RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ASB14A6NK59 587 aa15.15■□□□□ 0.02
GTF3A-209ENST00000640289 CYBAP13498 195 aa15.15■□□□□ 0.02
GTF3A-209ENST00000640289 CCND3P30281 292 aaPredicted RBP15.15■□□□□ 0.02
GTF3A-209ENST00000640289 CLK2P49760 499 aaKnown RBP15.15■□□□□ 0.02
GTF3A-209ENST00000640289 MRPL12P52815 198 aaKnown RBP15.15■□□□□ 0.02
GTF3A-209ENST00000640289 HMGN5P82970 282 aaKnown RBP15.15■□□□□ 0.02
GTF3A-209ENST00000640289 CUL4AQ13619 759 aa15.15■□□□□ 0.02
GTF3A-209ENST00000640289 MAP3K21Q5TCX8 1036 aa15.15■□□□□ 0.02
GTF3A-209ENST00000640289 ARHGEF16Q5VV41 709 aa15.15■□□□□ 0.02
GTF3A-209ENST00000640289 EEPD1Q7L9B9 569 aa15.15■□□□□ 0.02
GTF3A-209ENST00000640289 TNS4Q8IZW8 715 aa15.15■□□□□ 0.02
GTF3A-209ENST00000640289 MSL3Q8N5Y2 521 aaKnown RBP15.15■□□□□ 0.02
GTF3A-209ENST00000640289 RASGRP4Q8TDF6 673 aa15.15■□□□□ 0.02
GTF3A-209ENST00000640289 NSUN6Q8TEA1 469 aaKnown RBP15.15■□□□□ 0.02
GTF3A-209ENST00000640289 UNC93B1Q9H1C4 597 aa15.15■□□□□ 0.02
GTF3A-209ENST00000640289 RBBP6Q7Z6E9 1792 aaKnown RBP15.14■□□□□ 0.01
GTF3A-209ENST00000640289 EDNRBP24530 442 aa15.14■□□□□ 0.01
GTF3A-209ENST00000640289 GNA11P29992 359 aa15.14■□□□□ 0.01
GTF3A-209ENST00000640289 PGM5Q15124 567 aa15.14■□□□□ 0.01
GTF3A-209ENST00000640289 NPY5RQ15761 445 aa15.14■□□□□ 0.01
GTF3A-209ENST00000640289 JAKMIP3Q5VZ66 844 aa15.14■□□□□ 0.01
GTF3A-209ENST00000640289 HSCBQ8IWL3 235 aa15.14■□□□□ 0.01
GTF3A-209ENST00000640289 FBXO16Q8IX29 292 aaPredicted RBP15.14■□□□□ 0.01
GTF3A-209ENST00000640289 IL31RAQ8NI17 732 aa15.14■□□□□ 0.01
GTF3A-209ENST00000640289 MORC4Q8TE76 937 aa15.14■□□□□ 0.01
GTF3A-209ENST00000640289 ZFP91Q96JP5 570 aaPredicted RBP15.14■□□□□ 0.01
GTF3A-209ENST00000640289 PDCD2LQ9BRP1 358 aa15.14■□□□□ 0.01
GTF3A-209ENST00000640289 PHF20Q9BVI0 1012 aa15.14■□□□□ 0.01
GTF3A-209ENST00000640289 ZHX1Q9UKY1 873 aaPredicted RBP15.14■□□□□ 0.01
GTF3A-209ENST00000640289 PCDHA6Q9UN73 950 aa15.14■□□□□ 0.01
GTF3A-209ENST00000640289 CNPY2Q9Y2B0 182 aa15.14■□□□□ 0.01
GTF3A-209ENST00000640289 PCDHA8Q9Y5H6 950 aa15.14■□□□□ 0.01
GTF3A-209ENST00000640289 RPTORQ8N122 1335 aa15.14■□□□□ 0.01
GTF3A-209ENST00000640289 ZNFX1Q9P2E3 1918 aaKnown RBP15.13■□□□□ 0.01
GTF3A-209ENST00000640289 SPDYE3A6NKU9 549 aa15.13■□□□□ 0.01
GTF3A-209ENST00000640289 NR3C2P08235 984 aa15.13■□□□□ 0.01
GTF3A-209ENST00000640289 ZNF865P0CJ78 1059 aaPredicted RBP15.13■□□□□ 0.01
GTF3A-209ENST00000640289 MYCLP12524 364 aaPredicted RBP15.13■□□□□ 0.01
GTF3A-209ENST00000640289 XBP1P17861 261 aa15.13■□□□□ 0.01
GTF3A-209ENST00000640289 GJB2P29033 226 aa15.13■□□□□ 0.01
GTF3A-209ENST00000640289 PDE4DQ08499 809 aa15.13■□□□□ 0.01
GTF3A-209ENST00000640289 FAM184AQ8NB25 1140 aa15.13■□□□□ 0.01
GTF3A-209ENST00000640289 ABHD8Q96I13 439 aa15.13■□□□□ 0.01
GTF3A-209ENST00000640289 ANO3Q9BYT9 981 aa15.13■□□□□ 0.01
GTF3A-209ENST00000640289 KATNBL1Q9H079 304 aa15.13■□□□□ 0.01
GTF3A-209ENST00000640289 GLT8D2Q9H1C3 349 aa15.13■□□□□ 0.01
GTF3A-209ENST00000640289 FOXD4L1Q9NU39 408 aa15.13■□□□□ 0.01
GTF3A-209ENST00000640289 PCDHA4Q9UN74 947 aa15.13■□□□□ 0.01
GTF3A-209ENST00000640289 FRMPD4Q14CM0 1322 aa15.13■□□□□ 0.01
GTF3A-209ENST00000640289 PLXNA1Q9UIW2 1896 aa15.12■□□□□ 0.01
GTF3A-209ENST00000640289 LOC102724159A0A0B4J2E5 919 aa15.12■□□□□ 0.01
GTF3A-209ENST00000640289 CCL5P13501 91 aa15.12■□□□□ 0.01
GTF3A-209ENST00000640289 CNGA1P29973 690 aa15.12■□□□□ 0.01
GTF3A-209ENST00000640289 GUCY1B3Q02153 619 aa15.12■□□□□ 0.01
GTF3A-209ENST00000640289 ACVR2BQ13705 512 aa15.12■□□□□ 0.01
GTF3A-209ENST00000640289 PWP2Q15269 919 aaKnown RBP15.12■□□□□ 0.01
GTF3A-209ENST00000640289 KRT40Q6A162 431 aa15.12■□□□□ 0.01
GTF3A-209ENST00000640289 BLIDQ8IZY5 108 aa15.12■□□□□ 0.01
GTF3A-209ENST00000640289 REXO1Q8N1G1 1221 aaKnown RBP15.12■□□□□ 0.01
GTF3A-209ENST00000640289 DAGLBQ8NCG7 672 aa15.12■□□□□ 0.01
GTF3A-209ENST00000640289 OXER1Q8TDS5 423 aa15.12■□□□□ 0.01
GTF3A-209ENST00000640289 IWS1Q96ST2 819 aa15.12■□□□□ 0.01
GTF3A-209ENST00000640289 RNF208Q9H0X6 261 aa15.12■□□□□ 0.01
GTF3A-209ENST00000640289 ABHD16BQ9H3Z7 469 aa15.12■□□□□ 0.01
GTF3A-209ENST00000640289 HMX1Q9NP08 348 aaPredicted RBP15.12■□□□□ 0.01
GTF3A-209ENST00000640289 PDGFCQ9NRA1 345 aa15.12■□□□□ 0.01
GTF3A-209ENST00000640289 SMC3Q9UQE7 1217 aa15.12■□□□□ 0.01
GTF3A-209ENST00000640289 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.12■□□□□ 0.01
GTF3A-209ENST00000640289 B4DLN1 442 aa15.11■□□□□ 0.01
GTF3A-209ENST00000640289 M0R2N6 131 aa15.11■□□□□ 0.01
GTF3A-209ENST00000640289 AP3B2Q13367 1082 aa15.11■□□□□ 0.01
GTF3A-209ENST00000640289 STXBP2Q15833 593 aa15.11■□□□□ 0.01
GTF3A-209ENST00000640289 FAM177A1Q8N128 213 aaPredicted RBP15.11■□□□□ 0.01
GTF3A-209ENST00000640289 BICD2Q8TD16 824 aa15.11■□□□□ 0.01
GTF3A-209ENST00000640289 C8orf76Q96K31 380 aa15.11■□□□□ 0.01
GTF3A-209ENST00000640289 MPHOSPH6Q99547 160 aaKnown RBP15.11■□□□□ 0.01
GTF3A-209ENST00000640289 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.11■□□□□ 0.01
GTF3A-209ENST00000640289 NRBP1Q9UHY1 535 aa15.11■□□□□ 0.01
GTF3A-209ENST00000640289 HTTP42858 3142 aa15.1■□□□□ 0.01
GTF3A-209ENST00000640289 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.1■□□□□ 0.01
GTF3A-209ENST00000640289 ADCY6O43306 1168 aa15.1■□□□□ 0.01
GTF3A-209ENST00000640289 FOSP01100 380 aaPredicted RBP15.1■□□□□ 0.01
GTF3A-209ENST00000640289 MMP1P03956 469 aa15.1■□□□□ 0.01
GTF3A-209ENST00000640289 CCND2P30279 289 aa15.1■□□□□ 0.01
GTF3A-209ENST00000640289 MRPS9P82933 396 aaKnown RBP15.1■□□□□ 0.01
GTF3A-209ENST00000640289 TRIM29Q14134 588 aa15.1■□□□□ 0.01
GTF3A-209ENST00000640289 TMEM63BQ5T3F8 832 aa15.1■□□□□ 0.01
GTF3A-209ENST00000640289 ANO1Q5XXA6 986 aa15.1■□□□□ 0.01
GTF3A-209ENST00000640289 TAPT1Q6NXT6 567 aa15.1■□□□□ 0.01
GTF3A-209ENST00000640289 VSIG10LQ86VR7 867 aa15.1■□□□□ 0.01
GTF3A-209ENST00000640289 TEX2Q8IWB9 1127 aa15.1■□□□□ 0.01
GTF3A-209ENST00000640289 LENG1Q96BZ8 264 aaPredicted RBP15.1■□□□□ 0.01
GTF3A-209ENST00000640289 VTA1Q9NP79 307 aa15.1■□□□□ 0.01
GTF3A-209ENST00000640289 PAK6Q9NQU5 681 aaPredicted RBP15.1■□□□□ 0.01
GTF3A-209ENST00000640289 RTEL1Q9NZ71 1219 aa15.1■□□□□ 0.01
GTF3A-209ENST00000640289 SEPT4O43236 478 aa15.09■□□□□ 0.01
GTF3A-209ENST00000640289 RGS20O76081 388 aa15.09■□□□□ 0.01
GTF3A-209ENST00000640289 PTGS1P23219 599 aa15.09■□□□□ 0.01
GTF3A-209ENST00000640289 ADCYAP1R1P41586 468 aa15.09■□□□□ 0.01
GTF3A-209ENST00000640289 NR5A1Q13285 461 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms