RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 A6NJR5 290 aa19.71■□□□□ 0.75
TARDBP-225ENST00000621715 IQCF3P0C7M6 154 aa19.71■□□□□ 0.75
TARDBP-225ENST00000621715 GOLGA8HP0CJ92 632 aa19.71■□□□□ 0.75
TARDBP-225ENST00000621715 BMP1P13497 986 aa19.71■□□□□ 0.75
TARDBP-225ENST00000621715 CPT1AP50416 773 aa19.71■□□□□ 0.75
TARDBP-225ENST00000621715 NMIQ13287 307 aaPredicted RBP19.71■□□□□ 0.75
TARDBP-225ENST00000621715 FAM47CQ5HY64 1035 aa19.71■□□□□ 0.75
TARDBP-225ENST00000621715 COL20A1Q9P218 1284 aa19.71■□□□□ 0.75
TARDBP-225ENST00000621715 MTCH2Q9Y6C9 303 aa19.71■□□□□ 0.75
TARDBP-225ENST00000621715 COL4A4P53420 1690 aaPredicted RBP19.71■□□□□ 0.75
TARDBP-225ENST00000621715 BRWD1Q9NSI6 2320 aa19.7■□□□□ 0.74
TARDBP-225ENST00000621715 PPP2R5BQ15173 497 aa19.7■□□□□ 0.74
TARDBP-225ENST00000621715 MCMDC2Q4G0Z9 681 aa19.7■□□□□ 0.74
TARDBP-225ENST00000621715 TMCO2Q7Z6W1 182 aaPredicted RBP19.7■□□□□ 0.74
TARDBP-225ENST00000621715 ZKSCAN3Q9BRR0 538 aa19.7■□□□□ 0.74
TARDBP-225ENST00000621715 KIAA1217Q5T5P2 1943 aa19.7■□□□□ 0.74
TARDBP-225ENST00000621715 NEDD4P46934 1319 aa19.7■□□□□ 0.74
TARDBP-225ENST00000621715 LOC102724159A0A0B4J2E5 919 aa19.69■□□□□ 0.74
TARDBP-225ENST00000621715 SUPT20HL2P0C7V6 817 aa19.69■□□□□ 0.74
TARDBP-225ENST00000621715 TAP1Q03518 808 aa19.69■□□□□ 0.74
TARDBP-225ENST00000621715 PDE4DQ08499 809 aa19.69■□□□□ 0.74
TARDBP-225ENST00000621715 PWP2Q15269 919 aaKnown RBP19.69■□□□□ 0.74
TARDBP-225ENST00000621715 TCTN1Q2MV58 587 aa19.69■□□□□ 0.74
TARDBP-225ENST00000621715 USH1GQ495M9 461 aa19.69■□□□□ 0.74
TARDBP-225ENST00000621715 TMEM67Q5HYA8 995 aa19.69■□□□□ 0.74
TARDBP-225ENST00000621715 NFRKBQ6P4R8 1299 aa19.69■□□□□ 0.74
TARDBP-225ENST00000621715 CCDC62Q6P9F0 684 aa19.69■□□□□ 0.74
TARDBP-225ENST00000621715 UBA5Q9GZZ9 404 aa19.69■□□□□ 0.74
TARDBP-225ENST00000621715 WDR19Q8NEZ3 1342 aa19.69■□□□□ 0.74
TARDBP-225ENST00000621715 LAMA4Q16363 1823 aa19.69■□□□□ 0.74
TARDBP-225ENST00000621715 PFKMP08237 780 aa19.68■□□□□ 0.74
TARDBP-225ENST00000621715 TXNP10599 105 aaKnown RBP19.68■□□□□ 0.74
TARDBP-225ENST00000621715 SCFD2Q8WU76 684 aa19.68■□□□□ 0.74
TARDBP-225ENST00000621715 DHX38Q92620 1227 aaKnown RBP19.68■□□□□ 0.74
TARDBP-225ENST00000621715 CRBNQ96SW2 442 aa19.68■□□□□ 0.74
TARDBP-225ENST00000621715 ZMYM6O95789 1325 aa19.68■□□□□ 0.74
TARDBP-225ENST00000621715 MYH6P13533 1939 aa19.67■□□□□ 0.74
TARDBP-225ENST00000621715 LCHNA4D1U4 455 aa19.67■□□□□ 0.74
TARDBP-225ENST00000621715 PITPNM1O00562 1244 aa19.67■□□□□ 0.74
TARDBP-225ENST00000621715 POU3F3P20264 500 aaPredicted RBP19.67■□□□□ 0.74
TARDBP-225ENST00000621715 CHMP4BP1P59074 171 aa19.67■□□□□ 0.74
TARDBP-225ENST00000621715 AFG1LQ8WV93 481 aa19.67■□□□□ 0.74
TARDBP-225ENST00000621715 KAT2BQ92831 832 aa19.67■□□□□ 0.74
TARDBP-225ENST00000621715 GPHNQ9NQX3 736 aaPredicted RBP19.67■□□□□ 0.74
TARDBP-225ENST00000621715 LPXNO60711 386 aa19.66■□□□□ 0.74
TARDBP-225ENST00000621715 ARHGAP1Q07960 439 aa19.66■□□□□ 0.74
TARDBP-225ENST00000621715 LY6KQ17RY6 165 aa19.66■□□□□ 0.74
TARDBP-225ENST00000621715 GDF6Q6KF10 455 aaPredicted RBP19.66■□□□□ 0.74
TARDBP-225ENST00000621715 HERC6Q8IVU3 1022 aa19.66■□□□□ 0.74
TARDBP-225ENST00000621715 DNERQ8NFT8 737 aa19.66■□□□□ 0.74
TARDBP-225ENST00000621715 ARNTL2Q8WYA1 636 aa19.66■□□□□ 0.74
TARDBP-225ENST00000621715 TAAR1Q96RJ0 339 aa19.66■□□□□ 0.74
TARDBP-225ENST00000621715 CCDC171Q6TFL3 1326 aa19.66■□□□□ 0.74
TARDBP-225ENST00000621715 NKRFO15226 690 aaKnown RBP eCLIP19.65■□□□□ 0.74
TARDBP-225ENST00000621715 SYTL5Q8TDW5 730 aaPredicted RBP19.65■□□□□ 0.74
TARDBP-225ENST00000621715 TTC14Q96N46 770 aa19.65■□□□□ 0.74
TARDBP-225ENST00000621715 SLC9A7Q96T83 725 aa19.65■□□□□ 0.74
TARDBP-225ENST00000621715 MYH7BA7E2Y1 1941 aa19.64■□□□□ 0.74
TARDBP-225ENST00000621715 MMP3P08254 477 aa19.64■□□□□ 0.73
TARDBP-225ENST00000621715 RFC2P35250 354 aa19.64■□□□□ 0.73
TARDBP-225ENST00000621715 RRP1P56182 461 aaKnown RBP19.64■□□□□ 0.73
TARDBP-225ENST00000621715 CDC37Q16543 378 aaPredicted RBP19.64■□□□□ 0.73
TARDBP-225ENST00000621715 PTGISQ16647 500 aa19.64■□□□□ 0.73
TARDBP-225ENST00000621715 MFSD6Q6ZSS7 791 aa19.64■□□□□ 0.73
TARDBP-225ENST00000621715 SEPT14Q6ZU15 432 aa19.64■□□□□ 0.73
TARDBP-225ENST00000621715 WNT8BQ93098 351 aa19.64■□□□□ 0.73
TARDBP-225ENST00000621715 FTOQ9C0B1 505 aaKnown RBP eCLIP19.64■□□□□ 0.73
TARDBP-225ENST00000621715 RAD50Q92878 1312 aa19.63■□□□□ 0.73
TARDBP-225ENST00000621715 DEFB103AP81534 67 aa19.63■□□□□ 0.73
TARDBP-225ENST00000621715 PTPN11Q06124 597 aaPredicted RBP19.63■□□□□ 0.73
TARDBP-225ENST00000621715 GRB10Q13322 594 aa19.63■□□□□ 0.73
TARDBP-225ENST00000621715 SKIV2LQ15477 1246 aaKnown RBP19.63■□□□□ 0.73
TARDBP-225ENST00000621715 RGS22Q8NE09 1264 aa19.63■□□□□ 0.73
TARDBP-225ENST00000621715 PHOSPHO2Q8TCD6 241 aa19.63■□□□□ 0.73
TARDBP-225ENST00000621715 LNPKQ9C0E8 428 aa19.63■□□□□ 0.73
TARDBP-225ENST00000621715 OPLAHO14841 1288 aa19.62■□□□□ 0.73
TARDBP-225ENST00000621715 KPNA6O60684 536 aa19.62■□□□□ 0.73
TARDBP-225ENST00000621715 NBNO60934 754 aa19.62■□□□□ 0.73
TARDBP-225ENST00000621715 ACTN1P12814 892 aa19.62■□□□□ 0.73
TARDBP-225ENST00000621715 WDR5P61964 334 aaKnown RBP19.62■□□□□ 0.73
TARDBP-225ENST00000621715 HDAC1Q13547 482 aaPredicted RBP19.62■□□□□ 0.73
TARDBP-225ENST00000621715 HIC1Q14526 733 aa19.62■□□□□ 0.73
TARDBP-225ENST00000621715 CHST3Q7LGC8 479 aa19.62■□□□□ 0.73
TARDBP-225ENST00000621715 ADGRF4Q8IZF3 695 aa19.62■□□□□ 0.73
TARDBP-225ENST00000621715 RETREG2Q8NC44 543 aa19.62■□□□□ 0.73
TARDBP-225ENST00000621715 BFSP2Q13515 415 aa19.61■□□□□ 0.73
TARDBP-225ENST00000621715 QRICH1Q2TAL8 776 aa19.61■□□□□ 0.73
TARDBP-225ENST00000621715 BRDTQ58F21 947 aaPredicted RBP19.61■□□□□ 0.73
TARDBP-225ENST00000621715 GPATCH4Q5T3I0 446 aaKnown RBP19.61■□□□□ 0.73
TARDBP-225ENST00000621715 TRAF7Q6Q0C0 670 aa19.61■□□□□ 0.73
TARDBP-225ENST00000621715 SESTD1Q86VW0 696 aa19.61■□□□□ 0.73
TARDBP-225ENST00000621715 PNMA1Q8ND90 353 aa19.61■□□□□ 0.73
TARDBP-225ENST00000621715 KHSRPQ92945 711 aaKnown RBP eCLIP19.61■□□□□ 0.731e-9■□□□□ 10.4
TARDBP-225ENST00000621715 TRIM6-TRIM34B2RNG4 842 aa19.6■□□□□ 0.73
TARDBP-225ENST00000621715 TLL1O43897 1013 aa19.6■□□□□ 0.73
TARDBP-225ENST00000621715 KDM4AO75164 1064 aa19.6■□□□□ 0.73
TARDBP-225ENST00000621715 SDSP20132 328 aa19.6■□□□□ 0.73
TARDBP-225ENST00000621715 ZNF200P98182 395 aaPredicted RBP19.6■□□□□ 0.73
TARDBP-225ENST00000621715 MBTPS1Q14703 1052 aa19.6■□□□□ 0.73
TARDBP-225ENST00000621715 DGKHQ86XP1 1220 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms