RNA–Protein interactions for RNA: ENST00000636337.1

SPTAN1-231, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-231	ENST00000636337	PARN	O95453	639 aa	Known RBP	11.77	□□□□□ -0.53
SPTAN1-231	ENST00000636337	PDGFB	P01127	241 aa	Predicted RBP	11.77	□□□□□ -0.53
SPTAN1-231	ENST00000636337	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
SPTAN1-231	ENST00000636337	TMED8	Q6PL24	325 aa	Predicted RBP	11.77	□□□□□ -0.53
SPTAN1-231	ENST00000636337	FBXO11	Q86XK2	927 aa		11.77	□□□□□ -0.53
SPTAN1-231	ENST00000636337	MYOCD	Q8IZQ8	938 aa		11.77	□□□□□ -0.53
SPTAN1-231	ENST00000636337	DHX38	Q92620	1227 aa	Known RBP	11.77	□□□□□ -0.53
SPTAN1-231	ENST00000636337	CTAGE1	Q96RT6	745 aa		11.77	□□□□□ -0.53
SPTAN1-231	ENST00000636337	WDR11	Q9BZH6	1224 aa		11.77	□□□□□ -0.53
SPTAN1-231	ENST00000636337	IGFLR1	Q9H665	355 aa		11.77	□□□□□ -0.53
SPTAN1-231	ENST00000636337	RNF146	Q9NTX7	359 aa		11.77	□□□□□ -0.53
SPTAN1-231	ENST00000636337	TLR7	Q9NYK1	1049 aa	Known RBP	11.77	□□□□□ -0.53
SPTAN1-231	ENST00000636337	DBNL	Q9UJU6	430 aa	Known RBP	11.77	□□□□□ -0.53
SPTAN1-231	ENST00000636337	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.77	□□□□□ -0.53
SPTAN1-231	ENST00000636337	CHD8	Q9HCK8	2581 aa		11.77	□□□□□ -0.53
SPTAN1-231	ENST00000636337	EP300	Q09472	2414 aa	Predicted RBP	11.76	□□□□□ -0.53
SPTAN1-231	ENST00000636337	PNMA6E	A0A0J9YXQ4	647 aa		11.76	□□□□□ -0.53
SPTAN1-231	ENST00000636337		F5H6K3	240 aa		11.76	□□□□□ -0.53
SPTAN1-231	ENST00000636337	AMH	P03971	560 aa		11.76	□□□□□ -0.53
SPTAN1-231	ENST00000636337	GNAI3	P08754	354 aa		11.76	□□□□□ -0.53
SPTAN1-231	ENST00000636337	KLRC3	Q07444	240 aa		11.76	□□□□□ -0.53
SPTAN1-231	ENST00000636337	CBX2	Q14781	532 aa	Predicted RBP	11.76	□□□□□ -0.53
SPTAN1-231	ENST00000636337	BRDT	Q58F21	947 aa	Predicted RBP	11.76	□□□□□ -0.53
SPTAN1-231	ENST00000636337	LCORL	Q8N3X6	602 aa		11.76	□□□□□ -0.53
SPTAN1-231	ENST00000636337	YME1L1	Q96TA2	773 aa		11.76	□□□□□ -0.53
SPTAN1-231	ENST00000636337	CHD6	Q8TD26	2715 aa		11.76	□□□□□ -0.53
SPTAN1-231	ENST00000636337	KPNA6	O60684	536 aa		11.75	□□□□□ -0.53
SPTAN1-231	ENST00000636337	CSPG5	O95196	566 aa		11.75	□□□□□ -0.53
SPTAN1-231	ENST00000636337	CKB	P12277	381 aa		11.75	□□□□□ -0.53
SPTAN1-231	ENST00000636337	NDUFV1	P49821	464 aa		11.75	□□□□□ -0.53
SPTAN1-231	ENST00000636337	OS9	Q13438	667 aa	Predicted RBP	11.75	□□□□□ -0.53
SPTAN1-231	ENST00000636337	MCTP2	Q6DN12	878 aa		11.75	□□□□□ -0.53
SPTAN1-231	ENST00000636337	GDF6	Q6KF10	455 aa	Predicted RBP	11.75	□□□□□ -0.53
SPTAN1-231	ENST00000636337	C16orf86	Q6ZW13	317 aa		11.75	□□□□□ -0.53
SPTAN1-231	ENST00000636337	PURB	Q96QR8	312 aa	Known RBP	11.75	□□□□□ -0.53
SPTAN1-231	ENST00000636337	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
SPTAN1-231	ENST00000636337	FEM1B	Q9UK73	627 aa		11.75	□□□□□ -0.53
SPTAN1-231	ENST00000636337	LCT	P09848	1927 aa		11.75	□□□□□ -0.53
SPTAN1-231	ENST00000636337	RAD50	Q92878	1312 aa		11.75	□□□□□ -0.53
SPTAN1-231	ENST00000636337	RALGAPA2	Q2PPJ7	1873 aa		11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	PRKAB2	O43741	272 aa		11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	EYA4	O95677	639 aa		11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	PDE6A	P16499	860 aa		11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	RBL2	Q08999	1139 aa		11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	ALDH1L2	Q3SY69	923 aa		11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	SLC9C2	Q5TAH2	1124 aa		11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	C12orf60	Q5U649	245 aa		11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	MSLNL	Q96KJ4	702 aa		11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	RPGRIP1	Q96KN7	1286 aa		11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	TRERF1	Q96PN7	1200 aa		11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	ARMT1	Q9H993	441 aa		11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	INCENP	Q9NQS7	918 aa		11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	CYP39A1	Q9NYL5	469 aa		11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	NOB1	Q9ULX3	412 aa	Known RBP	11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	GREB1L	Q9C091	1923 aa	Predicted RBP	11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337	ATRX	P46100	2492 aa		11.74	□□□□□ -0.53
SPTAN1-231	ENST00000636337		A6NJR5	290 aa		11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	GRM6	O15303	877 aa		11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	LGR5	O75473	907 aa		11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	FRYL	O94915	3013 aa		11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	ALAS1	P13196	640 aa		11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	CTNNB1	P35222	781 aa		11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	RRP1	P56182	461 aa	Known RBP	11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	ADAM15	Q13444	863 aa		11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	MBTPS1	Q14703	1052 aa		11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	PTPN21	Q16825	1174 aa		11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	AMOTL1	Q8IY63	956 aa		11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	TMEM105	Q8N8V8	129 aa		11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	SMRP1	Q8NCR6	262 aa		11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	MORC4	Q8TE76	937 aa		11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	RIPOR3	Q96MK2	946 aa		11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	API5	Q9BZZ5	524 aa	Known RBP	11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	ZNF532	Q9HCE3	1301 aa		11.73	□□□□□ -0.53
SPTAN1-231	ENST00000636337	UPP2	O95045	317 aa		11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	ICAM3	P32942	547 aa		11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	PPP2R5B	Q15173	497 aa		11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	MUM1L1	Q5H9M0	696 aa		11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	ZNF618	Q5T7W0	954 aa		11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	TRAF7	Q6Q0C0	670 aa		11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	NSMF	Q6X4W1	530 aa		11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	COPS5	Q92905	334 aa		11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	LMAN2L	Q9H0V9	348 aa		11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	ATP8A2	Q9NTI2	1148 aa		11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	CLEC1B	Q9P126	229 aa		11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	NYAP2	Q9P242	653 aa		11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	ISY1	Q9ULR0	285 aa	Known RBP	11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	USP15	Q9Y4E8	981 aa	Predicted RBP	11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	PKD1L2	Q7Z442	2459 aa		11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	MYH4	Q9Y623	1939 aa		11.72	□□□□□ -0.53
SPTAN1-231	ENST00000636337	MAP1B	P46821	2468 aa	Known RBP	11.71	□□□□□ -0.53
SPTAN1-231	ENST00000636337	CEP250	Q9BV73	2442 aa		11.71	□□□□□ -0.53
SPTAN1-231	ENST00000636337	RBM47	A0AV96	593 aa	Known RBP	11.71	□□□□□ -0.53
SPTAN1-231	ENST00000636337	GNAI2	P04899	355 aa		11.71	□□□□□ -0.53
SPTAN1-231	ENST00000636337	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
SPTAN1-231	ENST00000636337	TKFC	Q3LXA3	575 aa		11.71	□□□□□ -0.53
SPTAN1-231	ENST00000636337	ZBTB33	Q86T24	672 aa		11.71	□□□□□ -0.53
SPTAN1-231	ENST00000636337	SESTD1	Q86VW0	696 aa		11.71	□□□□□ -0.53
SPTAN1-231	ENST00000636337	KIAA2013	Q8IYS2	634 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms