RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTR3	YFR029W	IRC8	P47046	822 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	MPS3	P47069	682 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	JJJ3	P47138	172 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	RPS7B	P48164	190 aa	Known RBP	4.05	□□□□□ -1.76
PTR3	YFR029W	TEX1	P53851	422 aa	Known RBP	4.05	□□□□□ -1.76
PTR3	YFR029W	OCA2	P53949	197 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	SKO1	Q02100	647 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	EKI1	Q03764	534 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	ENT5	Q03769	411 aa	Known RBP	4.05	□□□□□ -1.76
PTR3	YFR029W	GIM5	Q04493	163 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	HOF1	Q05080	669 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	RTT103	Q05543	409 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	RRG8	Q06109	277 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	ATG23	Q06671	453 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	NRT1	Q08485	598 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	RDR1	Q08904	546 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	PKH2	Q12236	1081 aa	Known RBP	4.05	□□□□□ -1.76
PTR3	YFR029W	ZPS1	Q12512	249 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	ERG20	P08524	352 aa	Known RBP	4.04	□□□□□ -1.76
PTR3	YFR029W	MET3	P08536	511 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	PMA2	P19657	947 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	SEC15	P22224	910 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	DAL2	P25335	343 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	LRE1	P25579	583 aa	Known RBP	4.04	□□□□□ -1.76
PTR3	YFR029W	YCR016W	P25617	290 aa	Known RBP	4.04	□□□□□ -1.76
PTR3	YFR029W	RFA2	P26754	273 aa	Known RBP	4.04	□□□□□ -1.76
PTR3	YFR029W	DCG1	P32460	244 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	RAD23	P32628	398 aa	Known RBP	4.04	□□□□□ -1.76
PTR3	YFR029W	AIM26	P32858	118 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	YBR259W	P38338	688 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	SAF1	P38352	637 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	SBE22	P38814	852 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	RCY1	P39531	840 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	FMP33	P46998	180 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	COS5	P47187	383 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	EAF7	P53911	425 aa	Known RBP	4.04	□□□□□ -1.76
PTR3	YFR029W	SLT2	Q00772	484 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	MUK1	Q02866	612 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	NDL1	Q06568	189 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	COS7	Q07788	383 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	GRE1	Q08969	168 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	AI3	P03877	415 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	MATALPHA1	P0CY06	175 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	HMLALPHA1	P0CY07	175 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	SAM1	P10659	382 aa	Known RBP	4.04	□□□□□ -1.76
PTR3	YFR029W	SEC12	P11655	471 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	MSB1	P21339	1137 aa	Known RBP	4.04	□□□□□ -1.76
PTR3	YFR029W	YCP4	P25349	247 aa	Known RBP	4.04	□□□□□ -1.76
PTR3	YFR029W	PTC6	P25646	442 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	YUR1	P26725	428 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	GCD7	P32502	381 aa	Predicted RBP	4.04	□□□□□ -1.76
PTR3	YFR029W	MRPL10	P36520	322 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	PCA1	P38360	1216 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	END3	P39013	349 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	TOS3	P43637	560 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	YJL118W	P47022	219 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	BRO1	P48582	844 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	YMR160W	Q03823	816 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	CMS1	Q07897	291 aa	Known RBP	4.04	□□□□□ -1.76
PTR3	YFR029W	YDL007C-A	Q2V2Q0	85 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	CMC2	Q3E7A4	109 aa		4.04	□□□□□ -1.76
PTR3	YFR029W	BRR1	Q99177	341 aa	Predicted RBP	4.04	□□□□□ -1.76
PTR3	YFR029W	CAR1	P00812	333 aa	Known RBP	4.03	□□□□□ -1.76
PTR3	YFR029W	ZIP1	P31111	875 aa		4.03	□□□□□ -1.76
PTR3	YFR029W	GDH2	P33327	1092 aa	Known RBP	4.03	□□□□□ -1.76
PTR3	YFR029W	YGL114W	P53134	725 aa		4.03	□□□□□ -1.76
PTR3	YFR029W	CAF130	P53280	1122 aa	Predicted RBP	4.03	□□□□□ -1.76
PTR3	YFR029W	EFM6	P53970	246 aa		4.03	□□□□□ -1.76
PTR3	YFR029W	RSM24	Q03976	319 aa		4.03	□□□□□ -1.76
PTR3	YFR029W	YMR130W	Q04223	302 aa		4.03	□□□□□ -1.76
PTR3	YFR029W	YOL159C	Q08300	171 aa		4.03	□□□□□ -1.76
PTR3	YFR029W	DSE3	Q08729	430 aa		4.03	□□□□□ -1.76
PTR3	YFR029W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
PTR3	YFR029W	LEA1	Q08963	238 aa	Predicted RBP	4.03	□□□□□ -1.76
PTR3	YFR029W	GET4	Q12125	312 aa		4.03	□□□□□ -1.76
PTR3	YFR029W	PAA1	Q12447	191 aa	Known RBP	4.03	□□□□□ -1.76
PTR3	YFR029W	ARG4	P04076	463 aa	Predicted RBP	4.02	□□□□□ -1.77
PTR3	YFR029W	CDC6	P09119	513 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	KIN82	P25341	720 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	YCR015C	P25616	317 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	FRE1	P32791	686 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	PET100	P38958	111 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	YJL206C	P39529	758 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	YJL193W	P39542	402 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	ERG10	P41338	398 aa	Known RBP	4.02	□□□□□ -1.77
PTR3	YFR029W	CHA4	P43634	648 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	RFX1	P48743	811 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	MIG2	P53035	382 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	COX18	P53239	316 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	FIN1	Q03898	291 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	MYO5	Q04439	1219 aa	Known RBP	4.02	□□□□□ -1.77
PTR3	YFR029W	COX20	Q04935	205 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	COQ9	Q05779	260 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	PDR8	Q06149	701 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	ATG26	Q06321	1198 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	YFT2	Q06676	274 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	ABP140	Q08641	628 aa	Known RBP	4.02	□□□□□ -1.77
PTR3	YFR029W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
PTR3	YFR029W	GLE1	Q12315	538 aa		4.02	□□□□□ -1.77
PTR3	YFR029W	CHS2	P14180	963 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms