RNA–Protein interactions for RNA: RUF20

RUF20, Transcript of RNA of Unknown Function, yeast

Gene RUF20, Length 443 nt, Biotype ncRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUF20	RUF20	HCR1	Q05775	265 aa	Known RBP	4.09	□□□□□ -1.75
RUF20	RUF20	SYO1	Q07395	620 aa		4.09	□□□□□ -1.75
RUF20	RUF20	CFT2	Q12102	859 aa	Predicted RBP	4.09	□□□□□ -1.75
RUF20	RUF20	YDL009C	Q12210	107 aa		4.09	□□□□□ -1.75
RUF20	RUF20	LSP1	Q12230	341 aa	Known RBP	4.09	□□□□□ -1.75
RUF20	RUF20	SFI1	Q12369	946 aa		4.09	□□□□□ -1.75
RUF20	RUF20	YOL159C-A	Q3E769	90 aa		4.09	□□□□□ -1.75
RUF20	RUF20	FUR1	P18562	216 aa	Known RBP	4.08	□□□□□ -1.76
RUF20	RUF20	ATP11	P32453	318 aa		4.08	□□□□□ -1.76
RUF20	RUF20	YGL108C	P53139	140 aa		4.08	□□□□□ -1.76
RUF20	RUF20	GPI1	P53306	609 aa		4.08	□□□□□ -1.76
RUF20	RUF20	RLI1	Q03195	608 aa	Known RBP	4.08	□□□□□ -1.76
RUF20	RUF20	YMR317W	Q04893	1140 aa		4.08	□□□□□ -1.76
RUF20	RUF20	MRPL51	Q06090	140 aa	Predicted RBP	4.08	□□□□□ -1.76
RUF20	RUF20	CAR1	P00812	333 aa	Known RBP	4.07	□□□□□ -1.76
RUF20	RUF20	MES1	P00958	751 aa	Known RBP	4.07	□□□□□ -1.76
RUF20	RUF20	YMR147W	P40218	223 aa	Known RBP	4.07	□□□□□ -1.76
RUF20	RUF20	VMA13	P41807	478 aa	Known RBP	4.07	□□□□□ -1.76
RUF20	RUF20	OCA1	P50946	238 aa	Predicted RBP	4.07	□□□□□ -1.76
RUF20	RUF20	RPA49	Q01080	415 aa	Predicted RBP	4.07	□□□□□ -1.76
RUF20	RUF20	SPC19	Q03954	165 aa		4.07	□□□□□ -1.76
RUF20	RUF20	KEL3	Q08979	651 aa	Predicted RBP	4.07	□□□□□ -1.76
RUF20	RUF20	RRG1	Q12167	365 aa	Predicted RBP	4.07	□□□□□ -1.76
RUF20	RUF20	GLK1	P17709	500 aa	Known RBP	4.06	□□□□□ -1.76
RUF20	RUF20	CLB3	P24870	427 aa		4.06	□□□□□ -1.76
RUF20	RUF20	SPB1	P25582	841 aa	Predicted RBP	4.06	□□□□□ -1.76
RUF20	RUF20	HXT3	P32466	567 aa	Known RBP	4.06	□□□□□ -1.76
RUF20	RUF20	NDC1	P32500	655 aa		4.06	□□□□□ -1.76
RUF20	RUF20	PTR2	P32901	601 aa		4.06	□□□□□ -1.76
RUF20	RUF20	MFT1	P33441	392 aa	Known RBP	4.06	□□□□□ -1.76
RUF20	RUF20	SAS3	P34218	831 aa		4.06	□□□□□ -1.76
RUF20	RUF20	LSM5	P40089	93 aa	Known RBP	4.06	□□□□□ -1.76
RUF20	RUF20	SYG1	P40528	902 aa		4.06	□□□□□ -1.76
RUF20	RUF20	GPD2	P41911	440 aa	Known RBP	4.06	□□□□□ -1.76
RUF20	RUF20	URB2	P47108	1174 aa		4.06	□□□□□ -1.76
RUF20	RUF20	YGR250C	P53316	781 aa	Known RBP	4.06	□□□□□ -1.76
RUF20	RUF20	CRZ1	P53968	678 aa		4.06	□□□□□ -1.76
RUF20	RUF20	YMR155W	Q03795	547 aa		4.06	□□□□□ -1.76
RUF20	RUF20	RHO2	P06781	192 aa		4.05	□□□□□ -1.76
RUF20	RUF20	YML002W	P0CF17	737 aa		4.05	□□□□□ -1.76
RUF20	RUF20	RPL3	P14126	387 aa	Known RBP	4.05	□□□□□ -1.76
RUF20	RUF20	MTF1	P14908	341 aa	Known RBP	4.05	□□□□□ -1.76
RUF20	RUF20	EXO70	P19658	623 aa		4.05	□□□□□ -1.76
RUF20	RUF20	RAD14	P28519	371 aa		4.05	□□□□□ -1.76
RUF20	RUF20	RTT101	P47050	842 aa		4.05	□□□□□ -1.76
RUF20	RUF20	YGR149W	P48236	432 aa		4.05	□□□□□ -1.76
RUF20	RUF20	VTA1	Q06263	330 aa		4.05	□□□□□ -1.76
RUF20	RUF20	RKM5	Q12367	367 aa		4.05	□□□□□ -1.76
RUF20	RUF20	RRD2	Q12461	358 aa		4.05	□□□□□ -1.76
RUF20	RUF20	RPL15A	P05748	204 aa	Known RBP	4.04	□□□□□ -1.76
RUF20	RUF20	SPS4	P09937	338 aa		4.04	□□□□□ -1.76
RUF20	RUF20	AFG1	P32317	509 aa		4.04	□□□□□ -1.76
RUF20	RUF20	LOS1	P33418	1100 aa	Predicted RBP	4.04	□□□□□ -1.76
RUF20	RUF20	DHH1	P39517	506 aa	Known RBP	4.04	□□□□□ -1.76
RUF20	RUF20	FAU1	P40099	211 aa		4.04	□□□□□ -1.76
RUF20	RUF20	POP1	P41812	875 aa		4.04	□□□□□ -1.76
RUF20	RUF20	VTC2	P43585	828 aa		4.04	□□□□□ -1.76
RUF20	RUF20	DLD2	P46681	530 aa	Known RBP	4.04	□□□□□ -1.76
RUF20	RUF20	IRC15	Q02733	499 aa		4.04	□□□□□ -1.76
RUF20	RUF20	ERP1	Q05359	219 aa	Known RBP	4.04	□□□□□ -1.76
RUF20	RUF20	VPS74	Q06385	345 aa		4.04	□□□□□ -1.76
RUF20	RUF20	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
RUF20	RUF20	ATP10	P18496	279 aa		4.03	□□□□□ -1.76
RUF20	RUF20	PPH22	P23595	377 aa		4.03	□□□□□ -1.76
RUF20	RUF20	BUB3	P26449	341 aa		4.03	□□□□□ -1.76
RUF20	RUF20	ATS1	P31386	333 aa		4.03	□□□□□ -1.76
RUF20	RUF20	SPC110	P32380	944 aa		4.03	□□□□□ -1.76
RUF20	RUF20	MPE1	P35728	441 aa	Known RBP	4.03	□□□□□ -1.76
RUF20	RUF20	BYE1	P36106	594 aa		4.03	□□□□□ -1.76
RUF20	RUF20	FMP46	P36141	133 aa	Known RBP	4.03	□□□□□ -1.76
RUF20	RUF20	RPR2	P40571	144 aa		4.03	□□□□□ -1.76
RUF20	RUF20	YGL260W	P53056	76 aa		4.03	□□□□□ -1.76
RUF20	RUF20	MNP1	P53163	194 aa	Predicted RBP	4.03	□□□□□ -1.76
RUF20	RUF20	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
RUF20	RUF20	TIP41	Q12199	356 aa		4.03	□□□□□ -1.76
RUF20	RUF20	CLC1	P17891	233 aa		4.02	□□□□□ -1.77
RUF20	RUF20	YCR022C	P25620	114 aa		4.02	□□□□□ -1.77
RUF20	RUF20	FUN19	P28003	413 aa	Predicted RBP	4.02	□□□□□ -1.77
RUF20	RUF20	YIM1	P28625	365 aa		4.02	□□□□□ -1.77
RUF20	RUF20	TUL1	P36096	758 aa		4.02	□□□□□ -1.77
RUF20	RUF20	MTC4	P38335	694 aa	Known RBP	4.02	□□□□□ -1.77
RUF20	RUF20	MDM31	P38880	579 aa		4.02	□□□□□ -1.77
RUF20	RUF20	ELP2	P42935	788 aa		4.02	□□□□□ -1.77
RUF20	RUF20	RMD9	P53140	646 aa	Known RBP	4.02	□□□□□ -1.77
RUF20	RUF20	KTR5	P53966	522 aa	Predicted RBP	4.02	□□□□□ -1.77
RUF20	RUF20	GIR2	Q03768	265 aa	Predicted RBP	4.02	□□□□□ -1.77
RUF20	RUF20	AYT1	Q12226	474 aa		4.02	□□□□□ -1.77
RUF20	RUF20	SET6	Q12529	373 aa		4.02	□□□□□ -1.77
RUF20	RUF20	YRF1-4	O13559	1382 aa		4.02	□□□□□ -1.77
RUF20	RUF20	CYB2	P00175	591 aa		4.01	□□□□□ -1.77
RUF20	RUF20	RPL20A	P0CX23	172 aa	Known RBP	4.01	□□□□□ -1.77
RUF20	RUF20	RPL20B	P0CX24	172 aa	Predicted RBP	4.01	□□□□□ -1.77
RUF20	RUF20	IDH2	P28241	369 aa	Known RBP	4.01	□□□□□ -1.77
RUF20	RUF20	GYP6	P32806	458 aa		4.01	□□□□□ -1.77
RUF20	RUF20	CBP4	P37267	147 aa		4.01	□□□□□ -1.77
RUF20	RUF20	THI2	P38141	450 aa		4.01	□□□□□ -1.77
RUF20	RUF20	RPH1	P39956	796 aa		4.01	□□□□□ -1.77
RUF20	RUF20	HAT2	P39984	401 aa		4.01	□□□□□ -1.77
RUF20	RUF20	SHO1	P40073	367 aa		4.01	□□□□□ -1.77
RUF20	RUF20	TFG2	P41896	400 aa	Predicted RBP	4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms