RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 NECAB1Q8N987 351 aa17.25■□□□□ 0.35
CSNK2A1-209ENST00000609606 TRPV1Q8NER1 839 aa17.25■□□□□ 0.35
CSNK2A1-209ENST00000609606 CCDC12Q8WUD4 166 aaPredicted RBP17.25■□□□□ 0.35
CSNK2A1-209ENST00000609606 CUL5Q93034 780 aa17.25■□□□□ 0.35
CSNK2A1-209ENST00000609606 IWS1Q96ST2 819 aa17.25■□□□□ 0.35
CSNK2A1-209ENST00000609606 TMEM106CQ9BVX2 250 aa17.25■□□□□ 0.35
CSNK2A1-209ENST00000609606 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.25■□□□□ 0.358e-7■□□□□ 8.6
CSNK2A1-209ENST00000609606 RNF208Q9H0X6 261 aa17.25■□□□□ 0.35
CSNK2A1-209ENST00000609606 ABHD16BQ9H3Z7 469 aa17.25■□□□□ 0.35
CSNK2A1-209ENST00000609606 SH3GLB2Q9NR46 395 aa17.25■□□□□ 0.35
CSNK2A1-209ENST00000609606 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.25■□□□□ 0.35
CSNK2A1-209ENST00000609606 BRCA2P51587 3418 aa17.24■□□□□ 0.35
CSNK2A1-209ENST00000609606 FRMPD3Q5JV73 1810 aa17.24■□□□□ 0.35
CSNK2A1-209ENST00000609606 HOXA13P31271 388 aaPredicted RBP17.24■□□□□ 0.35
CSNK2A1-209ENST00000609606 TAAR1Q96RJ0 339 aa17.24■□□□□ 0.35
CSNK2A1-209ENST00000609606 RMDN3Q96TC7 470 aa17.24■□□□□ 0.35
CSNK2A1-209ENST00000609606 KATNBL1Q9H079 304 aa17.24■□□□□ 0.35
CSNK2A1-209ENST00000609606 RIC8AQ9NPQ8 531 aa17.24■□□□□ 0.35
CSNK2A1-209ENST00000609606 PXMP2Q9NR77 195 aa17.24■□□□□ 0.35
CSNK2A1-209ENST00000609606 FRMPD4Q14CM0 1322 aa17.23■□□□□ 0.35
CSNK2A1-209ENST00000609606 KIAA1217Q5T5P2 1943 aa17.23■□□□□ 0.35
CSNK2A1-209ENST00000609606 CCDC85CA6NKD9 419 aa17.23■□□□□ 0.35
CSNK2A1-209ENST00000609606 SEPT4O43236 478 aa17.23■□□□□ 0.35
CSNK2A1-209ENST00000609606 MSCO60682 206 aa17.23■□□□□ 0.35
CSNK2A1-209ENST00000609606 CAPN15O75808 1086 aa17.23■□□□□ 0.35
CSNK2A1-209ENST00000609606 ZNF865P0CJ78 1059 aaPredicted RBP17.23■□□□□ 0.35
CSNK2A1-209ENST00000609606 CCND3P30281 292 aaPredicted RBP17.23■□□□□ 0.35
CSNK2A1-209ENST00000609606 ST3GAL1Q11201 340 aa17.23■□□□□ 0.35
CSNK2A1-209ENST00000609606 PRAMEF19Q5SWL8 479 aa17.23■□□□□ 0.35
CSNK2A1-209ENST00000609606 CCDC148Q8NFR7 591 aa17.23■□□□□ 0.35
CSNK2A1-209ENST00000609606 SMARCC2Q8TAQ2 1214 aa17.23■□□□□ 0.35
CSNK2A1-209ENST00000609606 LLPHQ9BRT6 129 aaKnown RBP17.23■□□□□ 0.35
CSNK2A1-209ENST00000609606 ZMYND12Q9H0C1 365 aa17.23■□□□□ 0.35
CSNK2A1-209ENST00000609606 VTA1Q9NP79 307 aa17.23■□□□□ 0.35
CSNK2A1-209ENST00000609606 SMCO2A6NFE2 343 aa17.22■□□□□ 0.35
CSNK2A1-209ENST00000609606 PPFIA3O75145 1194 aa17.22■□□□□ 0.35
CSNK2A1-209ENST00000609606 MYCP01106 439 aaPredicted RBP17.22■□□□□ 0.35
CSNK2A1-209ENST00000609606 GJA8P48165 433 aa17.22■□□□□ 0.35
CSNK2A1-209ENST00000609606 ADCY7P51828 1080 aa17.22■□□□□ 0.35
CSNK2A1-209ENST00000609606 PDE4DQ08499 809 aa17.22■□□□□ 0.35
CSNK2A1-209ENST00000609606 ACVR2BQ13705 512 aa17.22■□□□□ 0.35
CSNK2A1-209ENST00000609606 ARHGEF16Q5VV41 709 aa17.22■□□□□ 0.35
CSNK2A1-209ENST00000609606 USP17L6PQ6QN14 398 aa17.22■□□□□ 0.35
CSNK2A1-209ENST00000609606 NSUN7Q8NE18 718 aaKnown RBP17.22■□□□□ 0.35
CSNK2A1-209ENST00000609606 WASF1Q92558 559 aa17.22■□□□□ 0.35
CSNK2A1-209ENST00000609606 CD2BP2O95400 341 aaKnown RBP17.21■□□□□ 0.35
CSNK2A1-209ENST00000609606 GNA11P29992 359 aa17.21■□□□□ 0.35
CSNK2A1-209ENST00000609606 FCHSD1Q86WN1 690 aa17.21■□□□□ 0.35
CSNK2A1-209ENST00000609606 DEFB118Q96PH6 123 aa17.21■□□□□ 0.35
CSNK2A1-209ENST00000609606 PDCD2LQ9BRP1 358 aa17.21■□□□□ 0.35
CSNK2A1-209ENST00000609606 CRISPLD2Q9H0B8 497 aa17.21■□□□□ 0.35
CSNK2A1-209ENST00000609606 C6orf50Q9HD87 102 aa17.21■□□□□ 0.35
CSNK2A1-209ENST00000609606 ORC3Q9UBD5 711 aaPredicted RBP17.21■□□□□ 0.35
CSNK2A1-209ENST00000609606 DDX20Q9UHI6 824 aaKnown RBP17.21■□□□□ 0.35
CSNK2A1-209ENST00000609606 SGPL1O95470 568 aa17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 FOSP01100 380 aaPredicted RBP17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 NR3C2P08235 984 aa17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 FDPSP14324 419 aaKnown RBP17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 AKR1A1P14550 325 aa17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 EIF2AK2P19525 551 aaKnown RBP17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 CNGA1P29973 690 aa17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 STXBP2Q15833 593 aa17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 LHX8Q68G74 356 aa17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 MCTP2Q6DN12 878 aa17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 GALNT17Q6IS24 598 aa17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 CCDC83Q8IWF9 413 aa17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 BICD2Q8TD16 824 aa17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 U2AF1L4Q8WU68 220 aaKnown RBP17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 SHISA4Q96DD7 197 aa17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 VPS54Q9P1Q0 977 aa17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 ZHX1Q9UKY1 873 aaPredicted RBP17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 FAM184BQ9ULE4 1060 aa17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 DDX49Q9Y6V7 483 aaKnown RBP17.2■□□□□ 0.34
CSNK2A1-209ENST00000609606 RBM47A0AV96 593 aaKnown RBP17.19■□□□□ 0.34
CSNK2A1-209ENST00000609606 POTEFA5A3E0 1075 aa17.19■□□□□ 0.34
CSNK2A1-209ENST00000609606 SPDYE3A6NKU9 549 aa17.19■□□□□ 0.34
CSNK2A1-209ENST00000609606 EIF3JO75822 258 aaKnown RBP17.19■□□□□ 0.34
CSNK2A1-209ENST00000609606 CLK2P49760 499 aaKnown RBP17.19■□□□□ 0.34
CSNK2A1-209ENST00000609606 AP3B2Q13367 1082 aa17.19■□□□□ 0.34
CSNK2A1-209ENST00000609606 PGM5Q15124 567 aa17.19■□□□□ 0.34
CSNK2A1-209ENST00000609606 UBE2SQ16763 222 aa17.19■□□□□ 0.34
CSNK2A1-209ENST00000609606 CCDC144BQ3MJ40 725 aa17.19■□□□□ 0.34
CSNK2A1-209ENST00000609606 TAPT1Q6NXT6 567 aa17.19■□□□□ 0.34
CSNK2A1-209ENST00000609606 XRRA1Q6P2D8 792 aa17.19■□□□□ 0.34
CSNK2A1-209ENST00000609606 VSIG10LQ86VR7 867 aa17.19■□□□□ 0.34
CSNK2A1-209ENST00000609606 TMX3Q96JJ7 454 aa17.19■□□□□ 0.34
CSNK2A1-209ENST00000609606 OGDHLQ9ULD0 1010 aa17.19■□□□□ 0.34
CSNK2A1-209ENST00000609606 JAK2O60674 1132 aa17.18■□□□□ 0.34
CSNK2A1-209ENST00000609606 STAM2O75886 525 aa17.18■□□□□ 0.34
CSNK2A1-209ENST00000609606 XBP1P17861 261 aa17.18■□□□□ 0.34
CSNK2A1-209ENST00000609606 CCND2P30279 289 aa17.18■□□□□ 0.34
CSNK2A1-209ENST00000609606 HMGN5P82970 282 aaKnown RBP17.18■□□□□ 0.34
CSNK2A1-209ENST00000609606 IQSEC1Q6DN90 963 aa17.18■□□□□ 0.34
CSNK2A1-209ENST00000609606 FBXO16Q8IX29 292 aaPredicted RBP17.18■□□□□ 0.34
CSNK2A1-209ENST00000609606 REXO1Q8N1G1 1221 aaKnown RBP17.18■□□□□ 0.34
CSNK2A1-209ENST00000609606 DAGLBQ8NCG7 672 aa17.18■□□□□ 0.34
CSNK2A1-209ENST00000609606 AIFM3Q96NN9 605 aa17.18■□□□□ 0.34
CSNK2A1-209ENST00000609606 EHMT1Q9H9B1 1298 aa17.18■□□□□ 0.34
CSNK2A1-209ENST00000609606 PCDHA6Q9UN73 950 aa17.18■□□□□ 0.34
CSNK2A1-209ENST00000609606 PCDHA8Q9Y5H6 950 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms