RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 MICU3Q86XE3 530 aa11.91□□□□□ -0.5
CHD2-223ENST00000636306 SEPT12Q8IYM1 358 aa11.91□□□□□ -0.5
CHD2-223ENST00000636306 IGDCC4Q8TDY8 1250 aa11.91□□□□□ -0.5
CHD2-223ENST00000636306 MKL1Q969V6 931 aa11.91□□□□□ -0.5
CHD2-223ENST00000636306 CYFIP2Q96F07 1278 aa11.91□□□□□ -0.5
CHD2-223ENST00000636306 FAM84BQ96KN1 310 aaPredicted RBP11.91□□□□□ -0.5
CHD2-223ENST00000636306 ALG1Q9BT22 464 aa11.91□□□□□ -0.5
CHD2-223ENST00000636306 NUP58Q9BVL2 599 aa11.91□□□□□ -0.5
CHD2-223ENST00000636306 NFE2L3Q9Y4A8 694 aa11.91□□□□□ -0.5
CHD2-223ENST00000636306 XDHP47989 1333 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 CFAP73A6NFT4 308 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 SNAP23O00161 211 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 CALM1P0DP23 149 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 CALM2P0DP24 149 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 CALM3P0DP25 149 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 FDPSP14324 419 aaKnown RBP11.9□□□□□ -0.5
CHD2-223ENST00000636306 IBSPP21815 317 aaPredicted RBP11.9□□□□□ -0.5
CHD2-223ENST00000636306 FOSBP53539 338 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 GSTO1P78417 241 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 CTDSPL2Q05D32 466 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 SNX1Q13596 522 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 LAMB3Q13751 1172 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 SAFBQ15424 915 aaKnown RBP eCLIP11.9□□□□□ -0.5
CHD2-223ENST00000636306 KIAA0753Q2KHM9 967 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 ACCSLQ4AC99 568 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 FAM196AQ6ZSG2 479 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 ZNF804AQ7Z570 1209 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 SPATA21Q7Z572 469 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 NCAPG2Q86XI2 1143 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 KIRREL3Q8IZU9 778 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 MIGA1Q8NAN2 632 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 WDR66Q8TBY9 1149 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 NUP133Q8WUM0 1156 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 RPGRQ92834 1020 aaKnown RBP11.9□□□□□ -0.5
CHD2-223ENST00000636306 SENP2Q9HC62 589 aa11.9□□□□□ -0.5
CHD2-223ENST00000636306 GPHNQ9NQX3 736 aaPredicted RBP11.9□□□□□ -0.5
CHD2-223ENST00000636306 A0A0U1RQJ8 604 aa11.9□□□□□ -0.51
CHD2-223ENST00000636306 DNM1LO00429 736 aa11.9□□□□□ -0.51
CHD2-223ENST00000636306 TFRCP02786 760 aaKnown RBP11.9□□□□□ -0.51
CHD2-223ENST00000636306 IFNAR1P17181 557 aa11.9□□□□□ -0.51
CHD2-223ENST00000636306 NR1D1P20393 614 aa11.9□□□□□ -0.51
CHD2-223ENST00000636306 KCNQ4P56696 695 aa11.9□□□□□ -0.51
CHD2-223ENST00000636306 LMNB2Q03252 620 aa11.9□□□□□ -0.51
CHD2-223ENST00000636306 MYO1EQ12965 1108 aa11.9□□□□□ -0.51
CHD2-223ENST00000636306 RTN1Q16799 776 aa11.9□□□□□ -0.51
CHD2-223ENST00000636306 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.9□□□□□ -0.51
CHD2-223ENST00000636306 TMC4Q7Z404 712 aa11.9□□□□□ -0.51
CHD2-223ENST00000636306 MREGQ8N565 214 aa11.9□□□□□ -0.51
CHD2-223ENST00000636306 ATRIPQ8WXE1 791 aa11.9□□□□□ -0.51
CHD2-223ENST00000636306 RIOK1Q9BRS2 568 aaKnown RBP11.9□□□□□ -0.51
CHD2-223ENST00000636306 OSBPL7Q9BZF2 842 aa11.9□□□□□ -0.51
CHD2-223ENST00000636306 ATP8A2Q9NTI2 1148 aa11.9□□□□□ -0.51
CHD2-223ENST00000636306 ARPP21Q9UBL0 812 aaPredicted RBP11.9□□□□□ -0.51
CHD2-223ENST00000636306 LRRC37AA6NMS7 1700 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 MYH6P13533 1939 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 NAV1Q8NEY1 1877 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 GMNCA6NCL1 334 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 FMNL1O95466 1100 aaPredicted RBP11.89□□□□□ -0.51
CHD2-223ENST00000636306 ANP32DO95626 131 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 XBP1P17861 261 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 GUCY1B3Q02153 619 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 KIF23Q02241 960 aaPredicted RBP11.89□□□□□ -0.51
CHD2-223ENST00000636306 PDE4BQ07343 736 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 PNOCQ13519 176 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 RRP12Q5JTH9 1297 aaKnown RBP11.89□□□□□ -0.51
CHD2-223ENST00000636306 THEMIS2Q5TEJ8 643 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 NT5DC1Q5TFE4 455 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 RESP18Q5W5W9 173 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 C15orf52Q6ZUT6 534 aaKnown RBP11.89□□□□□ -0.51
CHD2-223ENST00000636306 ARHGAP22Q7Z5H3 698 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 DZIP1Q86YF9 867 aaKnown RBP11.89□□□□□ -0.51
CHD2-223ENST00000636306 GALNT15Q8N3T1 639 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 ACRBPQ8NEB7 543 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 B4GALNT2Q8NHY0 566 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 FAM81AQ8TBF8 368 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 STAMBPL1Q96FJ0 436 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 BICD1Q96G01 975 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 L3MBTL3Q96JM7 780 aaPredicted RBP11.89□□□□□ -0.51
CHD2-223ENST00000636306 TSC22D3Q99576 134 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 ZSWIM5Q9P217 1185 aa11.89□□□□□ -0.51
CHD2-223ENST00000636306 IQSEC3Q9UPP2 1182 aaPredicted RBP11.89□□□□□ -0.51
CHD2-223ENST00000636306 GOLGA6L10A6NI86 522 aa11.88□□□□□ -0.51
CHD2-223ENST00000636306 SSBP05455 408 aaKnown RBP eCLIP11.88□□□□□ -0.51
CHD2-223ENST00000636306 LINGO3P0C6S8 592 aa11.88□□□□□ -0.51
CHD2-223ENST00000636306 PTPN21Q16825 1174 aa11.88□□□□□ -0.51
CHD2-223ENST00000636306 HHATQ5VTY9 493 aa11.88□□□□□ -0.51
CHD2-223ENST00000636306 CACNA2D3Q8IZS8 1091 aa11.88□□□□□ -0.51
CHD2-223ENST00000636306 CAGE1Q8TC20 777 aa11.88□□□□□ -0.51
CHD2-223ENST00000636306 RBM17Q96I25 401 aaKnown RBP11.88□□□□□ -0.51
CHD2-223ENST00000636306 PAPOLBQ9NRJ5 636 aaKnown RBP11.88□□□□□ -0.51
CHD2-223ENST00000636306 ZFATQ9P243 1243 aa11.88□□□□□ -0.51
CHD2-223ENST00000636306 MAN1B1Q9UKM7 699 aa11.88□□□□□ -0.51
CHD2-223ENST00000636306 PCDHA5Q9Y5H7 936 aa11.88□□□□□ -0.51
CHD2-223ENST00000636306 BAZ2AQ9UIF9 1905 aaKnown RBP11.88□□□□□ -0.51
CHD2-223ENST00000636306 SPDYE3A6NKU9 549 aa11.87□□□□□ -0.51
CHD2-223ENST00000636306 MINDY4BA8MYZ0 360 aa11.87□□□□□ -0.51
CHD2-223ENST00000636306 E7EVH7 732 aa11.87□□□□□ -0.51
CHD2-223ENST00000636306 PPIP5K2O43314 1243 aa11.87□□□□□ -0.51
CHD2-223ENST00000636306 PRKAB2O43741 272 aa11.87□□□□□ -0.51
CHD2-223ENST00000636306 DEXIO95424 95 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms