RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W SCL1P21243 252 aaKnown RBP5.5□□□□□ -1.53
SHM1YBR263W PPH21P23594 369 aa5.5□□□□□ -1.53
SHM1YBR263W SOL2P37262 315 aa5.5□□□□□ -1.53
SHM1YBR263W YBR062CP38239 180 aa5.5□□□□□ -1.53
SHM1YBR263W DED81P38707 554 aaKnown RBP5.5□□□□□ -1.53
SHM1YBR263W YHB1P39676 399 aaKnown RBP5.5□□□□□ -1.53
SHM1YBR263W NPT1P39683 429 aaKnown RBP5.5□□□□□ -1.53
SHM1YBR263W COA1P40452 197 aa5.5□□□□□ -1.53
SHM1YBR263W PRM2P40534 656 aa5.5□□□□□ -1.53
SHM1YBR263W YPS6P40583 537 aa5.5□□□□□ -1.53
SHM1YBR263W ARC1P46672 376 aaKnown RBP5.5□□□□□ -1.53
SHM1YBR263W TRS85P46944 698 aa5.5□□□□□ -1.53
SHM1YBR263W CIS3P47001 227 aa5.5□□□□□ -1.53
SHM1YBR263W TY4A-JP47023 414 aa5.5□□□□□ -1.53
SHM1YBR263W NNF2P53253 936 aa5.5□□□□□ -1.53
SHM1YBR263W SUN4P53616 420 aa5.5□□□□□ -1.53
SHM1YBR263W AAT1Q01802 451 aa5.5□□□□□ -1.53
SHM1YBR263W ROT1Q03691 256 aa5.5□□□□□ -1.53
SHM1YBR263W SEC10Q06245 871 aa5.5□□□□□ -1.53
SHM1YBR263W HEM2P05373 342 aa5.49□□□□□ -1.53
SHM1YBR263W RHO2P06781 192 aa5.49□□□□□ -1.53
SHM1YBR263W GUK1P15454 187 aaKnown RBP5.49□□□□□ -1.53
SHM1YBR263W MRPL37P36532 105 aa5.49□□□□□ -1.53
SHM1YBR263W DHH1P39517 506 aaKnown RBP5.49□□□□□ -1.53
SHM1YBR263W GIM4P40005 111 aaKnown RBP5.49□□□□□ -1.53
SHM1YBR263W VMA13P41807 478 aaKnown RBP5.49□□□□□ -1.53
SHM1YBR263W PFA3P42836 336 aa5.49□□□□□ -1.53
SHM1YBR263W ZIM17P42844 174 aa5.49□□□□□ -1.53
SHM1YBR263W TEL2P53038 688 aa5.49□□□□□ -1.53
SHM1YBR263W MPS2P53159 387 aa5.49□□□□□ -1.53
SHM1YBR263W IBD2P53892 351 aa5.49□□□□□ -1.53
SHM1YBR263W TVP15Q03860 143 aa5.49□□□□□ -1.53
SHM1YBR263W RIF2Q06208 395 aa5.49□□□□□ -1.53
SHM1YBR263W RPN8Q08723 338 aaKnown RBP5.49□□□□□ -1.53
SHM1YBR263W PFA4Q12006 378 aa5.49□□□□□ -1.53
SHM1YBR263W PHO4P07270 312 aaKnown RBP5.48□□□□□ -1.53
SHM1YBR263W PRP16P15938 1071 aaPredicted RBP5.48□□□□□ -1.53
SHM1YBR263W ART10P18634 518 aaKnown RBP5.48□□□□□ -1.53
SHM1YBR263W CLN2P20438 545 aa5.48□□□□□ -1.53
SHM1YBR263W ERG6P25087 383 aaKnown RBP5.48□□□□□ -1.53
SHM1YBR263W HEM3P28789 327 aa5.48□□□□□ -1.53
SHM1YBR263W LOS1P33418 1100 aaPredicted RBP5.48□□□□□ -1.53
SHM1YBR263W SDH3P33421 198 aa5.48□□□□□ -1.53
SHM1YBR263W ATG14P38270 344 aa5.48□□□□□ -1.53
SHM1YBR263W SEC31P38968 1273 aaKnown RBP5.48□□□□□ -1.53
SHM1YBR263W YRB1P41920 201 aaKnown RBP5.48□□□□□ -1.53
SHM1YBR263W SSU1P41930 458 aa5.48□□□□□ -1.53
SHM1YBR263W YFR020WP43600 232 aa5.48□□□□□ -1.53
SHM1YBR263W TAF6P53040 516 aa5.48□□□□□ -1.53
SHM1YBR263W EFM5P53200 248 aaKnown RBP5.48□□□□□ -1.53
SHM1YBR263W YGR015CP53208 328 aa5.48□□□□□ -1.53
SHM1YBR263W SHY1P53266 389 aa5.48□□□□□ -1.53
SHM1YBR263W LSM3P57743 89 aaKnown RBP5.48□□□□□ -1.53
SHM1YBR263W GAS3Q03655 524 aa5.48□□□□□ -1.53
SHM1YBR263W DAL4Q04895 635 aa5.48□□□□□ -1.53
SHM1YBR263W THI73Q07904 523 aa5.48□□□□□ -1.53
SHM1YBR263W RSC58Q07979 502 aa5.48□□□□□ -1.53
SHM1YBR263W YOL019WQ08157 551 aa5.48□□□□□ -1.53
SHM1YBR263W NOT5Q12514 560 aaPredicted RBP5.48□□□□□ -1.53
SHM1YBR263W HRP1Q99383 534 aaKnown RBP5.48□□□□□ -1.53
SHM1YBR263W SPT3P06844 337 aa5.47□□□□□ -1.53
SHM1YBR263W RED1P14291 827 aa5.47□□□□□ -1.53
SHM1YBR263W SNF5P18480 905 aa5.47□□□□□ -1.53
SHM1YBR263W SEC15P22224 910 aa5.47□□□□□ -1.53
SHM1YBR263W PTH2P34222 208 aa5.47□□□□□ -1.53
SHM1YBR263W SQT1P35184 431 aa5.47□□□□□ -1.53
SHM1YBR263W MUM2P38236 366 aa5.47□□□□□ -1.53
SHM1YBR263W YPT35P38815 214 aaKnown RBP5.47□□□□□ -1.53
SHM1YBR263W YHR127WP38833 243 aaKnown RBP5.47□□□□□ -1.53
SHM1YBR263W YHR219WP38900 624 aa5.47□□□□□ -1.53
SHM1YBR263W ELO1P39540 310 aa5.47□□□□□ -1.53
SHM1YBR263W SPF1P39986 1215 aaKnown RBP5.47□□□□□ -1.53
SHM1YBR263W EMP65P40085 556 aa5.47□□□□□ -1.53
SHM1YBR263W LTP1P40347 161 aa5.47□□□□□ -1.53
SHM1YBR263W YJR154WP47181 346 aa5.47□□□□□ -1.53
SHM1YBR263W SLM2P53955 656 aa5.47□□□□□ -1.53
SHM1YBR263W CTK1Q03957 528 aaKnown RBP5.47□□□□□ -1.53
SHM1YBR263W SHE9Q04172 456 aa5.47□□□□□ -1.53
SHM1YBR263W YML096WQ04489 525 aa5.47□□□□□ -1.53
SHM1YBR263W BCH1Q05029 724 aa5.47□□□□□ -1.53
SHM1YBR263W RAD34Q06665 692 aa5.47□□□□□ -1.53
SHM1YBR263W GPB1Q08886 897 aa5.47□□□□□ -1.53
SHM1YBR263W PIN2Q12057 282 aa5.47□□□□□ -1.53
SHM1YBR263W RTK1Q12100 620 aaPredicted RBP5.47□□□□□ -1.53
SHM1YBR263W MCD1Q12158 566 aa5.47□□□□□ -1.53
SHM1YBR263W AHA1Q12449 350 aaKnown RBP5.47□□□□□ -1.53
SHM1YBR263W HSH49Q99181 213 aaPredicted RBP5.47□□□□□ -1.53
SHM1YBR263W POL2P21951 2222 aaKnown RBP5.47□□□□□ -1.53
SHM1YBR263W STE3P06783 470 aa5.46□□□□□ -1.53
SHM1YBR263W HEM13P11353 328 aaKnown RBP5.46□□□□□ -1.53
SHM1YBR263W RSR1P13856 272 aa5.46□□□□□ -1.53
SHM1YBR263W NMT1P14743 455 aa5.46□□□□□ -1.53
SHM1YBR263W CLB1P24868 471 aa5.46□□□□□ -1.53
SHM1YBR263W CRM1P30822 1084 aaKnown RBP5.46□□□□□ -1.53
SHM1YBR263W MGM101P32787 269 aaKnown RBP5.46□□□□□ -1.53
SHM1YBR263W YKL100CP34248 587 aa5.46□□□□□ -1.53
SHM1YBR263W PIM1P36775 1133 aa5.46□□□□□ -1.53
SHM1YBR263W CTP1P38152 299 aa5.46□□□□□ -1.53
SHM1YBR263W HSM3P38348 480 aa5.46□□□□□ -1.53
SHM1YBR263W VPS41P38959 992 aa5.46□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms