RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 CHURC1Q8WUH1 139 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 WDR24Q96S15 920 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 TSKSQ9UJT2 592 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.51■□□□□ 0.07
SSBP2-220ENST00000615665 STXBP3O00186 592 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 GDF11O95390 407 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 CYP4A11Q02928 519 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 PSMD2Q13200 908 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 NDST4Q9H3R1 872 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 NHEJ1Q9H9Q4 299 aaPredicted RBP15.51■□□□□ 0.07
SSBP2-220ENST00000615665 AFF2P51816 1311 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 GAS7O60861 476 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 SEMA3FQ13275 785 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 FMNL3Q8IVF7 1028 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 FOXP4Q8IVH2 680 aaPredicted RBP15.51■□□□□ 0.07
SSBP2-220ENST00000615665 BICD1Q96G01 975 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 STK32BQ9NY57 414 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 PCDHB13Q9Y5F0 798 aa15.51■□□□□ 0.07
SSBP2-220ENST00000615665 SCN11AQ9UI33 1791 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 IVLP07476 585 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 CACNB1Q02641 598 aaPredicted RBP15.5■□□□□ 0.07
SSBP2-220ENST00000615665 LRRC63Q05C16 580 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 ZNF710Q8N1W2 664 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 CNKSR1Q969H4 720 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 HYOU1Q9Y4L1 999 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 CCDC151A5D8V7 595 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 ZBTB5O15062 677 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 AKR1B1P15121 316 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 PPP4CP60510 307 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 PABPC4Q13310 644 aaKnown RBP eCLIP15.5■□□□□ 0.074e-7■□□□□ 9.1
SSBP2-220ENST00000615665 SEPT2Q15019 361 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 LONRF2Q1L5Z9 754 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 PPP4R3AQ6IN85 833 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 C16orf86Q6ZW13 317 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 USP37Q86T82 979 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 RGPD5Q99666 1765 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 ADAMTSL3P82987 1691 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 KCPQ6ZWJ8 1503 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 WTIPA6NIX2 430 aaPredicted RBP15.5■□□□□ 0.07
SSBP2-220ENST00000615665 TCP10L2B9ZVM9 353 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 DDX39AO00148 427 aaKnown RBP15.5■□□□□ 0.07
SSBP2-220ENST00000615665 RNASE9P60153 205 aaKnown RBP15.5■□□□□ 0.07
SSBP2-220ENST00000615665 CDC37Q16543 378 aaPredicted RBP15.5■□□□□ 0.07
SSBP2-220ENST00000615665 ANKRD13CQ8N6S4 541 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 JDP2Q8WYK2 163 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 DAGLAQ9Y4D2 1042 aa15.5■□□□□ 0.07
SSBP2-220ENST00000615665 PDS5AQ29RF7 1337 aaKnown RBP15.5■□□□□ 0.07
SSBP2-220ENST00000615665 TTC26A0AVF1 554 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 CFAP221Q4G0U5 840 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 SPICE1Q8N0Z3 855 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 ADSSL1Q8N142 457 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 TMEM60Q9H2L4 133 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 COL4A3BPQ9Y5P4 624 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 PPP1R3GB7ZBB8 358 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 FLOT1O75955 427 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 HOXA7P31268 230 aaPredicted RBP15.49■□□□□ 0.07
SSBP2-220ENST00000615665 CACNB3P54284 484 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 PPP1R18Q6NYC8 613 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 DDX12PQ92771 950 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 CSRNP1Q96S65 589 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 PNMA6AP0CW24 399 aaPredicted RBP15.49■□□□□ 0.07
SSBP2-220ENST00000615665 TCP1P17987 556 aaKnown RBP15.49■□□□□ 0.07
SSBP2-220ENST00000615665 CYP27A1Q02318 531 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 ANO3Q9BYT9 981 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 MAD2L2Q9UI95 211 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 PVALEFA0A1B0GWK0 134 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 TDP2O95551 362 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 MMP10P09238 476 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 PLA2G4BP0C869 781 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 CRKP46108 304 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 DMTNQ08495 405 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 KIAA0753Q2KHM9 967 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 UTP14CQ5TAP6 766 aaKnown RBP15.49■□□□□ 0.07
SSBP2-220ENST00000615665 TAX1BP1Q86VP1 789 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 SP8Q8IXZ3 490 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 SMCR8Q8TEV9 937 aaPredicted RBP15.49■□□□□ 0.07
SSBP2-220ENST00000615665 TRIM9Q9C026 710 aa15.49■□□□□ 0.07
SSBP2-220ENST00000615665 FAM237AA0A1B0GTK4 181 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 CETN2P41208 172 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 EARS2Q5JPH6 523 aaKnown RBP15.48■□□□□ 0.07
SSBP2-220ENST00000615665 SLC27A3Q5K4L6 730 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 USP17L10C9JJH3 530 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 GCOM1H8Y6P7 765 aaPredicted RBP15.48■□□□□ 0.07
SSBP2-220ENST00000615665 BUB1O43683 1085 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 POLR2MP0CAP2 368 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 BMP3P12645 472 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 NR2F2P24468 414 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 FXR1P51114 621 aaKnown RBP eCLIP15.48■□□□□ 0.07
SSBP2-220ENST00000615665 MAEAQ7L5Y9 396 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 GDAP1L1Q96MZ0 367 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 MTMR4Q9NYA4 1195 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 GPR75-ASB3A0A0A6YYF3 556 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 CFAP58Q5T655 872 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 CPXCR1Q8N123 301 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 FAM76AQ8TAV0 307 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 MASTLQ96GX5 879 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 CRAMP1Q96RY5 1269 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 FAM107BQ9H098 131 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 TAOK3Q9H2K8 898 aa15.48■□□□□ 0.07
SSBP2-220ENST00000615665 MRFAP1Q9Y605 127 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms