RNA–Protein interactions for RNA: YBR111W-A

SUS1, Transcript of Component of both the SAGA histone acetylase and TREX-2 complexes, yeastyeast

Gene SUS1, Length 291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUS1YBR111W-A MRPL51Q06090 140 aaPredicted RBP3.03□□□□□ -1.92
SUS1YBR111W-A SET6Q12529 373 aa3.03□□□□□ -1.92
SUS1YBR111W-A CDC31P06704 161 aaKnown RBP3.02□□□□□ -1.93
SUS1YBR111W-A ROX1P25042 368 aa3.02□□□□□ -1.93
SUS1YBR111W-A YCR022CP25620 114 aa3.02□□□□□ -1.93
SUS1YBR111W-A SPC110P32380 944 aa3.02□□□□□ -1.93
SUS1YBR111W-A ATP11P32453 318 aa3.02□□□□□ -1.93
SUS1YBR111W-A LOS1P33418 1100 aaPredicted RBP3.02□□□□□ -1.93
SUS1YBR111W-A SEC66P33754 206 aa3.02□□□□□ -1.93
SUS1YBR111W-A PMT1P33775 817 aa3.02□□□□□ -1.93
SUS1YBR111W-A MTC4P38335 694 aaKnown RBP3.02□□□□□ -1.93
SUS1YBR111W-A RPR2P40571 144 aa3.02□□□□□ -1.93
SUS1YBR111W-A HXT14P42833 540 aa3.02□□□□□ -1.93
SUS1YBR111W-A SLG1P54867 378 aa3.02□□□□□ -1.93
SUS1YBR111W-A TAF11Q04226 346 aa3.02□□□□□ -1.93
SUS1YBR111W-A RTT103Q05543 409 aa3.02□□□□□ -1.93
SUS1YBR111W-A YTH1Q06102 208 aaPredicted RBP3.02□□□□□ -1.93
SUS1YBR111W-A PPT2Q12036 173 aa3.02□□□□□ -1.93
SUS1YBR111W-A GRX6Q12438 231 aa3.02□□□□□ -1.93
SUS1YBR111W-A YBR298C-AQ8TGK4 73 aa3.02□□□□□ -1.93
SUS1YBR111W-A BRR1Q99177 341 aaPredicted RBP3.02□□□□□ -1.93
SUS1YBR111W-A RPL20AP0CX23 172 aaKnown RBP3.01□□□□□ -1.93
SUS1YBR111W-A RPL20BP0CX24 172 aaPredicted RBP3.01□□□□□ -1.93
SUS1YBR111W-A RED1P14291 827 aa3.01□□□□□ -1.93
SUS1YBR111W-A GLK1P17709 500 aaKnown RBP3.01□□□□□ -1.93
SUS1YBR111W-A EXO70P19658 623 aa3.01□□□□□ -1.93
SUS1YBR111W-A SMF1P38925 575 aa3.01□□□□□ -1.93
SUS1YBR111W-A CCT4P39078 528 aaKnown RBP3.01□□□□□ -1.93
SUS1YBR111W-A RPH1P39956 796 aa3.01□□□□□ -1.93
SUS1YBR111W-A POP1P41812 875 aa3.01□□□□□ -1.93
SUS1YBR111W-A YFR016CP43597 1233 aaKnown RBP3.01□□□□□ -1.93
SUS1YBR111W-A OCA1P50946 238 aaPredicted RBP3.01□□□□□ -1.93
SUS1YBR111W-A YGL108CP53139 140 aa3.01□□□□□ -1.93
SUS1YBR111W-A IRC15Q02733 499 aa3.01□□□□□ -1.93
SUS1YBR111W-A ERP1Q05359 219 aaKnown RBP3.01□□□□□ -1.93
SUS1YBR111W-A VPS74Q06385 345 aa3.01□□□□□ -1.93
SUS1YBR111W-A KEL3Q08979 651 aaPredicted RBP3.01□□□□□ -1.93
SUS1YBR111W-A RKM5Q12367 367 aa3.01□□□□□ -1.93
SUS1YBR111W-A RTN2Q12443 393 aa3.01□□□□□ -1.93
SUS1YBR111W-A PMU1P36069 295 aa3□□□□□ -1.93
SUS1YBR111W-A SHO1P40073 367 aa3□□□□□ -1.93
SUS1YBR111W-A YMR147WP40218 223 aaKnown RBP3□□□□□ -1.93
SUS1YBR111W-A SYG1P40528 902 aa3□□□□□ -1.93
SUS1YBR111W-A YJL213WP40896 331 aa3□□□□□ -1.93
SUS1YBR111W-A YDL186WP48568 277 aa3□□□□□ -1.93
SUS1YBR111W-A TAP42Q04372 366 aa3□□□□□ -1.93
SUS1YBR111W-A RQC1Q05468 723 aaKnown RBP3□□□□□ -1.93
SUS1YBR111W-A AYT1Q12226 474 aa3□□□□□ -1.93
SUS1YBR111W-A CYB2P00175 591 aa2.99□□□□□ -1.93
SUS1YBR111W-A HEM2P05373 342 aa2.99□□□□□ -1.93
SUS1YBR111W-A GDH1P07262 454 aaKnown RBP2.99□□□□□ -1.93
SUS1YBR111W-A PRP16P15938 1071 aaPredicted RBP2.99□□□□□ -1.93
SUS1YBR111W-A MCK1P21965 375 aaKnown RBP2.99□□□□□ -1.93
SUS1YBR111W-A AFG1P32317 509 aa2.99□□□□□ -1.93
SUS1YBR111W-A AGA1P32323 725 aa2.99□□□□□ -1.93
SUS1YBR111W-A KRE9P39005 276 aa2.99□□□□□ -1.93
SUS1YBR111W-A HAT2P39984 401 aa2.99□□□□□ -1.93
SUS1YBR111W-A ALG8P40351 577 aa2.99□□□□□ -1.93
SUS1YBR111W-A ELP2P42935 788 aa2.99□□□□□ -1.93
SUS1YBR111W-A GWT1P47026 490 aa2.99□□□□□ -1.93
SUS1YBR111W-A SRB7P47822 140 aa2.99□□□□□ -1.93
SUS1YBR111W-A COS10P52924 374 aa2.99□□□□□ -1.93
SUS1YBR111W-A SPB1P25582 841 aaPredicted RBP2.98□□□□□ -1.93
SUS1YBR111W-A BUB3P26449 341 aa2.98□□□□□ -1.93
SUS1YBR111W-A RAD14P28519 371 aa2.98□□□□□ -1.93
SUS1YBR111W-A ERG3P32353 365 aa2.98□□□□□ -1.93
SUS1YBR111W-A MFT1P33441 392 aaKnown RBP2.98□□□□□ -1.93
SUS1YBR111W-A CBP4P37267 147 aa2.98□□□□□ -1.93
SUS1YBR111W-A OTU2P38747 307 aaKnown RBP2.98□□□□□ -1.93
SUS1YBR111W-A FAU1P40099 211 aa2.98□□□□□ -1.93
SUS1YBR111W-A URB2P47108 1174 aa2.98□□□□□ -1.93
SUS1YBR111W-A YGR149WP48236 432 aa2.98□□□□□ -1.93
SUS1YBR111W-A SYF1Q04048 859 aaPredicted RBP2.98□□□□□ -1.93
SUS1YBR111W-A YLR287CQ05881 355 aa2.98□□□□□ -1.93
SUS1YBR111W-A YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
SUS1YBR111W-A PGA3Q12746 312 aaKnown RBP2.98□□□□□ -1.93
SUS1YBR111W-A YOL159C-AQ3E769 90 aa2.98□□□□□ -1.93
SUS1YBR111W-A RHO2P06781 192 aa2.97□□□□□ -1.93
SUS1YBR111W-A ATR1P13090 542 aa2.97□□□□□ -1.93
SUS1YBR111W-A RPL3P14126 387 aaKnown RBP2.97□□□□□ -1.93
SUS1YBR111W-A PUT3P25502 979 aaPredicted RBP2.97□□□□□ -1.93
SUS1YBR111W-A FUN19P28003 413 aaPredicted RBP2.97□□□□□ -1.93
SUS1YBR111W-A HXT3P32466 567 aaKnown RBP2.97□□□□□ -1.93
SUS1YBR111W-A TUL1P36096 758 aa2.97□□□□□ -1.93
SUS1YBR111W-A JNM1P36224 373 aa2.97□□□□□ -1.93
SUS1YBR111W-A VMA13P41807 478 aaKnown RBP2.97□□□□□ -1.93
SUS1YBR111W-A IMP4P53941 290 aaKnown RBP2.97□□□□□ -1.93
SUS1YBR111W-A KTR5P53966 522 aaPredicted RBP2.97□□□□□ -1.93
SUS1YBR111W-A RRD2Q12461 358 aa2.97□□□□□ -1.93
SUS1YBR111W-A CTF3Q12748 733 aa2.97□□□□□ -1.93
SUS1YBR111W-A LEU4P06208 619 aaKnown RBP2.96□□□□□ -1.94
SUS1YBR111W-A SPS4P09937 338 aa2.96□□□□□ -1.94
SUS1YBR111W-A ATP10P18496 279 aa2.96□□□□□ -1.94
SUS1YBR111W-A PPH22P23595 377 aa2.96□□□□□ -1.94
SUS1YBR111W-A IDH2P28241 369 aaKnown RBP2.96□□□□□ -1.94
SUS1YBR111W-A RGT1P32862 1170 aa2.96□□□□□ -1.94
SUS1YBR111W-A SAS3P34218 831 aa2.96□□□□□ -1.94
SUS1YBR111W-A FRE2P36033 711 aa2.96□□□□□ -1.94
SUS1YBR111W-A THI2P38141 450 aa2.96□□□□□ -1.94
SUS1YBR111W-A YHR218WP38899 603 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms