RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C PEX2P32800 271 aa1.31□□□□□ -2.2
SWI4YER111C SHP1P34223 423 aa1.31□□□□□ -2.2
SWI4YER111C RRP1P35178 278 aaPredicted RBP1.31□□□□□ -2.2
SWI4YER111C VHC1P38329 1120 aa1.31□□□□□ -2.2
SWI4YER111C PHM8P40025 321 aa1.31□□□□□ -2.2
SWI4YER111C BUD27P43573 796 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
SWI4YER111C IRC7P43623 340 aa1.31□□□□□ -2.2
SWI4YER111C HOT1Q03213 719 aa1.31□□□□□ -2.2
SWI4YER111C BSP1Q06604 576 aa1.31□□□□□ -2.2
SWI4YER111C DIS3Q08162 1001 aaKnown RBP1.31□□□□□ -2.2
SWI4YER111C RPS10AQ08745 105 aaPredicted RBP1.31□□□□□ -2.2
SWI4YER111C RPN5Q12250 445 aaKnown RBP1.31□□□□□ -2.2
SWI4YER111C RRI1Q12468 440 aa1.31□□□□□ -2.2
SWI4YER111C YMR085WP0CF18 432 aa1.3□□□□□ -2.2
SWI4YER111C KRS1P15180 591 aaKnown RBP1.3□□□□□ -2.2
SWI4YER111C TOA1P32773 286 aa1.3□□□□□ -2.2
SWI4YER111C REC114P32841 428 aa1.3□□□□□ -2.2
SWI4YER111C NIP100P33420 868 aa1.3□□□□□ -2.2
SWI4YER111C OCT1P35999 772 aa1.3□□□□□ -2.2
SWI4YER111C SLM4P38247 162 aa1.3□□□□□ -2.2
SWI4YER111C RIX1P38883 763 aaPredicted RBP1.3□□□□□ -2.2
SWI4YER111C YIL060WP40519 144 aa1.3□□□□□ -2.2
SWI4YER111C ALK1P43633 760 aaKnown RBP1.3□□□□□ -2.2
SWI4YER111C RPS0BP46654 252 aaKnown RBP1.3□□□□□ -2.2
SWI4YER111C BUD32P53323 261 aa1.3□□□□□ -2.2
SWI4YER111C SKO1Q02100 647 aa1.3□□□□□ -2.2
SWI4YER111C ADA2Q02336 434 aa1.3□□□□□ -2.2
SWI4YER111C YMR160WQ03823 816 aa1.3□□□□□ -2.2
SWI4YER111C ARP10Q04549 284 aa1.3□□□□□ -2.2
SWI4YER111C ATG26Q06321 1198 aa1.3□□□□□ -2.2
SWI4YER111C KEL3Q08979 651 aaPredicted RBP1.3□□□□□ -2.2
SWI4YER111C AEP3Q12089 606 aa1.3□□□□□ -2.2
SWI4YER111C RHO2P06781 192 aa1.3□□□□□ -2.2
SWI4YER111C HOM2P13663 365 aaKnown RBP1.3□□□□□ -2.2
SWI4YER111C BUD5P25300 642 aaPredicted RBP1.3□□□□□ -2.2
SWI4YER111C ELO2P25358 347 aa1.3□□□□□ -2.2
SWI4YER111C MSP1P28737 362 aa1.3□□□□□ -2.2
SWI4YER111C BNA4P38169 460 aa1.3□□□□□ -2.2
SWI4YER111C ARN1P38731 627 aa1.3□□□□□ -2.2
SWI4YER111C FAD1P38913 306 aa1.3□□□□□ -2.2
SWI4YER111C MBB1P39534 108 aa1.3□□□□□ -2.2
SWI4YER111C YIF1P53845 314 aaKnown RBP1.3□□□□□ -2.2
SWI4YER111C YPL107WQ02873 248 aa1.3□□□□□ -2.2
SWI4YER111C GLO2Q05584 274 aa1.3□□□□□ -2.2
SWI4YER111C DCS1Q06151 350 aa1.3□□□□□ -2.2
SWI4YER111C NRT1Q08485 598 aa1.3□□□□□ -2.2
SWI4YER111C YLR112WQ12130 139 aa1.3□□□□□ -2.2
SWI4YER111C TY1B-AO13527 1196 aaKnown RBP1.3□□□□□ -2.2
SWI4YER111C LPD1P09624 499 aaKnown RBP1.3□□□□□ -2.2
SWI4YER111C PHO84P25297 587 aaKnown RBP1.3□□□□□ -2.2
SWI4YER111C BUD14P27637 709 aa1.3□□□□□ -2.2
SWI4YER111C RIM1P32445 135 aaKnown RBP1.3□□□□□ -2.2
SWI4YER111C HOT13P36078 116 aa1.3□□□□□ -2.2
SWI4YER111C YKL023WP36103 277 aaKnown RBP1.3□□□□□ -2.2
SWI4YER111C PAC2P39937 518 aa1.3□□□□□ -2.2
SWI4YER111C YTA12P40341 825 aa1.3□□□□□ -2.2
SWI4YER111C ATG27P46989 271 aa1.3□□□□□ -2.2
SWI4YER111C AIM22P47051 409 aa1.3□□□□□ -2.2
SWI4YER111C SWF1Q04629 336 aa1.3□□□□□ -2.2
SWI4YER111C SOV1Q04748 898 aa1.3□□□□□ -2.2
SWI4YER111C YDR341CQ05506 607 aaKnown RBP1.3□□□□□ -2.2
SWI4YER111C ADE13Q05911 482 aaKnown RBP1.3□□□□□ -2.2
SWI4YER111C MMR1Q06324 491 aa1.3□□□□□ -2.2
SWI4YER111C SSK1Q07084 712 aa1.3□□□□□ -2.2
SWI4YER111C CUE5Q08412 411 aaKnown RBP1.3□□□□□ -2.2
SWI4YER111C YPL272CQ08984 517 aa1.3□□□□□ -2.2
SWI4YER111C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
SWI4YER111C VAM3Q12241 283 aa1.3□□□□□ -2.2
SWI4YER111C SUT2Q12286 268 aa1.3□□□□□ -2.2
SWI4YER111C POL1P13382 1468 aa1.3□□□□□ -2.2
SWI4YER111C MES1P00958 751 aaKnown RBP1.29□□□□□ -2.2
SWI4YER111C CBP1P07252 654 aa1.29□□□□□ -2.2
SWI4YER111C PUT2P07275 575 aa1.29□□□□□ -2.2
SWI4YER111C TUB1P09733 447 aaKnown RBP1.29□□□□□ -2.2
SWI4YER111C CLN1P20437 546 aa1.29□□□□□ -2.2
SWI4YER111C MAK32P23060 363 aa1.29□□□□□ -2.2
SWI4YER111C ADY2P25613 283 aa1.29□□□□□ -2.2
SWI4YER111C GSY2P27472 705 aa1.29□□□□□ -2.2
SWI4YER111C RPS0AP32905 252 aaKnown RBP1.29□□□□□ -2.2
SWI4YER111C MTR2P34232 184 aaKnown RBP1.29□□□□□ -2.2
SWI4YER111C THI2P38141 450 aa1.29□□□□□ -2.2
SWI4YER111C PFF1P38244 976 aa1.29□□□□□ -2.2
SWI4YER111C LAG1P38703 411 aa1.29□□□□□ -2.2
SWI4YER111C RPN11P43588 306 aaKnown RBP1.29□□□□□ -2.2
SWI4YER111C YJL132WP47014 750 aa1.29□□□□□ -2.2
SWI4YER111C URB2P47108 1174 aa1.29□□□□□ -2.2
SWI4YER111C COS5P47187 383 aa1.29□□□□□ -2.2
SWI4YER111C APT1P49435 187 aaKnown RBP1.29□□□□□ -2.2
SWI4YER111C MRK1P50873 501 aa1.29□□□□□ -2.2
SWI4YER111C YGL108CP53139 140 aa1.29□□□□□ -2.2
SWI4YER111C ASI1P54074 624 aa1.29□□□□□ -2.2
SWI4YER111C LGE1Q02796 332 aaKnown RBP1.29□□□□□ -2.2
SWI4YER111C ACL4Q03771 387 aa1.29□□□□□ -2.2
SWI4YER111C YDR415CQ04033 374 aaPredicted RBP1.29□□□□□ -2.2
SWI4YER111C POS5Q06892 414 aa1.29□□□□□ -2.2
SWI4YER111C COS7Q07788 383 aa1.29□□□□□ -2.2
SWI4YER111C PGC1Q08959 321 aa1.29□□□□□ -2.2
SWI4YER111C PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2 RIP-Chip
SWI4YER111C HIF1Q12373 385 aa1.29□□□□□ -2.2
SWI4YER111C DRS2P39524 1355 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms