RNA–Protein interactions for RNA: YBR295W

PCA1, Transcript of Cadmium transporting P-type ATPase, yeast

Gene PCA1, Length 3,651 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCA1	YBR295W	YML037C	Q03703	340 aa		4.58	□□□□□ -1.68
PCA1	YBR295W	CIA1	Q05583	330 aa		4.58	□□□□□ -1.68
PCA1	YBR295W	REX4	Q08237	289 aa		4.58	□□□□□ -1.68
PCA1	YBR295W	RIM20	Q12033	661 aa		4.58	□□□□□ -1.68
PCA1	YBR295W	YPL150W	Q12152	901 aa		4.58	□□□□□ -1.68
PCA1	YBR295W	YOR012W	Q12351	137 aa		4.58	□□□□□ -1.68
PCA1	YBR295W	TOP3	P13099	656 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	SLY1	P22213	666 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	DBP2	P24783	546 aa	Known RBP	4.57	□□□□□ -1.68
PCA1	YBR295W	HYM1	P32464	399 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	LIP5	P32875	414 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	CTF13	P35203	478 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	SET5	P38890	526 aa	Known RBP	4.57	□□□□□ -1.68
PCA1	YBR295W	GPB2	P39717	880 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	PFK26	P40433	827 aa	Known RBP	4.57	□□□□□ -1.68
PCA1	YBR295W	MRX5	P47007	382 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	YGR250C	P53316	781 aa	Known RBP	4.57	□□□□□ -1.68
PCA1	YBR295W	HCH1	P53834	153 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	ALD6	P54115	500 aa	Known RBP	4.57	□□□□□ -1.68
PCA1	YBR295W	RPT6	Q01939	405 aa	Known RBP	4.57	□□□□□ -1.68
PCA1	YBR295W	YMR209C	Q03648	457 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	ENT5	Q03769	411 aa	Known RBP	4.57	□□□□□ -1.68
PCA1	YBR295W	ISR1	Q06098	443 aa	Known RBP	4.57	□□□□□ -1.68
PCA1	YBR295W	YLR179C	Q06252	201 aa	Known RBP	4.57	□□□□□ -1.68
PCA1	YBR295W	RFU1	Q08003	200 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	YOR365C	Q08844	703 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	LEU9	Q12166	604 aa	Known RBP	4.57	□□□□□ -1.68
PCA1	YBR295W	HER1	Q12276	1246 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	YDR061W	Q12298	539 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	AGC1	Q12482	902 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	YOR111W	Q99210	232 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	RAD10	P06838	210 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	ERG11	P10614	530 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	RPL4A	P10664	362 aa	Known RBP	4.57	□□□□□ -1.68
PCA1	YBR295W	RPI1	P23250	407 aa	Known RBP	4.57	□□□□□ -1.68
PCA1	YBR295W	NDC1	P32500	655 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	BET3	P36149	193 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	SCC4	P40090	624 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	ASK10	P48361	1146 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	RPL4B	P49626	362 aa	Known RBP	4.57	□□□□□ -1.68
PCA1	YBR295W	GTF1	P53260	183 aa	Predicted RBP	4.57	□□□□□ -1.68
PCA1	YBR295W	ATF2	P53296	535 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	SLI1	P53304	468 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
PCA1	YBR295W	OST6	Q03723	332 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	DFG5	Q05031	458 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	HDA2	Q06629	674 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	SYC1	Q08553	188 aa	Predicted RBP	4.57	□□□□□ -1.68
PCA1	YBR295W	YPR202W	Q08993	238 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
PCA1	YBR295W	STF1	P01098	86 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	SIR1	P21691	654 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	HCM1	P25364	564 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	BCK2	P33306	851 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	YUH1	P35127	236 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	YPK3	P38070	525 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	YBR259W	P38338	688 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	APM2	P38700	605 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	STL1	P39932	569 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	MET28	P40573	187 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	YFL034W	P43564	1073 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	SPT20	P50875	604 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	YGR042W	P53227	271 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	SPC98	P53540	846 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	YNR061C	P53747	219 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	ASA1	Q06822	443 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	OXR1	Q08952	273 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	SRO7	Q12038	1033 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	MDM32	Q12171	622 aa		4.57	□□□□□ -1.68
PCA1	YBR295W	NUP192	P47054	1683 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	PDR11	P40550	1411 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	MIR1	P23641	311 aa	Known RBP	4.56	□□□□□ -1.68
PCA1	YBR295W	SED4	P25365	1065 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	GPI10	P30777	616 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	RPC25	P35718	212 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	APN2	P38207	520 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	SAH1	P39954	449 aa	Known RBP	4.56	□□□□□ -1.68
PCA1	YBR295W	EFM3	P47163	339 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	CDA2	Q06703	312 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	THI21	Q08975	551 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	BMT6	Q12291	365 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	ERG27	Q12452	347 aa	Known RBP	4.56	□□□□□ -1.68
PCA1	YBR295W	TY1A-DR4	O74302	440 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	YFR010W-A	P0C5N0	62 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	TY1A-A	P0CX57	440 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	TY1A-PR1	P0CX58	440 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	TY1A-OR	P0CX59	440 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	TY1A-PR2	P0CX60	440 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	TY1A-DR5	P0CX65	440 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	TY1A-ER2	P0CX66	440 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	TY1A-GR3	P0CX67	440 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	TY1A-LR1	P0CX68	440 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	TY1A-MR2	P0CX69	440 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	RFA1	P22336	621 aa	Known RBP	4.56	□□□□□ -1.68
PCA1	YBR295W	IMG1	P25626	169 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	PHA2	P32452	334 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	HIR1	P32479	840 aa		4.56	□□□□□ -1.68
PCA1	YBR295W	FRD1	P32614	470 aa	Known RBP	4.56	□□□□□ -1.68
PCA1	YBR295W	SOP4	P39543	234 aa	Predicted RBP	4.56	□□□□□ -1.68
PCA1	YBR295W	GIP4	P39732	760 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms