RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP42	YDR171W	GGA1	Q06336	557 aa		4.2	□□□□□ -1.74
HSP42	YDR171W	YLH47	Q06493	454 aa		4.2	□□□□□ -1.74
HSP42	YDR171W	PFA4	Q12006	378 aa		4.2	□□□□□ -1.74
HSP42	YDR171W	TRM8	Q12009	286 aa		4.2	□□□□□ -1.74
HSP42	YDR171W	TY2A-B	Q12260	438 aa		4.2	□□□□□ -1.74
HSP42	YDR171W	TY2A-OR2	Q12293	438 aa		4.2	□□□□□ -1.74
HSP42	YDR171W	GLE1	Q12315	538 aa		4.2	□□□□□ -1.74
HSP42	YDR171W	TY2A-DR1	Q12392	438 aa		4.2	□□□□□ -1.74
HSP42	YDR171W	TY2A-OR1	Q12439	438 aa		4.2	□□□□□ -1.74
HSP42	YDR171W	TY2A-DR3	Q99303	438 aa		4.2	□□□□□ -1.74
HSP42	YDR171W	CET1	O13297	549 aa	Predicted RBP	4.19	□□□□□ -1.74
HSP42	YDR171W	YAK1	P14680	807 aa		4.19	□□□□□ -1.74
HSP42	YDR171W	EXO70	P19658	623 aa		4.19	□□□□□ -1.74
HSP42	YDR171W	YAP1	P19880	650 aa	Known RBP	4.19	□□□□□ -1.74
HSP42	YDR171W	ISY1	P21374	235 aa	Predicted RBP	4.19	□□□□□ -1.74
HSP42	YDR171W	BUD23	P25627	275 aa	Predicted RBP	4.19	□□□□□ -1.74
HSP42	YDR171W	SAS3	P34218	831 aa		4.19	□□□□□ -1.74
HSP42	YDR171W	UTP11	P34247	250 aa	Predicted RBP	4.19	□□□□□ -1.74
HSP42	YDR171W	CSM2	P40465	213 aa		4.19	□□□□□ -1.74
HSP42	YDR171W	MSY1	P48527	492 aa		4.19	□□□□□ -1.74
HSP42	YDR171W	ASE1	P50275	885 aa		4.19	□□□□□ -1.74
HSP42	YDR171W	IDP3	P53982	420 aa	Known RBP	4.19	□□□□□ -1.74
HSP42	YDR171W	ERG13	P54839	491 aa	Known RBP	4.19	□□□□□ -1.74
HSP42	YDR171W	CIK1	Q01649	594 aa		4.19	□□□□□ -1.74
HSP42	YDR171W	ACL4	Q03771	387 aa		4.19	□□□□□ -1.74
HSP42	YDR171W	THI3	Q07471	609 aa		4.19	□□□□□ -1.74
HSP42	YDR171W	TCO89	Q08921	799 aa		4.19	□□□□□ -1.74
HSP42	YDR171W	SNF1	P06782	633 aa	Known RBP	4.18	□□□□□ -1.74
HSP42	YDR171W	YML002W	P0CF17	737 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	HEM15	P16622	393 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	CLN1	P20437	546 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	YSP3	P25036	478 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	ATO2	P32907	282 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	BUD2	P33314	1104 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	TEF4	P36008	412 aa	Known RBP	4.18	□□□□□ -1.74
HSP42	YDR171W	GEX2	P36173	615 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	VHC1	P38329	1120 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	HIS2	P38635	335 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	SPC97	P38863	823 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	UME6	P39001	836 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	END3	P39013	349 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	PCF11	P39081	626 aa	Predicted RBP	4.18	□□□□□ -1.74
HSP42	YDR171W	LTP1	P40347	161 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	DPH1	P40487	425 aa	Known RBP	4.18	□□□□□ -1.74
HSP42	YDR171W	PSA1	P41940	361 aa	Known RBP	4.18	□□□□□ -1.74
HSP42	YDR171W	STB2	P46679	850 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	IML2	P47031	731 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	LIA1	P47120	325 aa	Known RBP	4.18	□□□□□ -1.74
HSP42	YDR171W	COS5	P47187	383 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	IMD4	P50094	524 aa	Known RBP	4.18	□□□□□ -1.74
HSP42	YDR171W	PSP1	P50896	841 aa	Known RBP	4.18	□□□□□ -1.74
HSP42	YDR171W	YGL108C	P53139	140 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	USE1	P53146	245 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	CSL4	P53859	292 aa	Predicted RBP	4.18	□□□□□ -1.74
HSP42	YDR171W	CBK1	P53894	756 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	ESBP6	P53918	673 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	REG1	Q00816	1014 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	YML131W	Q03102	365 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	YMR027W	Q04371	470 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	VID22	Q05934	901 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	SWA2	Q06677	668 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	SCM3	Q12334	223 aa		4.18	□□□□□ -1.74
HSP42	YDR171W	GCN3	P14741	305 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	GUK1	P15454	187 aa	Known RBP	4.17	□□□□□ -1.74
HSP42	YDR171W	CNA1	P23287	553 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	COQ3	P27680	312 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	ITR2	P30606	609 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	MSS51	P32335	436 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	YKL050C	P35736	922 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	RRT2	P38332	387 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	MSG5	P38590	489 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	SPL2	P38839	148 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	PEX18	P38855	283 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	LAM5	P43560	674 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	NET1	P47035	1189 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	ORC5	P50874	479 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	DRN1	P53255	507 aa	Known RBP	4.17	□□□□□ -1.74
HSP42	YDR171W	LSC1	P53598	329 aa	Known RBP	4.17	□□□□□ -1.74
HSP42	YDR171W	BNI5	P53890	448 aa	Known RBP	4.17	□□□□□ -1.74
HSP42	YDR171W	TIM11	P81449	96 aa	Predicted RBP	4.17	□□□□□ -1.74
HSP42	YDR171W	STP1	Q00947	519 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	OSH6	Q02201	448 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	MUB1	Q03162	620 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	YML108W	Q03759	105 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	PLP1	Q04004	230 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	MGR3	Q04472	501 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	CSM3	Q04659	317 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	FMP42	Q04991	504 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	INM2	Q05533	292 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	YLR297W	Q05899	129 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	SNX3	Q08826	162 aa	Known RBP	4.17	□□□□□ -1.74
HSP42	YDR171W	BAG7	Q12128	409 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	CRC1	Q12289	327 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	MED1	Q12321	566 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	RAD61	Q99359	647 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	FIG2	P25653	1609 aa		4.17	□□□□□ -1.74
HSP42	YDR171W	REP1	P03871	373 aa		4.16	□□□□□ -1.74
HSP42	YDR171W	GAL4	P04386	881 aa		4.16	□□□□□ -1.74
HSP42	YDR171W	ATR1	P13090	542 aa		4.16	□□□□□ -1.74
HSP42	YDR171W	CSE1	P33307	960 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms