RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	YBR032W	P38223	100 aa		12.15	□□□□□ -0.46
NPL3	YDR432W	UBX6	P47049	396 aa		12.15	□□□□□ -0.46
NPL3	YDR432W	LIA1	P47120	325 aa	Known RBP	12.15	□□□□□ -0.46
NPL3	YDR432W	YGL260W	P53056	76 aa		12.15	□□□□□ -0.46
NPL3	YDR432W	YNL058C	P53947	316 aa		12.15	□□□□□ -0.46
NPL3	YDR432W	TY4A-H	Q6Q5P6	413 aa		12.15	□□□□□ -0.46
NPL3	YDR432W	FAS1	P07149	2051 aa	Known RBP	12.14	□□□□□ -0.47
NPL3	YDR432W	COX1	P00401	534 aa		12.14	□□□□□ -0.47
NPL3	YDR432W	RPS21A	P0C0V8	87 aa	Known RBP	12.14	□□□□□ -0.47
NPL3	YDR432W	PHA2	P32452	334 aa		12.14	□□□□□ -0.47
NPL3	YDR432W	NUP120	P35729	1037 aa		12.14	□□□□□ -0.47
NPL3	YDR432W	CIN4	P39110	191 aa		12.14	□□□□□ -0.47
NPL3	YDR432W	APQ12	P40532	138 aa		12.14	□□□□□ -0.47
NPL3	YDR432W	YRB1	P41920	201 aa	Known RBP	12.14	□□□□□ -0.47
NPL3	YDR432W	JHD2	P47156	728 aa	Predicted RBP	12.14	□□□□□ -0.47
NPL3	YDR432W	MDM30	Q05930	598 aa		12.14	□□□□□ -0.47
NPL3	YDR432W	XYL2	Q07993	356 aa		12.14	□□□□□ -0.47
NPL3	YDR432W	APC9	Q12107	265 aa		12.14	□□□□□ -0.47
NPL3	YDR432W	RPL43A	P0CX25	92 aa	Known RBP	12.13	□□□□□ -0.47
NPL3	YDR432W	RPL43B	P0CX26	92 aa		12.13	□□□□□ -0.47
NPL3	YDR432W	KAR1	P11927	433 aa		12.13	□□□□□ -0.47
NPL3	YDR432W	ASK1	P35734	292 aa		12.13	□□□□□ -0.47
NPL3	YDR432W	PRP38	Q00723	242 aa	Predicted RBP	12.13	□□□□□ -0.47
NPL3	YDR432W	GLO4	Q12320	285 aa		12.13	□□□□□ -0.47
NPL3	YDR432W	COX6	P00427	148 aa		12.12	□□□□□ -0.47
NPL3	YDR432W	YMR085W	P0CF18	432 aa		12.12	□□□□□ -0.47
NPL3	YDR432W	SPS22	P25380	463 aa		12.12	□□□□□ -0.47
NPL3	YDR432W	YCR090C	P25654	182 aa	Known RBP	12.12	□□□□□ -0.47
NPL3	YDR432W	BUD14	P27637	709 aa		12.12	□□□□□ -0.47
NPL3	YDR432W	ORC2	P32833	620 aa		12.12	□□□□□ -0.47
NPL3	YDR432W	RRN3	P36070	627 aa		12.12	□□□□□ -0.47
NPL3	YDR432W	YDR089W	P38966	869 aa		12.12	□□□□□ -0.47
NPL3	YDR432W	EFM5	P53200	248 aa	Known RBP	12.12	□□□□□ -0.47
NPL3	YDR432W	IBD2	P53892	351 aa		12.12	□□□□□ -0.47
NPL3	YDR432W	ERG13	P54839	491 aa	Known RBP	12.12	□□□□□ -0.47
NPL3	YDR432W	YET2	Q04210	160 aa		12.12	□□□□□ -0.47
NPL3	YDR432W	HDA3	Q06623	655 aa		12.12	□□□□□ -0.47
NPL3	YDR432W	RAD34	Q06665	692 aa		12.12	□□□□□ -0.47
NPL3	YDR432W	YJU2	P28320	278 aa	Predicted RBP	12.11	□□□□□ -0.47
NPL3	YDR432W	YSC84	P32793	468 aa		12.11	□□□□□ -0.47
NPL3	YDR432W	MBP1	P39678	833 aa		12.11	□□□□□ -0.47
NPL3	YDR432W	VRG4	P40107	337 aa		12.11	□□□□□ -0.47
NPL3	YDR432W	MET12	P46151	657 aa		12.11	□□□□□ -0.47
NPL3	YDR432W	FAR3	P46671	204 aa		12.11	□□□□□ -0.47
NPL3	YDR432W	TEL2	P53038	688 aa		12.11	□□□□□ -0.47
NPL3	YDR432W	YMR155W	Q03795	547 aa		12.11	□□□□□ -0.47
NPL3	YDR432W	DFG5	Q05031	458 aa		12.11	□□□□□ -0.47
NPL3	YDR432W	AHA1	Q12449	350 aa	Known RBP	12.11	□□□□□ -0.47
NPL3	YDR432W	YPL247C	Q12523	523 aa		12.11	□□□□□ -0.47
NPL3	YDR432W	MGR1	P25573	417 aa		12.1	□□□□□ -0.47
NPL3	YDR432W	CPR3	P25719	182 aa		12.1	□□□□□ -0.47
NPL3	YDR432W	ERG1	P32476	496 aa	Known RBP	12.1	□□□□□ -0.47
NPL3	YDR432W	CDC5	P32562	705 aa		12.1	□□□□□ -0.47
NPL3	YDR432W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	12.1	□□□□□ -0.47	not detected
NPL3	YDR432W	RIM2	P38127	377 aa		12.1	□□□□□ -0.47
NPL3	YDR432W	YBR062C	P38239	180 aa		12.1	□□□□□ -0.47
NPL3	YDR432W	SEC24	P40482	926 aa	Known RBP	12.1	□□□□□ -0.47
NPL3	YDR432W	MAD2	P40958	196 aa		12.1	□□□□□ -0.47
NPL3	YDR432W	AZF1	P41696	914 aa		12.1	□□□□□ -0.47
NPL3	YDR432W	TRS85	P46944	698 aa		12.1	□□□□□ -0.47
NPL3	YDR432W	RMI1	Q02685	241 aa		12.1	□□□□□ -0.47
NPL3	YDR432W	YPL245W	Q12179	454 aa	Known RBP	12.1	□□□□□ -0.47
NPL3	YDR432W	CHA1	P25379	360 aa	Known RBP	12.09	□□□□□ -0.47
NPL3	YDR432W	APT2	P36973	181 aa		12.09	□□□□□ -0.47
NPL3	YDR432W	ASC1	P38011	319 aa	Known RBP	12.09	□□□□□ -0.47
NPL3	YDR432W	SER3	P40054	469 aa		12.09	□□□□□ -0.47
NPL3	YDR432W	CAB2	P40506	365 aa		12.09	□□□□□ -0.47
NPL3	YDR432W	IST1	P53843	298 aa	Predicted RBP	12.09	□□□□□ -0.47
NPL3	YDR432W	REH1	Q06709	432 aa		12.09	□□□□□ -0.47
NPL3	YDR432W	MMT2	Q08970	484 aa		12.09	□□□□□ -0.47
NPL3	YDR432W	AKR2	Q12013	749 aa		12.09	□□□□□ -0.47
NPL3	YDR432W	PUS9	Q12069	462 aa		12.09	□□□□□ -0.47
NPL3	YDR432W	SPE4	Q12455	300 aa		12.09	□□□□□ -0.47
NPL3	YDR432W	RPL7A	P05737	244 aa	Known RBP	12.08	□□□□□ -0.48
NPL3	YDR432W	GUK1	P15454	187 aa	Known RBP	12.08	□□□□□ -0.48
NPL3	YDR432W	RPS27A	P35997	82 aa	Known RBP	12.08	□□□□□ -0.48
NPL3	YDR432W	RMA1	P36001	430 aa	Known RBP	12.08	□□□□□ -0.48
NPL3	YDR432W	VRP1	P37370	817 aa		12.08	□□□□□ -0.48
NPL3	YDR432W	RPS27B	P38711	82 aa		12.08	□□□□□ -0.48
NPL3	YDR432W	VPS41	P38959	992 aa		12.08	□□□□□ -0.48
NPL3	YDR432W	PRP39	P39682	629 aa	Known RBP	12.08	□□□□□ -0.48
NPL3	YDR432W	YIL152W	P40455	235 aa		12.08	□□□□□ -0.48
NPL3	YDR432W	AXL1	P40851	1208 aa		12.08	□□□□□ -0.48
NPL3	YDR432W	TDA10	P42938	290 aa		12.08	□□□□□ -0.48
NPL3	YDR432W	AIF1	P52923	378 aa		12.08	□□□□□ -0.48
NPL3	YDR432W	YPL109C	Q02981	657 aa		12.08	□□□□□ -0.48
NPL3	YDR432W	GIP3	Q03016	1276 aa		12.08	□□□□□ -0.48
NPL3	YDR432W	YDR338C	Q05497	695 aa		12.08	□□□□□ -0.48
NPL3	YDR432W	YOL159C	Q08300	171 aa		12.08	□□□□□ -0.48
NPL3	YDR432W	RAX1	Q08760	435 aa		12.08	□□□□□ -0.48
NPL3	YDR432W	RPL7B	Q12213	244 aa	Known RBP	12.08	□□□□□ -0.48
NPL3	YDR432W	CDC9	P04819	755 aa		12.07	□□□□□ -0.48
NPL3	YDR432W	SPT3	P06844	337 aa		12.07	□□□□□ -0.48
NPL3	YDR432W	TAH1	P25638	111 aa	Predicted RBP	12.07	□□□□□ -0.48
NPL3	YDR432W	FAA1	P30624	700 aa	Known RBP	12.07	□□□□□ -0.48
NPL3	YDR432W	PMT2	P31382	759 aa		12.07	□□□□□ -0.48
NPL3	YDR432W	SSH4	P32343	579 aa		12.07	□□□□□ -0.48
NPL3	YDR432W	OAR1	P35731	278 aa		12.07	□□□□□ -0.48
NPL3	YDR432W	HES1	P35843	434 aa		12.07	□□□□□ -0.48
NPL3	YDR432W	PRM2	P40534	656 aa		12.07	□□□□□ -0.48

Retrieved 100 of 5,963 RNA–protein pairs in 41.9 ms