RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W LSB3P43603 459 aaKnown RBP9.24□□□□□ -0.93
SED1YDR077W NUP85P46673 744 aa9.24□□□□□ -0.93
SED1YDR077W CAF120P53836 1060 aa9.24□□□□□ -0.93
SED1YDR077W YNL140CP53910 189 aa9.24□□□□□ -0.93
SED1YDR077W GIP3Q03016 1276 aa9.24□□□□□ -0.93
SED1YDR077W MET31Q03081 177 aa9.24□□□□□ -0.93
SED1YDR077W RAD33Q04231 177 aa9.24□□□□□ -0.93
SED1YDR077W YMR034CQ05131 434 aaPredicted RBP9.24□□□□□ -0.93
SED1YDR077W YHC1Q05900 231 aaKnown RBP9.24□□□□□ -0.93
SED1YDR077W RGT2Q12300 763 aa9.24□□□□□ -0.93
SED1YDR077W INH1P01097 85 aa9.23□□□□□ -0.93
SED1YDR077W ATP4P05626 244 aa9.23□□□□□ -0.93
SED1YDR077W SPT15P13393 240 aaKnown RBP9.23□□□□□ -0.93
SED1YDR077W SGV1P23293 657 aaKnown RBP9.23□□□□□ -0.93
SED1YDR077W HXT4P32467 576 aa9.23□□□□□ -0.93
SED1YDR077W MRP8P35719 219 aa9.23□□□□□ -0.93
SED1YDR077W DEF1P35732 738 aaKnown RBP9.23□□□□□ -0.93
SED1YDR077W GLG1P36143 616 aa9.23□□□□□ -0.93
SED1YDR077W YKR078WP36158 585 aaKnown RBP9.23□□□□□ -0.93
SED1YDR077W HXT6P39003 570 aaKnown RBP9.23□□□□□ -0.93
SED1YDR077W HXT7P39004 570 aa9.23□□□□□ -0.93
SED1YDR077W CAB2P40506 365 aa9.23□□□□□ -0.93
SED1YDR077W GCV1P48015 400 aa9.23□□□□□ -0.93
SED1YDR077W MPS1P54199 764 aa9.23□□□□□ -0.93
SED1YDR077W SDH1Q00711 640 aa9.23□□□□□ -0.93
SED1YDR077W YMR010WQ03687 405 aa9.23□□□□□ -0.93
SED1YDR077W RPN6Q12377 434 aa9.23□□□□□ -0.93
SED1YDR077W BCY1P07278 416 aaKnown RBP9.22□□□□□ -0.93
SED1YDR077W CLB3P24870 427 aa9.22□□□□□ -0.93
SED1YDR077W FUN30P31380 1131 aa9.22□□□□□ -0.93
SED1YDR077W ATO2P32907 282 aa9.22□□□□□ -0.93
SED1YDR077W VPS21P36017 210 aaKnown RBP9.22□□□□□ -0.93
SED1YDR077W HXT5P38695 592 aa9.22□□□□□ -0.93
SED1YDR077W YPT35P38815 214 aaKnown RBP9.22□□□□□ -0.93
SED1YDR077W FAD1P38913 306 aa9.22□□□□□ -0.93
SED1YDR077W FAA2P39518 744 aa9.22□□□□□ -0.93
SED1YDR077W RGI1P40043 161 aaPredicted RBP9.22□□□□□ -0.93
SED1YDR077W COS12P53053 380 aa9.22□□□□□ -0.93
SED1YDR077W AAT1Q01802 451 aa9.22□□□□□ -0.93
SED1YDR077W SMA1Q02651 245 aa9.22□□□□□ -0.93
SED1YDR077W YPL113CQ02961 396 aa9.22□□□□□ -0.93
SED1YDR077W MEU1Q07938 337 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
SED1YDR077W PLB3Q08108 686 aa9.22□□□□□ -0.93
SED1YDR077W YLL054CQ12244 843 aa9.22□□□□□ -0.93
SED1YDR077W RPN5Q12250 445 aaKnown RBP9.22□□□□□ -0.93
SED1YDR077W MHT1Q12525 324 aa9.22□□□□□ -0.93
SED1YDR077W YKL018C-AQ3E7A7 99 aa9.22□□□□□ -0.93
SED1YDR077W URA4P20051 364 aa9.21□□□□□ -0.94
SED1YDR077W RPT5P33297 434 aaKnown RBP9.21□□□□□ -0.94
SED1YDR077W YBR071WP38243 211 aa9.21□□□□□ -0.94
SED1YDR077W YJL070CP40361 888 aa9.21□□□□□ -0.94
SED1YDR077W GVP36P40531 326 aaKnown RBP9.21□□□□□ -0.94
SED1YDR077W GAB1P41733 394 aa9.21□□□□□ -0.94
SED1YDR077W FMP32P43557 207 aa9.21□□□□□ -0.94
SED1YDR077W AIM22P47051 409 aa9.21□□□□□ -0.94
SED1YDR077W VMA10P48836 114 aaKnown RBP9.21□□□□□ -0.94
SED1YDR077W KEL2P50090 882 aa9.21□□□□□ -0.94
SED1YDR077W SNO2P53823 222 aa9.21□□□□□ -0.94
SED1YDR077W DSL1P53847 754 aa9.21□□□□□ -0.94
SED1YDR077W UGO1Q03327 502 aa9.21□□□□□ -0.94
SED1YDR077W HPF1Q05164 967 aa9.21□□□□□ -0.94
SED1YDR077W YLL032CQ07834 825 aaKnown RBP RIP-Chip data9.21□□□□□ -0.94not detected
SED1YDR077W YOL159CQ08300 171 aa9.21□□□□□ -0.94
SED1YDR077W CBP2P03874 630 aaPredicted RBP9.2□□□□□ -0.94
SED1YDR077W KAR1P11927 433 aa9.2□□□□□ -0.94
SED1YDR077W STE6P12866 1290 aa9.2□□□□□ -0.94
SED1YDR077W UGA1P17649 471 aa9.2□□□□□ -0.94
SED1YDR077W RDS2P19541 446 aaKnown RBP9.2□□□□□ -0.94
SED1YDR077W PRI2P20457 528 aa9.2□□□□□ -0.94
SED1YDR077W CLB4P24871 460 aa9.2□□□□□ -0.94
SED1YDR077W CDC5P32562 705 aa9.2□□□□□ -0.94
SED1YDR077W MGM101P32787 269 aaKnown RBP9.2□□□□□ -0.94
SED1YDR077W BIO5P53744 561 aaKnown RBP9.2□□□□□ -0.94
SED1YDR077W YNL095CP53932 642 aa9.2□□□□□ -0.94
SED1YDR077W YLL007CQ07799 665 aa9.2□□□□□ -0.94
SED1YDR077W SAM4Q08985 325 aaKnown RBP9.2□□□□□ -0.94
SED1YDR077W NMD4Q12129 218 aa9.2□□□□□ -0.94
SED1YDR077W SUL2Q12325 893 aa9.2□□□□□ -0.94
SED1YDR077W NAG1Q8TGN9 163 aa9.2□□□□□ -0.94
SED1YDR077W SPB1P25582 841 aaPredicted RBP9.19□□□□□ -0.94
SED1YDR077W UGP1P32861 499 aaKnown RBP9.19□□□□□ -0.94
SED1YDR077W RRP3P38712 501 aaKnown RBP9.19□□□□□ -0.94
SED1YDR077W DMA1P38823 416 aa9.19□□□□□ -0.94
SED1YDR077W ECM10P39987 644 aa9.19□□□□□ -0.94
SED1YDR077W BSC2Q05611 235 aa9.19□□□□□ -0.94
SED1YDR077W SSQ1Q05931 657 aaPredicted RBP9.19□□□□□ -0.94
SED1YDR077W NTO1Q12311 748 aa9.19□□□□□ -0.94
SED1YDR077W PSY3Q12318 242 aa9.19□□□□□ -0.94
SED1YDR077W SNF8Q12483 233 aa9.19□□□□□ -0.94
SED1YDR077W MEX67Q99257 599 aaKnown RBP9.19□□□□□ -0.94
SED1YDR077W TY4B-PA0A0B7P3V8 1104 aa9.18□□□□□ -0.94
SED1YDR077W MDM35O60200 86 aa9.18□□□□□ -0.94
SED1YDR077W RAP1P11938 827 aa9.18□□□□□ -0.94
SED1YDR077W SEC17P32602 292 aa9.18□□□□□ -0.94
SED1YDR077W EMC3P36039 253 aa9.18□□□□□ -0.94
SED1YDR077W SKG1P36169 355 aa9.18□□□□□ -0.94
SED1YDR077W YBR241CP38142 488 aa9.18□□□□□ -0.94
SED1YDR077W SLM4P38247 162 aa9.18□□□□□ -0.94
SED1YDR077W COS111P38308 924 aa9.18□□□□□ -0.94
SED1YDR077W DED81P38707 554 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms