RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	BUD32	P53323	261 aa		5.71	□□□□□ -1.5
SIR2	YDL042C	RSF1	Q05043	376 aa		5.71	□□□□□ -1.5
SIR2	YDL042C	YMR034C	Q05131	434 aa	Predicted RBP	5.71	□□□□□ -1.5
SIR2	YDL042C	YOL159C-A	Q3E769	90 aa		5.71	□□□□□ -1.5
SIR2	YDL042C	YML133C	Q03099	1374 aa		5.7	□□□□□ -1.5
SIR2	YDL042C	YLL067C	Q07888	1374 aa		5.7	□□□□□ -1.5
SIR2	YDL042C	YLL066C	Q99208	1374 aa		5.7	□□□□□ -1.5
SIR2	YDL042C	SHP1	P34223	423 aa		5.7	□□□□□ -1.5
SIR2	YDL042C	LSM5	P40089	93 aa	Known RBP	5.7	□□□□□ -1.5
SIR2	YDL042C	AIM22	P47051	409 aa		5.7	□□□□□ -1.5
SIR2	YDL042C	SNA4	Q07549	140 aa		5.7	□□□□□ -1.5
SIR2	YDL042C	THP1	Q08231	455 aa		5.7	□□□□□ -1.5
SIR2	YDL042C	RPS2	P25443	254 aa	Known RBP	5.69	□□□□□ -1.5
SIR2	YDL042C	RHO4	Q00246	291 aa		5.69	□□□□□ -1.5
SIR2	YDL042C	SMA1	Q02651	245 aa		5.69	□□□□□ -1.5
SIR2	YDL042C	DIC1	Q06143	298 aa		5.69	□□□□□ -1.5
SIR2	YDL042C	YOR365C	Q08844	703 aa		5.69	□□□□□ -1.5
SIR2	YDL042C	APL5	Q08951	932 aa	Known RBP	5.69	□□□□□ -1.5
SIR2	YDL042C	BSC1	Q12140	328 aa		5.69	□□□□□ -1.5
SIR2	YDL042C	ARP6	Q12509	438 aa		5.69	□□□□□ -1.5
SIR2	YDL042C	SRB8	P25648	1427 aa		5.69	□□□□□ -1.5
SIR2	YDL042C	PRP2	P20095	876 aa	Predicted RBP	5.69	□□□□□ -1.5
SIR2	YDL042C	CLB3	P24870	427 aa		5.69	□□□□□ -1.5
SIR2	YDL042C	SAS3	P34218	831 aa		5.69	□□□□□ -1.5
SIR2	YDL042C	YJR154W	P47181	346 aa		5.69	□□□□□ -1.5
SIR2	YDL042C	RAD52	P06778	471 aa	Known RBP	5.68	□□□□□ -1.5
SIR2	YDL042C	RPL31B	P0C2H9	113 aa	Known RBP	5.68	□□□□□ -1.5
SIR2	YDL042C	PMS1	P14242	873 aa		5.68	□□□□□ -1.5
SIR2	YDL042C	SGV1	P23293	657 aa	Known RBP	5.68	□□□□□ -1.5
SIR2	YDL042C	EFM2	P38347	419 aa		5.68	□□□□□ -1.5
SIR2	YDL042C	MBB1	P39534	108 aa		5.68	□□□□□ -1.5
SIR2	YDL042C	AXL1	P40851	1208 aa		5.68	□□□□□ -1.5
SIR2	YDL042C	DRN1	P53255	507 aa	Known RBP	5.68	□□□□□ -1.5
SIR2	YDL042C	YGR250C	P53316	781 aa	Known RBP	5.68	□□□□□ -1.5
SIR2	YDL042C	DIG1	Q03063	452 aa	Known RBP	5.68	□□□□□ -1.5
SIR2	YDL042C	YDR415C	Q04033	374 aa	Predicted RBP	5.68	□□□□□ -1.5
SIR2	YDL042C	DNF3	Q12674	1656 aa		5.67	□□□□□ -1.5
SIR2	YDL042C	COR1	P07256	457 aa		5.67	□□□□□ -1.5
SIR2	YDL042C	SPC34	P36131	295 aa		5.67	□□□□□ -1.5
SIR2	YDL042C	BNA4	P38169	460 aa		5.67	□□□□□ -1.5
SIR2	YDL042C	TCM62	P38228	572 aa	Known RBP	5.67	□□□□□ -1.5
SIR2	YDL042C	ARC40	P38328	384 aa	Known RBP	5.67	□□□□□ -1.5
SIR2	YDL042C	HEF3	P53978	1044 aa	Known RBP	5.67	□□□□□ -1.5
SIR2	YDL042C	GIR2	Q03768	265 aa	Predicted RBP	5.67	□□□□□ -1.5
SIR2	YDL042C	MIC60	P36112	540 aa		5.66	□□□□□ -1.5
SIR2	YDL042C	TIF4631	P39935	952 aa	Known RBP	5.66	□□□□□ -1.5
SIR2	YDL042C	MPS1	P54199	764 aa		5.66	□□□□□ -1.5
SIR2	YDL042C	YLR352W	Q06479	807 aa		5.66	□□□□□ -1.5
SIR2	YDL042C	SRL1	Q08673	210 aa		5.66	□□□□□ -1.5
SIR2	YDL042C	PDH1	Q12428	516 aa	Known RBP	5.66	□□□□□ -1.5
SIR2	YDL042C	TYR1	P20049	452 aa		5.66	□□□□□ -1.5
SIR2	YDL042C	RAD24	P32641	659 aa		5.66	□□□□□ -1.5
SIR2	YDL042C	ALT2	P52892	507 aa		5.66	□□□□□ -1.5
SIR2	YDL042C	YPL068C	Q02749	293 aa		5.66	□□□□□ -1.5
SIR2	YDL042C	MSS11	Q03825	758 aa		5.66	□□□□□ -1.5
SIR2	YDL042C	GLO2	Q05584	274 aa		5.66	□□□□□ -1.5
SIR2	YDL042C	FMP45	Q07651	309 aa		5.66	□□□□□ -1.5
SIR2	YDL042C	RAV1	P47104	1357 aa		5.65	□□□□□ -1.5
SIR2	YDL042C	YCR043C	P25361	127 aa		5.65	□□□□□ -1.51
SIR2	YDL042C	YAP3	P38749	330 aa		5.65	□□□□□ -1.51
SIR2	YDL042C	YIL169C	P40442	995 aa		5.65	□□□□□ -1.51
SIR2	YDL042C	ATG27	P46989	271 aa		5.65	□□□□□ -1.51
SIR2	YDL042C	ZPR1	P53303	486 aa	Known RBP	5.65	□□□□□ -1.51
SIR2	YDL042C	TAP42	Q04372	366 aa		5.65	□□□□□ -1.51
SIR2	YDL042C	YLR281C	Q05863	155 aa		5.65	□□□□□ -1.51
SIR2	YDL042C	BRR1	Q99177	341 aa	Predicted RBP	5.65	□□□□□ -1.51
SIR2	YDL042C	RPL3	P14126	387 aa	Known RBP	5.64	□□□□□ -1.51
SIR2	YDL042C	HNM1	P19807	563 aa		5.64	□□□□□ -1.51
SIR2	YDL042C	MET30	P39014	640 aa		5.64	□□□□□ -1.51
SIR2	YDL042C	YER130C	P39959	443 aa		5.64	□□□□□ -1.51
SIR2	YDL042C	TDA7	P53882	636 aa	Predicted RBP	5.64	□□□□□ -1.51
SIR2	YDL042C	SAM50	P53969	484 aa		5.64	□□□□□ -1.51
SIR2	YDL042C	RPA49	Q01080	415 aa	Predicted RBP	5.64	□□□□□ -1.51
SIR2	YDL042C	RBS1	Q05672	457 aa	Known RBP	5.64	□□□□□ -1.51
SIR2	YDL042C	VTA1	Q06263	330 aa		5.64	□□□□□ -1.51
SIR2	YDL042C	ICT1	Q12385	394 aa		5.64	□□□□□ -1.51
SIR2	YDL042C	RPC53	P25441	422 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	ACH1	P32316	526 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	RPN2	P32565	945 aa	Known RBP	5.63	□□□□□ -1.51
SIR2	YDL042C	MSN2	P33748	704 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	DUG2	P38149	878 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	RKM3	P38222	552 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	YIR014W	P40570	242 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	AZF1	P41696	914 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	TES1	P41903	349 aa	Known RBP	5.63	□□□□□ -1.51
SIR2	YDL042C	YGL082W	P53155	381 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	SEC5	P89102	971 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	IKI3	Q06706	1349 aa	Known RBP	5.63	□□□□□ -1.51
SIR2	YDL042C	BAR1	P12630	587 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	PDX1	P16451	410 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	HXT3	P32466	567 aa	Known RBP	5.63	□□□□□ -1.51
SIR2	YDL042C	VPS17	P32913	551 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	RRP3	P38712	501 aa	Known RBP	5.63	□□□□□ -1.51
SIR2	YDL042C	GUF1	P46943	645 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	SLG1	P54867	378 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	FMP42	Q04991	504 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	THI20	Q08224	551 aa		5.63	□□□□□ -1.51
SIR2	YDL042C	HAP1	P0CE41	1502 aa		5.62	□□□□□ -1.51
SIR2	YDL042C	SUC2	P00724	532 aa		5.62	□□□□□ -1.51
SIR2	YDL042C	BUD14	P27637	709 aa		5.62	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms