RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W YPL068CQ02749 293 aa1.03□□□□□ -2.24
SCC2YDR180W PRP42Q03776 544 aaKnown RBP1.03□□□□□ -2.24
SCC2YDR180W URH1Q04179 340 aa1.03□□□□□ -2.24
SCC2YDR180W AIM32Q04689 311 aa1.03□□□□□ -2.24
SCC2YDR180W ARO10Q06408 635 aa1.03□□□□□ -2.24
SCC2YDR180W YFT2Q06676 274 aa1.03□□□□□ -2.24
SCC2YDR180W VTS1Q08831 523 aaKnown RBP RIP-Chip data1.03□□□□□ -2.24not detected
SCC2YDR180W MED2Q12124 431 aa1.03□□□□□ -2.24
SCC2YDR180W NMD4Q12129 218 aa1.03□□□□□ -2.24
SCC2YDR180W HUA2Q12134 243 aa1.03□□□□□ -2.24
SCC2YDR180W BSC1Q12140 328 aa1.03□□□□□ -2.24
SCC2YDR180W DBP10Q12389 995 aaKnown RBP1.03□□□□□ -2.24
SCC2YDR180W SKM1Q12469 655 aa1.03□□□□□ -2.24
SCC2YDR180W YLR302CO13544 120 aa1.03□□□□□ -2.24
SCC2YDR180W ARG3P05150 338 aa1.03□□□□□ -2.24
SCC2YDR180W NMT1P14743 455 aa1.03□□□□□ -2.24
SCC2YDR180W NSP1P14907 823 aaKnown RBP1.03□□□□□ -2.24
SCC2YDR180W EXO70P19658 623 aa1.03□□□□□ -2.24
SCC2YDR180W ACE2P21192 770 aa1.03□□□□□ -2.24
SCC2YDR180W YCK2P23292 546 aaKnown RBP1.03□□□□□ -2.24
SCC2YDR180W VPS3P23643 1011 aa1.03□□□□□ -2.24
SCC2YDR180W YSP3P25036 478 aa1.03□□□□□ -2.24
SCC2YDR180W ATG22P25568 528 aa1.03□□□□□ -2.24
SCC2YDR180W MIG1P27705 504 aa1.03□□□□□ -2.24
SCC2YDR180W ARP2P32381 391 aaKnown RBP1.03□□□□□ -2.24
SCC2YDR180W SCM4P32564 187 aa1.03□□□□□ -2.24
SCC2YDR180W SPS19P32573 292 aaKnown RBP1.03□□□□□ -2.24
SCC2YDR180W SMY2P32909 740 aaKnown RBP1.03□□□□□ -2.24
SCC2YDR180W VPS17P32913 551 aa1.03□□□□□ -2.24
SCC2YDR180W RMA1P36001 430 aaKnown RBP1.03□□□□□ -2.24
SCC2YDR180W NNK1P36003 928 aa1.03□□□□□ -2.24
SCC2YDR180W BMT2P38278 337 aa1.03□□□□□ -2.24
SCC2YDR180W SPT8P38915 602 aa1.03□□□□□ -2.24
SCC2YDR180W MNN9P39107 395 aaKnown RBP1.03□□□□□ -2.24
SCC2YDR180W PRE6P40303 254 aaKnown RBP1.03□□□□□ -2.24
SCC2YDR180W LTP1P40347 161 aa1.03□□□□□ -2.24
SCC2YDR180W FAF1P40546 346 aaPredicted RBP1.03□□□□□ -2.24
SCC2YDR180W SNL1P40548 159 aa1.03□□□□□ -2.24
SCC2YDR180W YIR007WP40566 764 aa1.03□□□□□ -2.24
SCC2YDR180W GTT1P40582 234 aa1.03□□□□□ -2.24
SCC2YDR180W GCD10P41814 478 aa1.03□□□□□ -2.24
SCC2YDR180W IRC5P43610 853 aa1.03□□□□□ -2.24
SCC2YDR180W SGM1P47166 707 aa1.03□□□□□ -2.24
SCC2YDR180W MNT2P53059 558 aa1.03□□□□□ -2.24
SCC2YDR180W DUO1P53168 247 aaKnown RBP1.03□□□□□ -2.24
SCC2YDR180W ART5P53244 586 aaKnown RBP1.03□□□□□ -2.24
SCC2YDR180W GTF1P53260 183 aaPredicted RBP1.03□□□□□ -2.24
SCC2YDR180W MRPS16Q02608 121 aa1.03□□□□□ -2.24
SCC2YDR180W TAF11Q04226 346 aa1.03□□□□□ -2.24
SCC2YDR180W GIS4Q04233 774 aa1.03□□□□□ -2.24
SCC2YDR180W SPH1Q06160 661 aa1.03□□□□□ -2.24
SCC2YDR180W SWA2Q06677 668 aa1.03□□□□□ -2.24
SCC2YDR180W YDL057WQ07379 328 aa1.03□□□□□ -2.24
SCC2YDR180W BRX1Q08235 291 aaKnown RBP1.03□□□□□ -2.24
SCC2YDR180W DIN7Q12086 430 aa1.03□□□□□ -2.24
SCC2YDR180W TY1A-BLQ12266 440 aa1.03□□□□□ -2.24
SCC2YDR180W RTR2Q12378 196 aa1.03□□□□□ -2.24
SCC2YDR180W RIB3Q99258 208 aa1.03□□□□□ -2.24
SCC2YDR180W STE2D6VTK4 431 aa1.03□□□□□ -2.25
SCC2YDR180W GPM1P00950 247 aaKnown RBP1.03□□□□□ -2.25
SCC2YDR180W STF1P01098 86 aa1.03□□□□□ -2.25
SCC2YDR180W CTT1P06115 562 aa1.03□□□□□ -2.25
SCC2YDR180W YFR010W-AP0C5N0 62 aa1.03□□□□□ -2.25
SCC2YDR180W MRP13P12686 339 aa1.03□□□□□ -2.25
SCC2YDR180W CBS2P14905 389 aa1.03□□□□□ -2.25
SCC2YDR180W CDC23P16522 626 aa1.03□□□□□ -2.25
SCC2YDR180W DMC1P25453 334 aa1.03□□□□□ -2.25
SCC2YDR180W MEI4P29467 408 aa1.03□□□□□ -2.25
SCC2YDR180W SIN4P32259 974 aa1.03□□□□□ -2.25
SCC2YDR180W SAC1P32368 623 aaKnown RBP1.03□□□□□ -2.25
SCC2YDR180W EMP24P32803 203 aaKnown RBP1.03□□□□□ -2.25
SCC2YDR180W RPC34P32910 317 aa1.03□□□□□ -2.25
SCC2YDR180W CBF5P33322 483 aaKnown RBP RIP-Chip data1.03□□□□□ -2.25not detected
SCC2YDR180W SHP1P34223 423 aa1.03□□□□□ -2.25
SCC2YDR180W SEF1P34228 1148 aa1.03□□□□□ -2.25
SCC2YDR180W AKL1P38080 1108 aaKnown RBP1.03□□□□□ -2.25
SCC2YDR180W MAK5P38112 773 aaPredicted RBP1.03□□□□□ -2.25
SCC2YDR180W EHT1P38295 451 aa1.03□□□□□ -2.25
SCC2YDR180W SLX1P38324 304 aa1.03□□□□□ -2.25
SCC2YDR180W VHC1P38329 1120 aa1.03□□□□□ -2.25
SCC2YDR180W PTH1P38876 190 aaKnown RBP1.03□□□□□ -2.25
SCC2YDR180W NOP16P40007 231 aaKnown RBP1.03□□□□□ -2.25
SCC2YDR180W SER33P40510 469 aa1.03□□□□□ -2.25
SCC2YDR180W GTS1P40956 396 aa1.03□□□□□ -2.25
SCC2YDR180W DIM1P41819 318 aaKnown RBP1.03□□□□□ -2.25
SCC2YDR180W FAR7P43592 221 aa1.03□□□□□ -2.25
SCC2YDR180W YJL043WP47053 257 aa1.03□□□□□ -2.25
SCC2YDR180W MRH4P53166 561 aa1.03□□□□□ -2.25
SCC2YDR180W YGR016WP53209 190 aa1.03□□□□□ -2.25
SCC2YDR180W RET3P53600 189 aa1.03□□□□□ -2.25
SCC2YDR180W ARE2P53629 642 aaKnown RBP1.03□□□□□ -2.25
SCC2YDR180W YNR071CP53757 342 aa1.03□□□□□ -2.25
SCC2YDR180W CAF40P53829 373 aa1.03□□□□□ -2.25
SCC2YDR180W IGO1P53897 168 aa1.03□□□□□ -2.25
SCC2YDR180W IMP4P53941 290 aaKnown RBP1.03□□□□□ -2.25
SCC2YDR180W MTQ1P53944 314 aa1.03□□□□□ -2.25
SCC2YDR180W YNL058CP53947 316 aa1.03□□□□□ -2.25
SCC2YDR180W SRL4Q03085 281 aa1.03□□□□□ -2.25
SCC2YDR180W GSF2Q04697 403 aaKnown RBP1.03□□□□□ -2.25
SCC2YDR180W YLR297WQ05899 129 aa1.03□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms