RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 HPS3Q969F9 1004 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 ATP6V1G3Q96LB4 118 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 SH3GL3Q99963 347 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 TUBGCP2Q9BSJ2 902 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 LEMD3Q9Y2U8 911 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 NKRFO15226 690 aaKnown RBP eCLIP17.37■□□□□ 0.37
LINC02228-204ENST00000642115 CDC25CP30307 473 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 UBA7P41226 1012 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 GYG1P46976 350 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 SEMA3FQ13275 785 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 NFRKBQ6P4R8 1299 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 CCDC42Q96M95 316 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 MYO1EQ12965 1108 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 SPA17Q15506 151 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 CCDC181Q5TID7 509 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 CDCA2Q69YH5 1023 aaPredicted RBP17.37■□□□□ 0.37
LINC02228-204ENST00000642115 FNBP4Q8N3X1 1017 aaPredicted RBP17.37■□□□□ 0.37
LINC02228-204ENST00000642115 IFT81Q8WYA0 676 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 ZBTB10Q96DT7 871 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 NOD2Q9HC29 1040 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.37■□□□□ 0.37
LINC02228-204ENST00000642115 CAPN6Q9Y6Q1 641 aa17.37■□□□□ 0.37
LINC02228-204ENST00000642115 ATRNO75882 1429 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 USP17L12C9JPN9 530 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 USP17L21D6R901 530 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 PSMA7O14818 248 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 MOCS3O95396 460 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 GLI1P08151 1106 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 FGFR2P21802 821 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 VAV2P52735 878 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 RNASE9P60153 205 aaKnown RBP17.36■□□□□ 0.37
LINC02228-204ENST00000642115 FUT2Q10981 343 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 XRCC4Q13426 336 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 NPY5RQ15761 445 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 ZNF662Q6ZS27 426 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 MICAL1Q8TDZ2 1067 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 FAM207AQ9NSI2 230 aaPredicted RBP17.36■□□□□ 0.37
LINC02228-204ENST00000642115 CAPN11Q9UMQ6 739 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 JAG2Q9Y219 1238 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 ADAMTS7Q9UKP4 1686 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 PHRF1Q9P1Y6 1649 aaKnown RBP17.36■□□□□ 0.37
LINC02228-204ENST00000642115 GMNCA6NCL1 334 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 NCK2O43639 380 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 ATP6V1G2O95670 118 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 KCTD19Q17RG1 926 aaPredicted RBP17.36■□□□□ 0.37
LINC02228-204ENST00000642115 ADSSL1Q8N142 457 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 PURBQ96QR8 312 aaKnown RBP17.36■□□□□ 0.37
LINC02228-204ENST00000642115 ETAA1Q9NY74 926 aa17.36■□□□□ 0.37
LINC02228-204ENST00000642115 TROAPQ12815 778 aa17.35■□□□□ 0.37
LINC02228-204ENST00000642115 C8orf74Q6P047 294 aa17.35■□□□□ 0.37
LINC02228-204ENST00000642115 DZIP3Q86Y13 1208 aaKnown RBP17.35■□□□□ 0.37
LINC02228-204ENST00000642115 RUBCNQ92622 972 aa17.35■□□□□ 0.37
LINC02228-204ENST00000642115 SEC16BQ96JE7 1060 aa17.35■□□□□ 0.37
LINC02228-204ENST00000642115 RBM12Q9NTZ6 932 aaKnown RBP17.35■□□□□ 0.37
LINC02228-204ENST00000642115 MROH5Q6ZUA9 1318 aa17.35■□□□□ 0.37
LINC02228-204ENST00000642115 TJP1Q07157 1748 aa17.35■□□□□ 0.37
LINC02228-204ENST00000642115 ELF3P78545 371 aaPredicted RBP17.35■□□□□ 0.37
LINC02228-204ENST00000642115 BYSLQ13895 437 aaKnown RBP17.35■□□□□ 0.37
LINC02228-204ENST00000642115 PPP4R3AQ6IN85 833 aa17.35■□□□□ 0.37
LINC02228-204ENST00000642115 C2CD5Q86YS7 1000 aa17.35■□□□□ 0.37
LINC02228-204ENST00000642115 CCDC26Q8TAB7 109 aa17.35■□□□□ 0.37
LINC02228-204ENST00000642115 HOOK2Q96ED9 719 aa17.35■□□□□ 0.37
LINC02228-204ENST00000642115 OSBPL9Q96SU4 736 aa17.35■□□□□ 0.37
LINC02228-204ENST00000642115 NOC4LQ9BVI4 516 aaKnown RBP17.35■□□□□ 0.37
LINC02228-204ENST00000642115 EXOC1Q9NV70 894 aa17.35■□□□□ 0.37
LINC02228-204ENST00000642115 BUB1BO60566 1050 aaPredicted RBP17.34■□□□□ 0.37
LINC02228-204ENST00000642115 ITIH3Q06033 890 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 IFFO1Q0D2I5 559 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 TMTC3Q6ZXV5 915 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 ZNF572Q7Z3I7 529 aaPredicted RBP17.34■□□□□ 0.37
LINC02228-204ENST00000642115 NUP58Q9BVL2 599 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 SLC39A2Q9NP94 309 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 AKAP11Q9UKA4 1901 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 SCG2P13521 617 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 TMOD1P28289 359 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 ENOX2Q16206 610 aaKnown RBP17.34■□□□□ 0.37
LINC02228-204ENST00000642115 HIBCHQ6NVY1 386 aaPredicted RBP17.34■□□□□ 0.37
LINC02228-204ENST00000642115 DTHD1Q6ZMT9 781 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 BZW1Q7L1Q6 419 aaKnown RBP17.34■□□□□ 0.37
LINC02228-204ENST00000642115 SAAL1Q96ER3 474 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 DNAJC5Q9H3Z4 198 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 DNM2P50570 870 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 GLE1Q53GS7 698 aaKnown RBP17.34■□□□□ 0.37
LINC02228-204ENST00000642115 CUL5Q93034 780 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 TMEM60Q9H2L4 133 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 MMRN2Q9H8L6 949 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 EPB41L5Q9HCM4 733 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 L3MBTL1Q9Y468 752 aa17.34■□□□□ 0.37
LINC02228-204ENST00000642115 ZNF263O14978 683 aa17.33■□□□□ 0.37
LINC02228-204ENST00000642115 BUB1O43683 1085 aa17.33■□□□□ 0.37
LINC02228-204ENST00000642115 AKR1B10O60218 316 aa17.33■□□□□ 0.37
LINC02228-204ENST00000642115 ICA1Q05084 483 aa17.33■□□□□ 0.37
LINC02228-204ENST00000642115 SNX1Q13596 522 aa17.33■□□□□ 0.37
LINC02228-204ENST00000642115 TRADDQ15628 312 aa17.33■□□□□ 0.37
LINC02228-204ENST00000642115 INF2Q27J81 1249 aa17.33■□□□□ 0.37
LINC02228-204ENST00000642115 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.33■□□□□ 0.37
LINC02228-204ENST00000642115 MAATS1Q7Z4T9 603 aa17.33■□□□□ 0.37
LINC02228-204ENST00000642115 CD302Q8IX05 232 aa17.33■□□□□ 0.37
LINC02228-204ENST00000642115 SPDYE1Q8NFV5 336 aaPredicted RBP17.33■□□□□ 0.37
LINC02228-204ENST00000642115 TNFRSF25Q93038 417 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms