RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HPR1	YDR138W	DAL80	P26343	269 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	GAC1	P28006	793 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	CTS1	P29029	562 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	YDR089W	P38966	869 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	SDS3	P40505	327 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	SHE10	P53075	577 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	PKP2	P53170	491 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	ASI1	P54074	624 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	TOF2	Q02208	771 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	CWC21	Q03375	135 aa	Known RBP	4.07	□□□□□ -1.76
HPR1	YDR138W	GIS1	Q03833	894 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	RRP45	Q05636	305 aa	Known RBP	4.07	□□□□□ -1.76
HPR1	YDR138W	ATG38	Q05789	226 aa	Known RBP	4.07	□□□□□ -1.76
HPR1	YDR138W	ATG26	Q06321	1198 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	AIM39	Q08223	395 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	APL4	Q12028	832 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	RTC5	Q12108	567 aa	Known RBP	4.07	□□□□□ -1.76
HPR1	YDR138W	HER1	Q12276	1246 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	NDJ1	Q12366	352 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	NUP1	P20676	1076 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	MRPL4	P36517	319 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	ICS2	P38284	255 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	YHR210C	P38893	341 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	HXT9	P40885	567 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	PTR3	P43606	678 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	LYS20	P48570	428 aa	Known RBP	4.07	□□□□□ -1.76
HPR1	YDR138W	YGR127W	P53275	312 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	EAF7	P53911	425 aa	Known RBP	4.07	□□□□□ -1.76
HPR1	YDR138W	YNL050C	P53952	270 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	HEF3	P53978	1044 aa	Known RBP	4.07	□□□□□ -1.76
HPR1	YDR138W	RBA50	Q04418	439 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	NDL1	Q06568	189 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	YDL057W	Q07379	328 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	MLH2	Q07980	695 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	RKM1	Q08961	583 aa	Predicted RBP	4.07	□□□□□ -1.76
HPR1	YDR138W	SUT2	Q12286	268 aa		4.07	□□□□□ -1.76
HPR1	YDR138W	RAD52	P06778	471 aa	Known RBP	4.06	□□□□□ -1.76
HPR1	YDR138W	PUT2	P07275	575 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	AQY1	P0CD91	305 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	EFB1	P32471	206 aa	Known RBP	4.06	□□□□□ -1.76
HPR1	YDR138W	YBR139W	P38109	508 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	YBL028C	P38202	106 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	TCM62	P38228	572 aa	Known RBP	4.06	□□□□□ -1.76
HPR1	YDR138W	HSM3	P38348	480 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	TIF4631	P39935	952 aa	Known RBP	4.06	□□□□□ -1.76
HPR1	YDR138W	LAM5	P43560	674 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	HST1	P53685	503 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	ADA2	Q02336	434 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	YMR178W	Q03219	274 aa	Known RBP	4.06	□□□□□ -1.76
HPR1	YDR138W	STE3	P06783	470 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	SCH9	P11792	824 aa	Known RBP	4.06	□□□□□ -1.76
HPR1	YDR138W	YMC1	P32331	307 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	NIP1	P32497	812 aa	Known RBP	4.06	□□□□□ -1.76
HPR1	YDR138W	YHL017W	P38745	532 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	UBA4	P38820	440 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	PEX18	P38855	283 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	CIN4	P39110	191 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	BUD32	P53323	261 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	YMR130W	Q04223	302 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	EMI2	Q04409	500 aa	Known RBP	4.06	□□□□□ -1.76
HPR1	YDR138W	MGR3	Q04472	501 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	DIS3	Q08162	1001 aa	Known RBP	4.06	□□□□□ -1.76
HPR1	YDR138W	YOR365C	Q08844	703 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	AEP3	Q12089	606 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	YOR012W	Q12351	137 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	YBL111C	Q3E7Y5	667 aa		4.06	□□□□□ -1.76
HPR1	YDR138W	CAR1	P00812	333 aa	Known RBP	4.05	□□□□□ -1.76
HPR1	YDR138W	RAP1	P11938	827 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	RPS2	P25443	254 aa	Known RBP	4.05	□□□□□ -1.76
HPR1	YDR138W	PHO91	P27514	894 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	SIN4	P32259	974 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	SRB2	P34162	210 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	CCT2	P39076	527 aa	Known RBP	4.05	□□□□□ -1.76
HPR1	YDR138W	YTA12	P40341	825 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	YIL060W	P40519	144 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	SYG1	P40528	902 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	AQR1	P53943	586 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	PFA5	Q03289	374 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	RPN9	Q04062	393 aa	Known RBP	4.05	□□□□□ -1.76
HPR1	YDR138W	MSC3	Q05812	728 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	DCS1	Q06151	350 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	ECM30	Q06673	1274 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	THI3	Q07471	609 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	SLK19	Q08581	821 aa	Known RBP	4.05	□□□□□ -1.76
HPR1	YDR138W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.05	□□□□□ -1.76
HPR1	YDR138W	TAL1	P15019	335 aa	Known RBP	4.05	□□□□□ -1.76
HPR1	YDR138W	OM45	P16547	393 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	PPZ1	P26570	692 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	WSS1	P38838	269 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	GPI16	P38875	610 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	CIN1	P40987	1014 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	ALK1	P43633	760 aa	Known RBP	4.05	□□□□□ -1.76
HPR1	YDR138W	EFM5	P53200	248 aa	Known RBP	4.05	□□□□□ -1.76
HPR1	YDR138W	RTC4	P53850	401 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	VPS20	Q04272	221 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	POS5	Q06892	414 aa		4.05	□□□□□ -1.76
HPR1	YDR138W	YMR084W	A2P2R3	262 aa		4.04	□□□□□ -1.76
HPR1	YDR138W	ATP10	P18496	279 aa		4.04	□□□□□ -1.76
HPR1	YDR138W	FAR1	P21268	830 aa		4.04	□□□□□ -1.76
HPR1	YDR138W	RAD14	P28519	371 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms