RNA–Protein interactions for RNA: YER088C-A

YER088C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YER088C-A, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088C-AYER088C-A OCA1P50946 238 aaPredicted RBP1.79□□□□□ -2.12
YER088C-AYER088C-A CUL3P53202 744 aa1.79□□□□□ -2.12
YER088C-AYER088C-A BUD32P53323 261 aa1.79□□□□□ -2.12
YER088C-AYER088C-A ASI1P54074 624 aa1.79□□□□□ -2.12
YER088C-AYER088C-A YPL014WQ02606 381 aa1.79□□□□□ -2.12
YER088C-AYER088C-A OAZ1Q02803 292 aa1.79□□□□□ -2.12
YER088C-AYER088C-A PEX25Q02969 394 aa1.79□□□□□ -2.12
YER088C-AYER088C-A MSC1Q03104 513 aa1.79□□□□□ -2.12
YER088C-AYER088C-A CTL1Q03220 320 aaKnown RBP1.79□□□□□ -2.12
YER088C-AYER088C-A IZH1Q03419 316 aa1.79□□□□□ -2.12
YER088C-AYER088C-A YDR415CQ04033 374 aaPredicted RBP1.79□□□□□ -2.12
YER088C-AYER088C-A ARP10Q04549 284 aa1.79□□□□□ -2.12
YER088C-AYER088C-A HEL2Q05580 639 aaKnown RBP1.79□□□□□ -2.12
YER088C-AYER088C-A DON1Q05610 365 aa1.79□□□□□ -2.12
YER088C-AYER088C-A RBS1Q05672 457 aaKnown RBP1.79□□□□□ -2.12
YER088C-AYER088C-A SSK1Q07084 712 aa1.79□□□□□ -2.12
YER088C-AYER088C-A DCI1Q08558 271 aa1.79□□□□□ -2.12
YER088C-AYER088C-A GPM3Q12326 303 aa1.79□□□□□ -2.12
YER088C-AYER088C-A MES1P00958 751 aaKnown RBP1.78□□□□□ -2.12
YER088C-AYER088C-A GAL4P04386 881 aa1.78□□□□□ -2.12
YER088C-AYER088C-A PDE2P06776 526 aa1.78□□□□□ -2.12
YER088C-AYER088C-A CBP1P07252 654 aa1.78□□□□□ -2.12
YER088C-AYER088C-A YFL068WP0CX99 160 aa1.78□□□□□ -2.12
YER088C-AYER088C-A YLL066W-AP0CY00 160 aa1.78□□□□□ -2.12
YER088C-AYER088C-A YLL067W-AP0CY01 160 aa1.78□□□□□ -2.12
YER088C-AYER088C-A NAT1P12945 854 aaKnown RBP1.78□□□□□ -2.12
YER088C-AYER088C-A TYR1P20049 452 aa1.78□□□□□ -2.12
YER088C-AYER088C-A CPR2P23285 205 aa1.78□□□□□ -2.12
YER088C-AYER088C-A URA7P28274 579 aaKnown RBP1.78□□□□□ -2.12
YER088C-AYER088C-A BRF1P29056 596 aa1.78□□□□□ -2.12
YER088C-AYER088C-A BEM1P29366 551 aa1.78□□□□□ -2.12
YER088C-AYER088C-A RPN2P32565 945 aaKnown RBP1.78□□□□□ -2.12
YER088C-AYER088C-A RML2P32611 393 aa1.78□□□□□ -2.12
YER088C-AYER088C-A REC114P32841 428 aa1.78□□□□□ -2.12
YER088C-AYER088C-A NIP100P33420 868 aa1.78□□□□□ -2.12
YER088C-AYER088C-A THI2P38141 450 aa1.78□□□□□ -2.12
YER088C-AYER088C-A SLM4P38247 162 aa1.78□□□□□ -2.12
YER088C-AYER088C-A LAG1P38703 411 aa1.78□□□□□ -2.12
YER088C-AYER088C-A RRP3P38712 501 aaKnown RBP1.78□□□□□ -2.12
YER088C-AYER088C-A UBA4P38820 440 aa1.78□□□□□ -2.12
YER088C-AYER088C-A EFM4P40516 257 aa1.78□□□□□ -2.12
YER088C-AYER088C-A BUD27P43573 796 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
YER088C-AYER088C-A TCB2P48231 1178 aa1.78□□□□□ -2.12
YER088C-AYER088C-A PYK2P52489 506 aaKnown RBP1.78□□□□□ -2.12
YER088C-AYER088C-A SHE10P53075 577 aa1.78□□□□□ -2.12
YER088C-AYER088C-A YGL108CP53139 140 aa1.78□□□□□ -2.12
YER088C-AYER088C-A RMD9P53140 646 aaKnown RBP1.78□□□□□ -2.12
YER088C-AYER088C-A PKP2P53170 491 aa1.78□□□□□ -2.12
YER088C-AYER088C-A YGR111WP53265 400 aa1.78□□□□□ -2.12
YER088C-AYER088C-A BTN2P53286 410 aa1.78□□□□□ -2.12
YER088C-AYER088C-A ZPR1P53303 486 aaKnown RBP1.78□□□□□ -2.12
YER088C-AYER088C-A SOL4P53315 255 aa1.78□□□□□ -2.12
YER088C-AYER088C-A HEF3P53978 1044 aaKnown RBP1.78□□□□□ -2.12
YER088C-AYER088C-A VPS9P54787 451 aa1.78□□□□□ -2.12
YER088C-AYER088C-A HOT1Q03213 719 aa1.78□□□□□ -2.12
YER088C-AYER088C-A YMR130WQ04223 302 aa1.78□□□□□ -2.12
YER088C-AYER088C-A DIS3Q08162 1001 aaKnown RBP1.78□□□□□ -2.12
YER088C-AYER088C-A BSC6Q08280 497 aa1.78□□□□□ -2.12
YER088C-AYER088C-A BRR1Q99177 341 aaPredicted RBP1.78□□□□□ -2.12
YER088C-AYER088C-A YLR278CQ05854 1341 aa1.77□□□□□ -2.13
YER088C-AYER088C-A HIP1P06775 603 aa1.77□□□□□ -2.13
YER088C-AYER088C-A RAD52P06778 471 aaKnown RBP1.77□□□□□ -2.13
YER088C-AYER088C-A RHO2P06781 192 aa1.77□□□□□ -2.13
YER088C-AYER088C-A PEP4P07267 405 aaKnown RBP1.77□□□□□ -2.13
YER088C-AYER088C-A BAR1P12630 587 aa1.77□□□□□ -2.13
YER088C-AYER088C-A PEP5P12868 1029 aa1.77□□□□□ -2.13
YER088C-AYER088C-A PRP2P20095 876 aaPredicted RBP1.77□□□□□ -2.13
YER088C-AYER088C-A CLN1P20437 546 aa1.77□□□□□ -2.13
YER088C-AYER088C-A ELO2P25358 347 aa1.77□□□□□ -2.13
YER088C-AYER088C-A PDR3P33200 976 aa1.77□□□□□ -2.13
YER088C-AYER088C-A LTV1P34078 463 aa1.77□□□□□ -2.13
YER088C-AYER088C-A MTR2P34232 184 aaKnown RBP1.77□□□□□ -2.13
YER088C-AYER088C-A YNK1P36010 153 aaKnown RBP1.77□□□□□ -2.13
YER088C-AYER088C-A VHC1P38329 1120 aa1.77□□□□□ -2.13
YER088C-AYER088C-A YHR210CP38893 341 aa1.77□□□□□ -2.13
YER088C-AYER088C-A TIF4631P39935 952 aaKnown RBP1.77□□□□□ -2.13
YER088C-AYER088C-A FET5P43561 622 aa1.77□□□□□ -2.13
YER088C-AYER088C-A ATG27P46989 271 aa1.77□□□□□ -2.13
YER088C-AYER088C-A YGL082WP53155 381 aa1.77□□□□□ -2.13
YER088C-AYER088C-A YNL181WP53878 407 aa1.77□□□□□ -2.13
YER088C-AYER088C-A SKO1Q02100 647 aa1.77□□□□□ -2.13
YER088C-AYER088C-A IVY1Q04934 453 aa1.77□□□□□ -2.13
YER088C-AYER088C-A GLO2Q05584 274 aa1.77□□□□□ -2.13
YER088C-AYER088C-A DCS1Q06151 350 aa1.77□□□□□ -2.13
YER088C-AYER088C-A POS5Q06892 414 aa1.77□□□□□ -2.13
YER088C-AYER088C-A SPE3Q12074 293 aaKnown RBP1.77□□□□□ -2.13
YER088C-AYER088C-A AEP3Q12089 606 aa1.77□□□□□ -2.13
YER088C-AYER088C-A YLR112WQ12130 139 aa1.77□□□□□ -2.13
YER088C-AYER088C-A VAM3Q12241 283 aa1.77□□□□□ -2.13
YER088C-AYER088C-A ISN1Q99312 450 aa1.77□□□□□ -2.13
YER088C-AYER088C-A TY1B-AO13527 1196 aaKnown RBP1.76□□□□□ -2.13
YER088C-AYER088C-A GPH1P06738 902 aaKnown RBP1.76□□□□□ -2.13
YER088C-AYER088C-A LPD1P09624 499 aaKnown RBP1.76□□□□□ -2.13
YER088C-AYER088C-A YML002WP0CF17 737 aa1.76□□□□□ -2.13
YER088C-AYER088C-A RPL42AP0CX27 106 aaKnown RBP1.76□□□□□ -2.13
YER088C-AYER088C-A RPL42BP0CX28 106 aaKnown RBP1.76□□□□□ -2.13
YER088C-AYER088C-A MSP1P28737 362 aa1.76□□□□□ -2.13
YER088C-AYER088C-A SNC1P31109 117 aa1.76□□□□□ -2.13
YER088C-AYER088C-A MSN2P33748 704 aa1.76□□□□□ -2.13
YER088C-AYER088C-A PHD1P36093 366 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms