RNA–Protein interactions for RNA: ENST00000610455.4

DEF8-228, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 1 (best) BASIC

Gene DEF8, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-228ENST00000610455 BDP1A6H8Y1 2624 aa20.53■□□□□ 0.88
DEF8-228ENST00000610455 A6NJR5 290 aa20.53■□□□□ 0.88
DEF8-228ENST00000610455 RFXAPO00287 272 aa20.53■□□□□ 0.88
DEF8-228ENST00000610455 NKRFO15226 690 aaKnown RBP eCLIP20.53■□□□□ 0.884e-7■■■□□ 16.8
DEF8-228ENST00000610455 IQCF3P0C7M6 154 aa20.53■□□□□ 0.88
DEF8-228ENST00000610455 BRDTQ58F21 947 aaPredicted RBP20.53■□□□□ 0.88
DEF8-228ENST00000610455 DNERQ8NFT8 737 aa20.53■□□□□ 0.88
DEF8-228ENST00000610455 SCFD2Q8WU76 684 aa20.53■□□□□ 0.88
DEF8-228ENST00000610455 CERS4Q9HA82 394 aa20.53■□□□□ 0.88
DEF8-228ENST00000610455 ZMYM6O95789 1325 aa20.53■□□□□ 0.88
DEF8-228ENST00000610455 WDR19Q8NEZ3 1342 aa20.53■□□□□ 0.88
DEF8-228ENST00000610455 SNHG28P0DPA3 235 aa20.52■□□□□ 0.88
DEF8-228ENST00000610455 TXNP10599 105 aaKnown RBP20.52■□□□□ 0.88
DEF8-228ENST00000610455 TFF2Q03403 129 aa20.52■□□□□ 0.88
DEF8-228ENST00000610455 NMIQ13287 307 aaPredicted RBP20.52■□□□□ 0.88
DEF8-228ENST00000610455 IL27Q8NEV9 243 aa20.52■□□□□ 0.88
DEF8-228ENST00000610455 TTC14Q96N46 770 aa20.52■□□□□ 0.88
DEF8-228ENST00000610455 MPHOSPH6Q99547 160 aaKnown RBP20.52■□□□□ 0.88
DEF8-228ENST00000610455 TSPYL2Q9H2G4 693 aaPredicted RBP20.52■□□□□ 0.88
DEF8-228ENST00000610455 CPVLQ9H3G5 476 aa20.52■□□□□ 0.88
DEF8-228ENST00000610455 RAPGEFL1Q9UHV5 662 aa20.52■□□□□ 0.88
DEF8-228ENST00000610455 PNMA2Q9UL42 364 aa20.52■□□□□ 0.88
DEF8-228ENST00000610455 EPOPA6NHQ4 379 aa20.51■□□□□ 0.87
DEF8-228ENST00000610455 PITPNM1O00562 1244 aa20.51■□□□□ 0.87
DEF8-228ENST00000610455 KPNA6O60684 536 aa20.51■□□□□ 0.87
DEF8-228ENST00000610455 ARIH2O95376 493 aa20.51■□□□□ 0.87
DEF8-228ENST00000610455 GOLGA8HP0CJ92 632 aa20.51■□□□□ 0.87
DEF8-228ENST00000610455 ACTN1P12814 892 aa20.51■□□□□ 0.87
DEF8-228ENST00000610455 RFC2P35250 354 aa20.51■□□□□ 0.87
DEF8-228ENST00000610455 USH1GQ495M9 461 aa20.51■□□□□ 0.87
DEF8-228ENST00000610455 MFSD6Q6ZSS7 791 aa20.51■□□□□ 0.87
DEF8-228ENST00000610455 TBC1D10CQ8IV04 446 aa20.51■□□□□ 0.87
DEF8-228ENST00000610455 NECAB3Q96P71 396 aaPredicted RBP20.51■□□□□ 0.87
DEF8-228ENST00000610455 ARHGEF15O94989 841 aa20.5■□□□□ 0.87
DEF8-228ENST00000610455 BMP1P13497 986 aa20.5■□□□□ 0.87
DEF8-228ENST00000610455 CHMP4BP1P59074 171 aa20.5■□□□□ 0.87
DEF8-228ENST00000610455 RETREG2Q8NC44 543 aa20.5■□□□□ 0.87
DEF8-228ENST00000610455 SLC9A7Q96T83 725 aa20.5■□□□□ 0.87
DEF8-228ENST00000610455 ZKSCAN3Q9BRR0 538 aa20.5■□□□□ 0.87
DEF8-228ENST00000610455 FTOQ9C0B1 505 aaKnown RBP eCLIP20.5■□□□□ 0.875e-6■□□□□ 9.5
DEF8-228ENST00000610455 MTCH2Q9Y6C9 303 aa20.5■□□□□ 0.87
DEF8-228ENST00000610455 CCDC171Q6TFL3 1326 aa20.5■□□□□ 0.87
DEF8-228ENST00000610455 PTPN11Q06124 597 aaPredicted RBP20.49■□□□□ 0.87
DEF8-228ENST00000610455 SKIV2LQ15477 1246 aaKnown RBP20.49■□□□□ 0.87
DEF8-228ENST00000610455 KRT40Q6A162 431 aa20.49■□□□□ 0.87
DEF8-228ENST00000610455 PHOSPHO2Q8TCD6 241 aa20.49■□□□□ 0.87
DEF8-228ENST00000610455 TBC1D5Q92609 795 aa20.49■□□□□ 0.87
DEF8-228ENST00000610455 UBA5Q9GZZ9 404 aa20.49■□□□□ 0.87
DEF8-228ENST00000610455 NEDD4P46934 1319 aa20.49■□□□□ 0.87
DEF8-228ENST00000610455 B4DLN1 442 aa20.48■□□□□ 0.87
DEF8-228ENST00000610455 PCP11498 1178 aaKnown RBP20.48■□□□□ 0.87
DEF8-228ENST00000610455 POU3F3P20264 500 aaPredicted RBP20.48■□□□□ 0.87
DEF8-228ENST00000610455 KCNQ1P51787 676 aa20.48■□□□□ 0.87
DEF8-228ENST00000610455 MRPL12P52815 198 aaKnown RBP20.48■□□□□ 0.87
DEF8-228ENST00000610455 TAP1Q03518 808 aa20.48■□□□□ 0.87
DEF8-228ENST00000610455 BFSP2Q13515 415 aa20.48■□□□□ 0.87
DEF8-228ENST00000610455 GPATCH4Q5T3I0 446 aaKnown RBP20.48■□□□□ 0.87
DEF8-228ENST00000610455 CCDC62Q6P9F0 684 aa20.48■□□□□ 0.87
DEF8-228ENST00000610455 HERC6Q8IVU3 1022 aa20.48■□□□□ 0.87
DEF8-228ENST00000610455 RGS22Q8NE09 1264 aa20.48■□□□□ 0.87
DEF8-228ENST00000610455 CTAGE1Q96RT6 745 aa20.48■□□□□ 0.87
DEF8-228ENST00000610455 NOD1Q9Y239 953 aa20.48■□□□□ 0.87
DEF8-228ENST00000610455 SIP14410 1827 aa20.48■□□□□ 0.87
DEF8-228ENST00000610455 TRIM6-TRIM34B2RNG4 842 aa20.47■□□□□ 0.87
DEF8-228ENST00000610455 PTGISQ16647 500 aa20.47■□□□□ 0.87
DEF8-228ENST00000610455 LY6KQ17RY6 165 aa20.47■□□□□ 0.87
DEF8-228ENST00000610455 TICAM2Q86XR7 235 aa20.47■□□□□ 0.87
DEF8-228ENST00000610455 AFG1LQ8WV93 481 aa20.47■□□□□ 0.87
DEF8-228ENST00000610455 ARNTL2Q8WYA1 636 aa20.47■□□□□ 0.87
DEF8-228ENST00000610455 TAAR1Q96RJ0 339 aa20.47■□□□□ 0.87
DEF8-228ENST00000610455 CRBNQ96SW2 442 aa20.47■□□□□ 0.87
DEF8-228ENST00000610455 COL20A1Q9P218 1284 aa20.47■□□□□ 0.87
DEF8-228ENST00000610455 GTPBP6O43824 516 aaPredicted RBP20.46■□□□□ 0.87
DEF8-228ENST00000610455 MMP3P08254 477 aa20.46■□□□□ 0.87
DEF8-228ENST00000610455 RRP1P56182 461 aaKnown RBP20.46■□□□□ 0.87
DEF8-228ENST00000610455 HDAC1Q13547 482 aaPredicted RBP20.46■□□□□ 0.87
DEF8-228ENST00000610455 CDC37Q16543 378 aaPredicted RBP20.46■□□□□ 0.87
DEF8-228ENST00000610455 GDF6Q6KF10 455 aaPredicted RBP20.46■□□□□ 0.87
DEF8-228ENST00000610455 SEPT14Q6ZU15 432 aa20.46■□□□□ 0.87
DEF8-228ENST00000610455 SPRED2Q7Z698 418 aa20.46■□□□□ 0.87
DEF8-228ENST00000610455 ESR2Q92731 530 aa20.46■□□□□ 0.87
DEF8-228ENST00000610455 RILPL2Q969X0 211 aa20.46■□□□□ 0.87
DEF8-228ENST00000610455 RNF41Q9H4P4 317 aaPredicted RBP20.46■□□□□ 0.87
DEF8-228ENST00000610455 ARHGAP1Q07960 439 aa20.45■□□□□ 0.86
DEF8-228ENST00000610455 GPNMBQ14956 572 aa20.45■□□□□ 0.86
DEF8-228ENST00000610455 AAK1Q2M2I8 961 aa20.45■□□□□ 0.86
DEF8-228ENST00000610455 CHST3Q7LGC8 479 aa20.45■□□□□ 0.86
DEF8-228ENST00000610455 DGKHQ86XP1 1220 aa20.45■□□□□ 0.86
DEF8-228ENST00000610455 SYTL5Q8TDW5 730 aaPredicted RBP20.45■□□□□ 0.86
DEF8-228ENST00000610455 KAT2BQ92831 832 aa20.45■□□□□ 0.86
DEF8-228ENST00000610455 LNPKQ9C0E8 428 aa20.45■□□□□ 0.86
DEF8-228ENST00000610455 KIF28PB7ZC32 967 aa20.44■□□□□ 0.86
DEF8-228ENST00000610455 RBAK-RBAKDNI3L0D1 243 aa20.44■□□□□ 0.86
DEF8-228ENST00000610455 BAIAP3O94812 1187 aa20.44■□□□□ 0.86
DEF8-228ENST00000610455 GH1P01241 217 aa20.44■□□□□ 0.86
DEF8-228ENST00000610455 TMCO2Q7Z6W1 182 aaPredicted RBP20.44■□□□□ 0.86
DEF8-228ENST00000610455 SESTD1Q86VW0 696 aa20.44■□□□□ 0.86
DEF8-228ENST00000610455 ADGRF4Q8IZF3 695 aa20.44■□□□□ 0.86
DEF8-228ENST00000610455 PNMA1Q8ND90 353 aa20.44■□□□□ 0.86
DEF8-228ENST00000610455 CAGE1Q8TC20 777 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms