RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	RML2	P32611	393 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	CEP3	P40969	608 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	FKH2	P41813	862 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	NMD5	P46970	1048 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	FMS1	P50264	508 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	KAP114	P53067	1004 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	MPS2	P53159	387 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	SSU72	P53538	206 aa	Predicted RBP	5.78	□□□□□ -1.48
CHL4	YDR254W	RNT1	Q02555	471 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	PDS5	Q04264	1277 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	RRG8	Q06109	277 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	BSC6	Q08280	497 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	SFG1	Q12507	346 aa		5.78	□□□□□ -1.48
CHL4	YDR254W	YLL067C	Q07888	1374 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	GAL3	P13045	520 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	TIF3	P34167	436 aa	Known RBP	5.77	□□□□□ -1.49
CHL4	YDR254W	SWC5	P38326	303 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	SIC1	P38634	284 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	RFC4	P40339	323 aa	Known RBP	5.77	□□□□□ -1.49
CHL4	YDR254W	DSN1	P40568	576 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	MAF1	P41910	395 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	GSM1	P42950	618 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	YGR149W	P48236	432 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	CTR1	P49573	406 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	CUS2	P53830	285 aa	Predicted RBP	5.77	□□□□□ -1.49
CHL4	YDR254W	LEE1	Q02799	301 aa	Known RBP	5.77	□□□□□ -1.49
CHL4	YDR254W	WAR1	Q03631	944 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	ACL4	Q03771	387 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	VPS64	Q03944	604 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	ADY4	Q05955	493 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	CTS2	Q06350	511 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	YPR196W	Q06595	470 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	BTS1	Q12051	335 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	RIB2	Q12362	591 aa	Known RBP	5.77	□□□□□ -1.49
CHL4	YDR254W	MDM20	Q12387	796 aa	Known RBP	5.77	□□□□□ -1.49
CHL4	YDR254W	FMP16	Q12497	93 aa		5.77	□□□□□ -1.49
CHL4	YDR254W	COQ1	P18900	473 aa		5.76	□□□□□ -1.49
CHL4	YDR254W	ADH7	P25377	361 aa		5.76	□□□□□ -1.49
CHL4	YDR254W	CTS1	P29029	562 aa		5.76	□□□□□ -1.49
CHL4	YDR254W	SSE2	P32590	693 aa	Known RBP	5.76	□□□□□ -1.49
CHL4	YDR254W	SEC66	P33754	206 aa		5.76	□□□□□ -1.49
CHL4	YDR254W	APD1	P38281	316 aa		5.76	□□□□□ -1.49
CHL4	YDR254W	YMR262W	P38430	313 aa		5.76	□□□□□ -1.49
CHL4	YDR254W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.76	□□□□□ -1.49	not detected
CHL4	YDR254W	TMA22	P47089	198 aa	Predicted RBP	5.76	□□□□□ -1.49
CHL4	YDR254W	VOA1	P53262	265 aa		5.76	□□□□□ -1.49
CHL4	YDR254W	ZPR1	P53303	486 aa	Known RBP	5.76	□□□□□ -1.49
CHL4	YDR254W	DBP6	P53734	629 aa	Known RBP	5.76	□□□□□ -1.49
CHL4	YDR254W	DIA1	P54005	336 aa		5.76	□□□□□ -1.49
CHL4	YDR254W	INA17	Q02888	182 aa		5.76	□□□□□ -1.49
CHL4	YDR254W	RSM24	Q03976	319 aa		5.76	□□□□□ -1.49
CHL4	YDR254W	RDR1	Q08904	546 aa		5.76	□□□□□ -1.49
CHL4	YDR254W	THI21	Q08975	551 aa		5.76	□□□□□ -1.49
CHL4	YDR254W	YOR022C	Q12204	715 aa		5.76	□□□□□ -1.49
CHL4	YDR254W	RAD9	P14737	1309 aa		5.76	□□□□□ -1.49
CHL4	YDR254W	RNR2	P09938	399 aa	Known RBP	5.75	□□□□□ -1.49
CHL4	YDR254W	NHP6B	P11633	99 aa	Known RBP	5.75	□□□□□ -1.49
CHL4	YDR254W	SPO7	P18410	259 aa		5.75	□□□□□ -1.49
CHL4	YDR254W	SAG1	P20840	650 aa		5.75	□□□□□ -1.49
CHL4	YDR254W	YCP4	P25349	247 aa	Known RBP	5.75	□□□□□ -1.49
CHL4	YDR254W	RPS7A	P26786	190 aa	Known RBP	5.75	□□□□□ -1.49
CHL4	YDR254W	PSO2	P30620	661 aa		5.75	□□□□□ -1.49
CHL4	YDR254W	ATP7	P30902	174 aa		5.75	□□□□□ -1.49
CHL4	YDR254W	GCD7	P32502	381 aa	Predicted RBP	5.75	□□□□□ -1.49
CHL4	YDR254W	AGP2	P38090	596 aa		5.75	□□□□□ -1.49
CHL4	YDR254W	PPS1	P38148	807 aa		5.75	□□□□□ -1.49
CHL4	YDR254W	GIC1	P38785	314 aa		5.75	□□□□□ -1.49
CHL4	YDR254W	FAD1	P38913	306 aa		5.75	□□□□□ -1.49
CHL4	YDR254W	VFA1	P40080	203 aa		5.75	□□□□□ -1.49
CHL4	YDR254W	RIB4	P50861	169 aa	Predicted RBP	5.75	□□□□□ -1.49
CHL4	YDR254W	VAC7	P53950	1165 aa		5.75	□□□□□ -1.49
CHL4	YDR254W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
CHL4	YDR254W	ENT5	Q03769	411 aa	Known RBP	5.75	□□□□□ -1.49
CHL4	YDR254W	APC4	Q04601	652 aa		5.75	□□□□□ -1.49
CHL4	YDR254W	ARO10	Q06408	635 aa		5.75	□□□□□ -1.49
CHL4	YDR254W	FRE3	Q08905	711 aa		5.75	□□□□□ -1.49
CHL4	YDR254W	TIP41	Q12199	356 aa		5.75	□□□□□ -1.49
CHL4	YDR254W	PNS1	Q12412	539 aa		5.75	□□□□□ -1.49
CHL4	YDR254W	DCP1	Q12517	231 aa	Predicted RBP	5.75	□□□□□ -1.49
CHL4	YDR254W	TDH2	P00358	332 aa	Known RBP	5.74	□□□□□ -1.49
CHL4	YDR254W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
CHL4	YDR254W	MSF1	P08425	469 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	HMG2	P12684	1045 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	PEP5	P12868	1029 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	PBN1	P25580	416 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	YIH1	P25637	258 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	IDH2	P28241	369 aa	Known RBP	5.74	□□□□□ -1.49
CHL4	YDR254W	PET127	P32606	800 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	IMP3	P32899	183 aa	Predicted RBP	5.74	□□□□□ -1.49
CHL4	YDR254W	AIM29	P36154	155 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	CHK1	P38147	527 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	APN2	P38207	520 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	CBR1	P38626	284 aa	Known RBP	5.74	□□□□□ -1.49
CHL4	YDR254W	SEC72	P39742	193 aa	Known RBP	5.74	□□□□□ -1.49
CHL4	YDR254W	PIG2	P40187	538 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	NDC80	P40460	691 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	CIN1	P40987	1014 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	CTK2	P46962	323 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	TAH11	P47112	604 aa		5.74	□□□□□ -1.49
CHL4	YDR254W	IBA57	P47158	497 aa		5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms