa4.66□□□□□ -1.66
VPS29YHR012W MET30P39014 640 aa4.66□□□□□ -1.66
VPS29YHR012W FRT2P39734 528 aa4.66□□□□□ -1.66
VPS29YHR012W SER3P40054 469 aa4.66□□□□□ -1.66
VPS29YHR012W APQ12P40532 138 aa4.66□□□□□ -1.66
VPS29YHR012W IRC24P40580 263 aa4.66□□□□□ -1.66
VPS29YHR012W YGL260WP53056 76 aa4.66□□□□□ -1.66
VPS29YHR012W SLT2Q00772 484 aa4.66□□□□□ -1.66
VPS29YHR012W SRP1Q02821 542 aaKnown RBP4.66□□□□□ -1.66
VPS29YHR012W CRN1Q06440 651 aa4.66□□□□□ -1.66
VPS29YHR012W AKR2Q12013 749 aa4.66□□□□□ -1.66
VPS29YHR012W GLO4Q12320 285 aa4.66□□□□□ -1.66
VPS29YHR012W CDC8P00572 216 aa4.65□□□□□ -1.67
VPS29YHR012W TEF1P02994 458 aaKnown RBP4.65□□□□□ -1.67
VPS29YHR012W MGR1P25573 417 aa4.65□□□□□ -1.67
VPS29YHR012W YCR102CP25608 368 aa4.65□□□□□ -1.67
VPS29YHR012W DPB3P27344 201 aa4.65□□□□□ -1.67
VPS29YHR012W SSH4P32343 579 aa4.65□□□□□ -1.67
VPS29YHR012W CDC12P32468 407 aaKnown RBP4.65□□□□□ -1.67
VPS29YHR012W SEF1P34228 1148 aa4.65□□□□□ -1.67
VPS29YHR012W SOL2P37262 315 aa4.65□□□□□ -1.67
VPS29YHR012W ASC1P38011 319 aaKnown RBP4.65□□□□□ -1.67
VPS29YHR012W PRP39P39682 629 aaKnown RBP4.65□□□□□ -1.67
VPS29YHR012W SSP120P39931 234 aaKnown RBP4.65□□□□□ -1.67
VPS29YHR012W HOS4P40480 1083 aa4.65□□□□□ -1.67
VPS29YHR012W MET12P46151 657 aa4.65□□□□□ -1.67
VPS29YHR012W SHY1P53266 389 aa4.65□□□□□ -1.67
VPS29YHR012W FHN1P53279 174 aa4.65□□□□□ -1.67
VPS29YHR012W MAL13P53338 473 aa4.65□□□□□ -1.67
VPS29YHR012W YNL058CP53947 316 aa4.65□□□□□ -1.67
VPS29YHR012W SNP1Q00916 300 aaPredicted RBP4.65□□□□□ -1.67
VPS29YHR012W TAF11Q04226 346 aa4.65□□□□□ -1.67
VPS29YHR012W ISR1Q06098 443 aaKnown RBP4.65□□□□□ -1.67
VPS29YHR012W PUS9Q12069 462 aa4.65□□□□□ -1.67
VPS29YHR012W HUA2Q12134 243 aa4.65□□□□□ -1.67
VPS29YHR012W UBX3Q12229 455 aa4.65□□□□□ -1.67
VPS29YHR012W YPR011CQ12251 326 aa4.65□□□□□ -1.67
VPS29YHR012W MDY2Q12285 212 aa4.65□□□□□ -1.67
VPS29YHR012W KCS1Q12494 1050 aa4.65□□□□□ -1.67
VPS29YHR012W NOP58Q12499 511 aaKnown RBP4.65□□□□□ -1.67
VPS29YHR012W YBR056W-AI2HB52 66 aa4.64□□□□□ -1.67
VPS29YHR012W CDC9P04819 755 aa4.64□□□□□ -1.67
VPS29YHR012W HEM15P16622 393 aa4.64□□□□□ -1.67
VPS29YHR012W AGP1P25376 633 aa4.64□□□□□ -1.67
VPS29YHR012W PMT2P31382 759 aa4.64□□□□□ -1.67
VPS29YHR012W ERG1P32476 496 aaKnown RBP4.64□□□□□ -1.67
VPS29YHR012W CDC5P32562 705 aa4.64□□□□□ -1.67
VPS29YHR012W PTM1P32857 523 aa4.64□□□□□ -1.67
VPS29YHR012W ATO2P32907 282 aa4.64□□□□□ -1.67
VPS29YHR012W SDH3P33421 198 aa4.64□□□□□ -1.67
VPS29YHR012W APT2P36973 181 aa4.64□□□□□ -1.67
VPS29YHR012W MIC19P43594 170 aa4.64□□□□□ -1.67
VPS29YHR012W VPS73P53142 486 aaKnown RBP4.64□□□□□ -1.67
VPS29YHR012W EFM5P53200 248 aaKnown RBP4.64□□□□□ -1.67
VPS29YHR012W BUD32P53323 261 aa4.64□□□□□ -1.67
VPS29YHR012W ERG13P54839 491 aaKnown RBP4.64□□□□□ -1.67
VPS29YHR012W AAT1Q01802 451 aa4.64□□□□□ -1.67
VPS29YHR012W SHR3Q02774 210 aa4.64□□□□□ -1.67
VPS29YHR012W YPL109CQ02981 657 aa4.64□□□□□ -1.67
VPS29YHR012W GOT1Q03554 138 aa4.64□□□□□ -1.67
VPS29YHR012W TAF12Q03761 539 aa4.64□□□□□ -1.67
VPS29YHR012W NUP53Q03790 475 aa4.64□□□□□ -1.67
VPS29YHR012W BOP2Q06150 570 aa4.64□□□□□ -1.67
VPS29YHR012W OMS1Q06668 471 aa4.64□□□□□ -1.67
VPS29YHR012W VAM6Q07468 1049 aa4.64□□□□□ -1.67
VPS29YHR012W YEH1Q07804 573 aa4.64□□□□□ -1.67
VPS29YHR012W YOL159CQ08300 171 aa4.64□□□□□ -1.67
VPS29YHR012W RAX1Q08760 435 aa4.64□□□□□ -1.67
VPS29YHR012W REX3Q12090 404 aa4.64□□□□□ -1.67
VPS29YHR012W TPO4Q12256 659 aa4.64□□□□□ -1.67
VPS29YHR012W TY1A-DR3Q12441 440 aa4.64□□□□□ -1.67
VPS29YHR012W AHA1Q12449 350 aaKnown RBP4.64□□□□□ -1.67
VPS29YHR012W RGS2Q99188 309 aa4.64□□□□□ -1.67
VPS29YHR012W RPS21AP0C0V8 87 aaKnown RBP4.63□□□□□ -1.67
VPS29YHR012W ADH4P10127 382 aa4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms