RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 CD44P16070 742 aaKnown RBP13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 HOXA13P31271 388 aaPredicted RBP13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 CLCN1P35523 988 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 SEMA3FQ13275 785 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 GRB10Q13322 594 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 MTMR2Q13614 643 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 KCNB1Q14721 858 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 Q4G0T1 1027 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 PRAMEF18Q5VWM3 479 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 KRT79Q5XKE5 535 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 LDHDQ86WU2 507 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 SNX29Q8TEQ0 813 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 MED15Q96RN5 788 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 AS3MTQ9HBK9 375 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 RTN4Q9NQC3 1192 aaKnown RBP13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 PCDHA12Q9UN75 941 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 PARP14Q460N5 1801 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 ZNF536O15090 1300 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 PPP1R3GB7ZBB8 358 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 GCOM1H8Y6P7 765 aaPredicted RBP13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 TBX3O15119 743 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 CFBP00751 764 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 ICAM1P05362 532 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 POLR2MP0CAP2 368 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 YBX3P16989 372 aaKnown RBP eCLIP13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 PTPRAP18433 802 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 VCAM1P19320 739 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 FANCCQ00597 558 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 ZNF658Q5TYW1 1059 aaPredicted RBP13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 SAMD1Q6SPF0 538 aaPredicted RBP13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 TRMT44Q8IYL2 757 aaKnown RBP13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 SLFN12Q8IYM2 578 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 ETNPPLQ8TBG4 499 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 LENG9Q96B70 501 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 PNMA5Q96PV4 448 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 XPO4Q9C0E2 1151 aaKnown RBP13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 PICK1Q9NRD5 415 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 EMILIN3Q9NT22 766 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 FANCLQ9NW38 375 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 IFNKQ9P0W0 207 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 NFE2L3Q9Y4A8 694 aa13.78□□□□□ -0.2
CACNA1D-228ENST00000638120 SYNRGQ9UMZ2 1314 aa13.77□□□□□ -0.2
CACNA1D-228ENST00000638120 RBBP6Q7Z6E9 1792 aaKnown RBP13.77□□□□□ -0.21
CACNA1D-228ENST00000638120 KLRC4O43908 158 aa13.77□□□□□ -0.21
CACNA1D-228ENST00000638120 ZNF18P17022 549 aa13.77□□□□□ -0.21
CACNA1D-228ENST00000638120 DGKZQ13574 1117 aa13.77□□□□□ -0.21
CACNA1D-228ENST00000638120 TMEM119Q4V9L6 283 aa13.77□□□□□ -0.21
CACNA1D-228ENST00000638120 CCDC186Q7Z3E2 898 aa13.77□□□□□ -0.21
CACNA1D-228ENST00000638120 SMYD4Q8IYR2 804 aaPredicted RBP13.77□□□□□ -0.21
CACNA1D-228ENST00000638120 ZKSCAN4Q969J2 545 aaPredicted RBP13.77□□□□□ -0.21
CACNA1D-228ENST00000638120 KLRG1Q96E93 195 aa13.77□□□□□ -0.21
CACNA1D-228ENST00000638120 CDK5RAP3Q96JB5 506 aa13.77□□□□□ -0.21
CACNA1D-228ENST00000638120 ZNF830Q96NB3 372 aaPredicted RBP13.77□□□□□ -0.21
CACNA1D-228ENST00000638120 TANGO6Q9C0B7 1094 aa13.77□□□□□ -0.21
CACNA1D-228ENST00000638120 KCNF1Q9H3M0 494 aa13.77□□□□□ -0.21
CACNA1D-228ENST00000638120 ADARB2Q9NS39 739 aaKnown RBP13.77□□□□□ -0.21
CACNA1D-228ENST00000638120 BLOC1S4Q9NUP1 217 aa13.77□□□□□ -0.21
CACNA1D-228ENST00000638120 FAM86B1E9PN63 330 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 SLC26A4O43511 780 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 ZNF500O60304 480 aaPredicted RBP13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 FAM86B2P0C5J1 330 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 PTGS1P23219 599 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 BACE1P56817 501 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 AMPD3Q01432 767 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 SPP2Q13103 211 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 SUPT20HL1Q3ZLR7 823 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 PRR16Q569H4 304 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 NOL9Q5SY16 702 aaKnown RBP13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 FCHSD1Q86WN1 690 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 ZNF280CQ8ND82 737 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 TBC1D5Q92609 795 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 GJA10Q969M2 543 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 C7orf25Q9BPX7 421 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 TRIM9Q9C026 710 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 EHMT1Q9H9B1 1298 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 SLC38A10Q9HBR0 1119 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 NRBP1Q9UHY1 535 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 CCPG1Q9ULG6 757 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 PPP1R9AQ9ULJ8 1098 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 KDM3AQ9Y4C1 1321 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 PAPPA2Q9BXP8 1791 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 RHOBTB3O94955 611 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 CCDC144BQ3MJ40 725 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 KMT5BQ4FZB7 885 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 HYIQ5T013 277 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 SPATA1Q5VX52 437 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 KLHL10Q6JEL2 608 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 C12orf42Q96LP6 360 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 AGBL1Q96MI9 1066 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 FAM20AQ96MK3 541 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 NUDT12Q9BQG2 462 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 RPAP3Q9H6T3 665 aaPredicted RBP13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 FZD1Q9UP38 647 aa13.76□□□□□ -0.21
CACNA1D-228ENST00000638120 POLR2AP24928 1970 aaKnown RBP13.75□□□□□ -0.21
CACNA1D-228ENST00000638120 CBFA2T2O43439 604 aa13.75□□□□□ -0.21
CACNA1D-228ENST00000638120 FLOT1O75955 427 aa13.75□□□□□ -0.21
CACNA1D-228ENST00000638120 SERPINC1P01008 464 aa13.75□□□□□ -0.21
CACNA1D-228ENST00000638120 HSD17B4P51659 736 aa13.75□□□□□ -0.21
CACNA1D-228ENST00000638120 SV2BQ7L1I2 683 aa13.75□□□□□ -0.21
CACNA1D-228ENST00000638120 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms