RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	MIG2	P53035	382 aa		6.26	□□□□□ -1.41
VMA3	YEL027W	RTS3	P53289	263 aa		6.26	□□□□□ -1.41
VMA3	YEL027W	RHO3	Q00245	231 aa	Known RBP	6.26	□□□□□ -1.41
VMA3	YEL027W	AAT1	Q01802	451 aa		6.26	□□□□□ -1.41
VMA3	YEL027W	ROT1	Q03691	256 aa		6.26	□□□□□ -1.41
VMA3	YEL027W	YET2	Q04210	160 aa		6.26	□□□□□ -1.41
VMA3	YEL027W	YLR413W	Q06689	675 aa		6.26	□□□□□ -1.41
VMA3	YEL027W	CDA1	Q06702	301 aa		6.26	□□□□□ -1.41
VMA3	YEL027W	DIA2	Q08496	732 aa	Predicted RBP	6.26	□□□□□ -1.41
VMA3	YEL027W	YIG1	Q08956	461 aa		6.26	□□□□□ -1.41
VMA3	YEL027W	YPR202W	Q08993	238 aa		6.26	□□□□□ -1.41
VMA3	YEL027W	SUL2	Q12325	893 aa		6.26	□□□□□ -1.41
VMA3	YEL027W	CMR1	Q12510	522 aa	Known RBP	6.26	□□□□□ -1.41
VMA3	YEL027W	SAS5	Q99314	248 aa		6.26	□□□□□ -1.41
VMA3	YEL027W	LAT1	P12695	482 aa	Known RBP	6.25	□□□□□ -1.41
VMA3	YEL027W	PHO91	P27514	894 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	DGR2	P32330	852 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	HXT4	P32467	576 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	DOM34	P33309	386 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	EMC3	P36039	253 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	CAF4	P36130	643 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	YBR071W	P38243	211 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	UBS1	P38290	277 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	LYS1	P38998	373 aa	RIP-Chip data	6.25	□□□□□ -1.41	RIP-Chip
VMA3	YEL027W	HXT6	P39003	570 aa	Known RBP	6.25	□□□□□ -1.41
VMA3	YEL027W	HXT7	P39004	570 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	RIO2	P40160	425 aa	Known RBP	6.25	□□□□□ -1.41
VMA3	YEL027W	CFD1	P40558	293 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	YFR020W	P43600	232 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	MET12	P46151	657 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	MTR3	P48240	250 aa	Predicted RBP	6.25	□□□□□ -1.41
VMA3	YEL027W	IMA1	P53051	589 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	SDH1	Q00711	640 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	PRP38	Q00723	242 aa	Predicted RBP	6.25	□□□□□ -1.41
VMA3	YEL027W	IRC15	Q02733	499 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	HOT1	Q03213	719 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	ECM11	Q04110	302 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	YDR124W	Q04608	324 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	DIC1	Q06143	298 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	YOL036W	Q08206	761 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	BSC6	Q08280	497 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	SGT1	Q08446	395 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	YPL245W	Q12179	454 aa	Known RBP	6.25	□□□□□ -1.41
VMA3	YEL027W	YCL012C	Q8J0M4	134 aa		6.25	□□□□□ -1.41
VMA3	YEL027W	HRP1	Q99383	534 aa	Known RBP	6.25	□□□□□ -1.41
VMA3	YEL027W	HTA2	P04912	132 aa		6.24	□□□□□ -1.41
VMA3	YEL027W	PRT1	P06103	763 aa	Known RBP	6.24	□□□□□ -1.41
VMA3	YEL027W	PWP1	P21304	576 aa	Known RBP	6.24	□□□□□ -1.41
VMA3	YEL027W	SGV1	P23293	657 aa	Known RBP	6.24	□□□□□ -1.41
VMA3	YEL027W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	6.24	□□□□□ -1.41	not detected
VMA3	YEL027W	PET309	P32522	965 aa	Predicted RBP	6.24	□□□□□ -1.41
VMA3	YEL027W	YCR087C-A	P37263	153 aa		6.24	□□□□□ -1.41
VMA3	YEL027W	YHR033W	P38690	423 aa		6.24	□□□□□ -1.41
VMA3	YEL027W	TRM5	P38793	499 aa		6.24	□□□□□ -1.41
VMA3	YEL027W	AXL2	P38928	823 aa		6.24	□□□□□ -1.41
VMA3	YEL027W	GGC1	P38988	300 aa		6.24	□□□□□ -1.41
VMA3	YEL027W	LRO1	P40345	661 aa		6.24	□□□□□ -1.41
VMA3	YEL027W	ALR2	P43553	858 aa		6.24	□□□□□ -1.41
VMA3	YEL027W	MPS3	P47069	682 aa		6.24	□□□□□ -1.41
VMA3	YEL027W	GTO1	P48239	356 aa		6.24	□□□□□ -1.41
VMA3	YEL027W	SGF73	P53165	657 aa		6.24	□□□□□ -1.41
VMA3	YEL027W	COG2	P53271	262 aa		6.24	□□□□□ -1.41
VMA3	YEL027W	ARE2	P53629	642 aa	Known RBP	6.24	□□□□□ -1.41
VMA3	YEL027W	MPS1	P54199	764 aa		6.24	□□□□□ -1.41
VMA3	YEL027W	CTK1	Q03957	528 aa	Known RBP	6.24	□□□□□ -1.41
VMA3	YEL027W	OSW1	Q08692	278 aa		6.24	□□□□□ -1.41
VMA3	YEL027W	GPR1	Q12361	961 aa		6.24	□□□□□ -1.41
VMA3	YEL027W	RRP12	Q12754	1228 aa	Known RBP	6.24	□□□□□ -1.41
VMA3	YEL027W	HOG1	P32485	435 aa		6.23	□□□□□ -1.41
VMA3	YEL027W	STE14	P32584	239 aa		6.23	□□□□□ -1.41
VMA3	YEL027W	SKN1	P33336	771 aa		6.23	□□□□□ -1.41
VMA3	YEL027W	FTH1	P38310	465 aa		6.23	□□□□□ -1.41
VMA3	YEL027W	CAB2	P40506	365 aa		6.23	□□□□□ -1.41
VMA3	YEL027W	YJR142W	P47173	342 aa		6.23	□□□□□ -1.41
VMA3	YEL027W	KXD1	P53158	218 aa		6.23	□□□□□ -1.41
VMA3	YEL027W	YNR021W	P53723	404 aa	Known RBP	6.23	□□□□□ -1.41
VMA3	YEL027W	ARC35	P53731	342 aa	Known RBP	6.23	□□□□□ -1.41
VMA3	YEL027W	IDP3	P53982	420 aa	Known RBP	6.23	□□□□□ -1.41
VMA3	YEL027W	PRO2	P54885	456 aa	Known RBP	6.23	□□□□□ -1.41
VMA3	YEL027W	MCH5	Q08777	521 aa		6.23	□□□□□ -1.41
VMA3	YEL027W	NSL1	Q12143	216 aa		6.23	□□□□□ -1.41
VMA3	YEL027W	DST1	P07273	309 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	PDC5	P16467	563 aa	Known RBP	6.22	□□□□□ -1.41
VMA3	YEL027W	TRX3	P25372	127 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	ZIP1	P31111	875 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	FUN30	P31380	1131 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	NTH1	P32356	751 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	MEI5	P32489	222 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	SFC1	P33303	322 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	KKQ8	P36004	724 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	AYR1	P40471	297 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	MEP2	P41948	499 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	PTR3	P43606	678 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	ALK1	P43633	760 aa	Known RBP	6.22	□□□□□ -1.41
VMA3	YEL027W	YNL140C	P53910	189 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	GIP3	Q03016	1276 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	MET31	Q03081	177 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	EFR3	Q03653	782 aa	Known RBP	6.22	□□□□□ -1.41
VMA3	YEL027W	SIZ1	Q04195	904 aa		6.22	□□□□□ -1.41
VMA3	YEL027W	RRN11	Q04712	507 aa		6.22	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms