RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W YEL020CP39994 560 aa6.83□□□□□ -1.32
NUP84YDL116W AIM23P47015 356 aa6.83□□□□□ -1.32
NUP84YDL116W SUT1P53032 299 aaKnown RBP6.83□□□□□ -1.32
NUP84YDL116W PEX13P80667 386 aa6.83□□□□□ -1.32
NUP84YDL116W NUP49Q02199 472 aa6.83□□□□□ -1.32
NUP84YDL116W YML131WQ03102 365 aa6.83□□□□□ -1.32
NUP84YDL116W MUS81Q04149 632 aaPredicted RBP6.83□□□□□ -1.32
NUP84YDL116W OPI10Q08202 246 aa6.83□□□□□ -1.32
NUP84YDL116W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
NUP84YDL116W PGC1Q08959 321 aa6.83□□□□□ -1.32
NUP84YDL116W ATG29Q12092 213 aa6.83□□□□□ -1.32
NUP84YDL116W UBR1P19812 1950 aa6.83□□□□□ -1.32
NUP84YDL116W GPM1P00950 247 aaKnown RBP6.82□□□□□ -1.32
NUP84YDL116W HEM2P05373 342 aa6.82□□□□□ -1.32
NUP84YDL116W CDC31P06704 161 aaKnown RBP6.82□□□□□ -1.32
NUP84YDL116W RSA4P25382 515 aaKnown RBP6.82□□□□□ -1.32
NUP84YDL116W ECM13P38195 257 aa6.82□□□□□ -1.32
NUP84YDL116W ISM1P48526 1002 aa6.82□□□□□ -1.32
NUP84YDL116W DIA3P52290 468 aa6.82□□□□□ -1.32
NUP84YDL116W TYW3P53177 273 aa6.82□□□□□ -1.32
NUP84YDL116W CDC14Q00684 551 aa6.82□□□□□ -1.32
NUP84YDL116W UGO1Q03327 502 aa6.82□□□□□ -1.32
NUP84YDL116W ENT5Q03769 411 aaKnown RBP6.82□□□□□ -1.32
NUP84YDL116W SPO20Q04359 397 aa6.82□□□□□ -1.32
NUP84YDL116W URC2Q04411 772 aa6.82□□□□□ -1.32
NUP84YDL116W YMR111CQ04461 462 aaPredicted RBP6.82□□□□□ -1.32
NUP84YDL116W HBT1Q07653 1046 aaKnown RBP6.82□□□□□ -1.32
NUP84YDL116W BUD7Q08754 746 aa6.82□□□□□ -1.32
NUP84YDL116W RBD2Q12270 262 aa6.82□□□□□ -1.32
NUP84YDL116W ICT1Q12385 394 aa6.82□□□□□ -1.32
NUP84YDL116W HXK2P04807 486 aaKnown RBP6.82□□□□□ -1.32
NUP84YDL116W PRP21P32524 280 aaPredicted RBP6.82□□□□□ -1.32
NUP84YDL116W YBR241CP38142 488 aa6.82□□□□□ -1.32
NUP84YDL116W YHR202WP38887 602 aa6.82□□□□□ -1.32
NUP84YDL116W GDI1P39958 451 aaKnown RBP6.82□□□□□ -1.32
NUP84YDL116W ELO3P40319 345 aa6.82□□□□□ -1.32
NUP84YDL116W PET117Q02771 107 aa6.82□□□□□ -1.32
NUP84YDL116W JIP4Q03361 876 aa6.82□□□□□ -1.32
NUP84YDL116W BLS1Q06071 122 aa6.82□□□□□ -1.32
NUP84YDL116W GGA1Q06336 557 aa6.82□□□□□ -1.32
NUP84YDL116W WTM1Q12363 437 aaKnown RBP6.82□□□□□ -1.32
NUP84YDL116W TY1A-DR4O74302 440 aa6.81□□□□□ -1.32
NUP84YDL116W TY1A-HP0C2I4 478 aaKnown RBP6.81□□□□□ -1.32
NUP84YDL116W TY1A-AP0CX57 440 aa6.81□□□□□ -1.32
NUP84YDL116W TY1A-PR1P0CX58 440 aa6.81□□□□□ -1.32
NUP84YDL116W TY1A-ORP0CX59 440 aa6.81□□□□□ -1.32
NUP84YDL116W TY1A-PR2P0CX60 440 aa6.81□□□□□ -1.32
NUP84YDL116W TY1A-DR5P0CX65 440 aa6.81□□□□□ -1.32
NUP84YDL116W TY1A-ER2P0CX66 440 aa6.81□□□□□ -1.32
NUP84YDL116W TY1A-GR3P0CX67 440 aa6.81□□□□□ -1.32
NUP84YDL116W TY1A-LR1P0CX68 440 aa6.81□□□□□ -1.32
NUP84YDL116W TY1A-MR2P0CX69 440 aa6.81□□□□□ -1.32
NUP84YDL116W DCC1P25559 380 aa6.81□□□□□ -1.32
NUP84YDL116W MSS51P32335 436 aa6.81□□□□□ -1.32
NUP84YDL116W YHR033WP38690 423 aa6.81□□□□□ -1.32
NUP84YDL116W SFB3P38810 929 aa6.81□□□□□ -1.32
NUP84YDL116W FET5P43561 622 aa6.81□□□□□ -1.32
NUP84YDL116W CAK1P43568 368 aaPredicted RBP6.81□□□□□ -1.32
NUP84YDL116W TY1A-JR2P47099 440 aa6.81□□□□□ -1.32
NUP84YDL116W DAM1P53267 343 aa6.81□□□□□ -1.32
NUP84YDL116W TY1A-DR1Q03856 440 aa6.81□□□□□ -1.32
NUP84YDL116W ARP10Q04549 284 aa6.81□□□□□ -1.32
NUP84YDL116W TY1A-ML1Q04706 440 aaKnown RBP6.81□□□□□ -1.32
NUP84YDL116W TY1A-BRQ12217 440 aa6.81□□□□□ -1.32
NUP84YDL116W TY1A-NL2Q12470 440 aa6.81□□□□□ -1.32
NUP84YDL116W TY1A-GR2Q12485 440 aa6.81□□□□□ -1.32
NUP84YDL116W YOL159C-AQ3E769 90 aa6.81□□□□□ -1.32
NUP84YDL116W ATP1P07251 545 aaKnown RBP6.81□□□□□ -1.32
NUP84YDL116W SEC2P17065 759 aa6.81□□□□□ -1.32
NUP84YDL116W COX13P32799 129 aa6.81□□□□□ -1.32
NUP84YDL116W DHR2P36009 735 aaPredicted RBP6.81□□□□□ -1.32
NUP84YDL116W POL12P38121 705 aaPredicted RBP6.81□□□□□ -1.32
NUP84YDL116W GPX2P38143 162 aa6.81□□□□□ -1.32
NUP84YDL116W YHL012WP38709 493 aa6.81□□□□□ -1.32
NUP84YDL116W RPS12P48589 143 aaKnown RBP6.81□□□□□ -1.32
NUP84YDL116W BRE5P53741 515 aaKnown RBP6.81□□□□□ -1.32
NUP84YDL116W CAF120P53836 1060 aa6.81□□□□□ -1.32
NUP84YDL116W YPL107WQ02873 248 aa6.81□□□□□ -1.32
NUP84YDL116W BSC2Q05611 235 aa6.81□□□□□ -1.32
NUP84YDL116W MHF1Q3E835 90 aa6.81□□□□□ -1.32
NUP84YDL116W GPH1P06738 902 aaKnown RBP6.8□□□□□ -1.32
NUP84YDL116W SWI5P08153 709 aa6.8□□□□□ -1.32
NUP84YDL116W MET2P08465 486 aa6.8□□□□□ -1.32
NUP84YDL116W TOP3P13099 656 aa6.8□□□□□ -1.32
NUP84YDL116W DUT1P33317 147 aa6.8□□□□□ -1.32
NUP84YDL116W ARN2P38724 620 aa6.8□□□□□ -1.32
NUP84YDL116W CEM1P39525 442 aa6.8□□□□□ -1.32
NUP84YDL116W ACO2P39533 789 aa6.8□□□□□ -1.32
NUP84YDL116W HAT2P39984 401 aa6.8□□□□□ -1.32
NUP84YDL116W GYP8P43570 497 aa6.8□□□□□ -1.32
NUP84YDL116W MDE1P47095 244 aa6.8□□□□□ -1.32
NUP84YDL116W YGR266WP53326 701 aa6.8□□□□□ -1.32
NUP84YDL116W CPR8P53728 308 aa6.8□□□□□ -1.32
NUP84YDL116W DBP6P53734 629 aaKnown RBP6.8□□□□□ -1.32
NUP84YDL116W MTD1Q02046 320 aaKnown RBP6.8□□□□□ -1.32
NUP84YDL116W SWP1Q02795 286 aa6.8□□□□□ -1.32
NUP84YDL116W ACF2Q12168 779 aa6.8□□□□□ -1.32
NUP84YDL116W HSP42Q12329 375 aa6.8□□□□□ -1.32
NUP84YDL116W PST2Q12335 198 aaKnown RBP6.8□□□□□ -1.32
NUP84YDL116W MHF2Q3E829 80 aa6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms